Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G54650

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043547: positive regulation of GTPase activity6.26E-05
2GO:0032491: detection of molecule of fungal origin6.26E-05
3GO:0009968: negative regulation of signal transduction6.26E-05
4GO:0006897: endocytosis8.32E-05
5GO:2000028: regulation of photoperiodism, flowering1.03E-04
6GO:0002240: response to molecule of oomycetes origin1.52E-04
7GO:0009727: detection of ethylene stimulus1.52E-04
8GO:0043066: negative regulation of apoptotic process1.52E-04
9GO:0015865: purine nucleotide transport1.52E-04
10GO:0080183: response to photooxidative stress1.52E-04
11GO:0045836: positive regulation of meiotic nuclear division2.57E-04
12GO:0061158: 3'-UTR-mediated mRNA destabilization2.57E-04
13GO:0009306: protein secretion2.73E-04
14GO:0046902: regulation of mitochondrial membrane permeability3.73E-04
15GO:0045227: capsule polysaccharide biosynthetic process4.99E-04
16GO:0033358: UDP-L-arabinose biosynthetic process4.99E-04
17GO:0045927: positive regulation of growth6.32E-04
18GO:0010337: regulation of salicylic acid metabolic process7.73E-04
19GO:0002238: response to molecule of fungal origin7.73E-04
20GO:0080036: regulation of cytokinin-activated signaling pathway9.20E-04
21GO:0071470: cellular response to osmotic stress9.20E-04
22GO:0051510: regulation of unidimensional cell growth1.07E-03
23GO:0010928: regulation of auxin mediated signaling pathway1.24E-03
24GO:0010208: pollen wall assembly1.41E-03
25GO:0001558: regulation of cell growth1.41E-03
26GO:0010204: defense response signaling pathway, resistance gene-independent1.41E-03
27GO:1900426: positive regulation of defense response to bacterium1.77E-03
28GO:0048268: clathrin coat assembly1.77E-03
29GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.77E-03
30GO:0009682: induced systemic resistance2.17E-03
31GO:0009089: lysine biosynthetic process via diaminopimelate2.17E-03
32GO:0018105: peptidyl-serine phosphorylation2.44E-03
33GO:0018107: peptidyl-threonine phosphorylation2.58E-03
34GO:0002237: response to molecule of bacterial origin2.80E-03
35GO:0009225: nucleotide-sugar metabolic process3.03E-03
36GO:0009901: anther dehiscence3.03E-03
37GO:0046688: response to copper ion3.03E-03
38GO:0009863: salicylic acid mediated signaling pathway3.49E-03
39GO:0006825: copper ion transport3.74E-03
40GO:0043622: cortical microtubule organization3.74E-03
41GO:0051321: meiotic cell cycle3.98E-03
42GO:0071456: cellular response to hypoxia4.24E-03
43GO:0006012: galactose metabolic process4.50E-03
44GO:0071369: cellular response to ethylene stimulus4.50E-03
45GO:0010584: pollen exine formation4.76E-03
46GO:0042127: regulation of cell proliferation4.76E-03
47GO:0008360: regulation of cell shape5.59E-03
48GO:0010182: sugar mediated signaling pathway5.59E-03
49GO:0009749: response to glucose6.17E-03
50GO:0006952: defense response7.03E-03
51GO:0006904: vesicle docking involved in exocytosis7.70E-03
52GO:0010200: response to chitin8.04E-03
53GO:0042742: defense response to bacterium8.89E-03
54GO:0000160: phosphorelay signal transduction system1.04E-02
55GO:0010043: response to zinc ion1.11E-02
56GO:0015031: protein transport1.21E-02
57GO:0006855: drug transmembrane transport1.58E-02
58GO:0042538: hyperosmotic salinity response1.67E-02
59GO:0009736: cytokinin-activated signaling pathway1.75E-02
60GO:0009620: response to fungus2.11E-02
61GO:0009624: response to nematode2.25E-02
62GO:0007165: signal transduction2.25E-02
63GO:0009737: response to abscisic acid2.31E-02
64GO:0055085: transmembrane transport2.60E-02
65GO:0010150: leaf senescence3.33E-02
66GO:0006470: protein dephosphorylation3.66E-02
67GO:0009617: response to bacterium3.77E-02
68GO:0009414: response to water deprivation4.03E-02
RankGO TermAdjusted P value
1GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
2GO:0005212: structural constituent of eye lens0.00E+00
3GO:0010285: L,L-diaminopimelate aminotransferase activity6.26E-05
4GO:0016531: copper chaperone activity2.57E-04
5GO:0050373: UDP-arabinose 4-epimerase activity4.99E-04
6GO:0004930: G-protein coupled receptor activity4.99E-04
7GO:0005471: ATP:ADP antiporter activity6.32E-04
8GO:0070696: transmembrane receptor protein serine/threonine kinase binding6.32E-04
9GO:0042626: ATPase activity, coupled to transmembrane movement of substances6.53E-04
10GO:0015631: tubulin binding9.20E-04
11GO:0009927: histidine phosphotransfer kinase activity9.20E-04
12GO:0003978: UDP-glucose 4-epimerase activity9.20E-04
13GO:0003730: mRNA 3'-UTR binding9.20E-04
14GO:0005545: 1-phosphatidylinositol binding1.96E-03
15GO:0008559: xenobiotic-transporting ATPase activity2.17E-03
16GO:0016874: ligase activity2.24E-03
17GO:0043424: protein histidine kinase binding3.74E-03
18GO:0030276: clathrin binding5.59E-03
19GO:0043531: ADP binding6.87E-03
20GO:0008483: transaminase activity7.70E-03
21GO:0008375: acetylglucosaminyltransferase activity9.01E-03
22GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.01E-02
23GO:0015238: drug transmembrane transporter activity1.04E-02
24GO:0005096: GTPase activator activity1.04E-02
25GO:0004842: ubiquitin-protein transferase activity1.34E-02
26GO:0051537: 2 iron, 2 sulfur cluster binding1.50E-02
27GO:0015035: protein disulfide oxidoreductase activity2.30E-02
28GO:0004252: serine-type endopeptidase activity2.85E-02
29GO:0030170: pyridoxal phosphate binding2.85E-02
30GO:0008565: protein transporter activity3.01E-02
31GO:0015297: antiporter activity3.22E-02
32GO:0005509: calcium ion binding3.81E-02
33GO:0044212: transcription regulatory region DNA binding4.13E-02
34GO:0003824: catalytic activity4.53E-02
35GO:0005215: transporter activity4.56E-02
RankGO TermAdjusted P value
1GO:0030054: cell junction0.00E+00
2GO:0000813: ESCRT I complex6.32E-04
3GO:0031463: Cul3-RING ubiquitin ligase complex7.73E-04
4GO:0055028: cortical microtubule1.96E-03
5GO:0005740: mitochondrial envelope1.96E-03
6GO:0005578: proteinaceous extracellular matrix2.58E-03
7GO:0031012: extracellular matrix2.58E-03
8GO:0005758: mitochondrial intermembrane space3.49E-03
9GO:0005905: clathrin-coated pit3.98E-03
10GO:0030136: clathrin-coated vesicle5.03E-03
11GO:0071944: cell periphery7.07E-03
12GO:0032580: Golgi cisterna membrane7.38E-03
13GO:0000325: plant-type vacuole1.11E-02
14GO:0005856: cytoskeleton1.54E-02
15GO:0010008: endosome membrane2.02E-02
16GO:0012505: endomembrane system2.21E-02
17GO:0016021: integral component of membrane2.74E-02
18GO:0016020: membrane2.91E-02
19GO:0005634: nucleus4.32E-02
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Gene type



Gene DE type