Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G54090

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042966: biotin carboxyl carrier protein biosynthetic process0.00E+00
2GO:0090548: response to nitrate starvation5.43E-06
3GO:1902025: nitrate import5.43E-06
4GO:0043693: monoterpene biosynthetic process2.75E-05
5GO:0015937: coenzyme A biosynthetic process1.46E-04
6GO:0033386: geranylgeranyl diphosphate biosynthetic process1.70E-04
7GO:0033384: geranyl diphosphate biosynthetic process2.22E-04
8GO:0045337: farnesyl diphosphate biosynthetic process2.22E-04
9GO:0008299: isoprenoid biosynthetic process5.23E-04
10GO:0009306: protein secretion6.58E-04
11GO:0016117: carotenoid biosynthetic process6.93E-04
12GO:0010051: xylem and phloem pattern formation7.29E-04
13GO:0080156: mitochondrial mRNA modification8.75E-04
14GO:0006464: cellular protein modification process9.89E-04
15GO:0006904: vesicle docking involved in exocytosis1.03E-03
16GO:0009926: auxin polar transport1.81E-03
17GO:0010224: response to UV-B2.27E-03
18GO:0009451: RNA modification4.13E-03
19GO:0010228: vegetative to reproductive phase transition of meristem4.19E-03
20GO:0009793: embryo development ending in seed dormancy4.60E-03
21GO:0006397: mRNA processing8.58E-03
22GO:0006508: proteolysis4.59E-02
RankGO TermAdjusted P value
1GO:0004077: biotin-[acetyl-CoA-carboxylase] ligase activity0.00E+00
2GO:0004078: biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity0.00E+00
3GO:0017046: peptide hormone binding0.00E+00
4GO:0004632: phosphopantothenate--cysteine ligase activity5.43E-06
5GO:0042277: peptide binding5.99E-05
6GO:0003989: acetyl-CoA carboxylase activity7.90E-05
7GO:0004311: farnesyltranstransferase activity1.70E-04
8GO:0004337: geranyltranstransferase activity2.22E-04
9GO:0004161: dimethylallyltranstransferase activity3.06E-04
10GO:0004519: endonuclease activity6.42E-04
11GO:0003824: catalytic activity2.20E-03
12GO:0008234: cysteine-type peptidase activity2.37E-03
13GO:0003924: GTPase activity8.33E-03
14GO:0003723: RNA binding1.55E-02
15GO:0005525: GTP binding1.78E-02
16GO:0046983: protein dimerization activity2.53E-02
RankGO TermAdjusted P value
1GO:0009536: plastid1.19E-05
2GO:0009513: etioplast1.49E-05
3GO:0009507: chloroplast3.17E-03
4GO:0009543: chloroplast thylakoid lumen3.26E-03
5GO:0009941: chloroplast envelope9.33E-03
6GO:0000139: Golgi membrane2.56E-02
7GO:0009535: chloroplast thylakoid membrane3.66E-02
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Gene type



Gene DE type