co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G53020

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:0006907: pinocytosis	0.00E+00
3	GO:0045014: negative regulation of transcription by glucose	0.00E+00
4	GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA	0.00E+00
5	GO:0061062: regulation of nematode larval development	4.22E-06
6	GO:0009686: gibberellin biosynthetic process	1.95E-04
7	GO:0010070: zygote asymmetric cell division	3.04E-04
8	GO:0043686: co-translational protein modification	3.04E-04
9	GO:0051013: microtubule severing	3.04E-04
10	GO:0045786: negative regulation of cell cycle	3.04E-04
11	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.04E-04
12	GO:0007186: G-protein coupled receptor signaling pathway	3.80E-04
13	GO:0010069: zygote asymmetric cytokinesis in embryo sac	6.66E-04
14	GO:0009733: response to auxin	6.69E-04
15	GO:0009887: animal organ morphogenesis	1.06E-03
16	GO:0048575: short-day photoperiodism, flowering	1.08E-03
17	GO:0090506: axillary shoot meristem initiation	1.08E-03
18	GO:0034090: maintenance of meiotic sister chromatid cohesion	1.08E-03
19	GO:0006518: peptide metabolic process	1.08E-03
20	GO:0009825: multidimensional cell growth	1.18E-03
21	GO:0006863: purine nucleobase transport	1.31E-03
22	GO:0010321: regulation of vegetative phase change	1.55E-03
23	GO:0007276: gamete generation	1.55E-03
24	GO:0009956: radial pattern formation	2.07E-03
25	GO:0048629: trichome patterning	2.07E-03
26	GO:0042991: transcription factor import into nucleus	2.07E-03
27	GO:0031365: N-terminal protein amino acid modification	2.65E-03
28	GO:0009107: lipoate biosynthetic process	2.65E-03
29	GO:0009696: salicylic acid metabolic process	2.65E-03
30	GO:0006351: transcription, DNA-templated	2.67E-03
31	GO:0010942: positive regulation of cell death	3.27E-03
32	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	3.27E-03
33	GO:0003006: developmental process involved in reproduction	3.27E-03
34	GO:0009740: gibberellic acid mediated signaling pathway	3.51E-03
35	GO:0048366: leaf development	3.75E-03
36	GO:0019760: glucosinolate metabolic process	4.30E-03
37	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.64E-03
38	GO:0007050: cell cycle arrest	4.64E-03
39	GO:0009704: de-etiolation	5.39E-03
40	GO:0010492: maintenance of shoot apical meristem identity	5.39E-03
41	GO:0009231: riboflavin biosynthetic process	5.39E-03
42	GO:0042255: ribosome assembly	5.39E-03
43	GO:0006353: DNA-templated transcription, termination	5.39E-03
44	GO:0045892: negative regulation of transcription, DNA-templated	5.47E-03
45	GO:0000373: Group II intron splicing	7.01E-03
46	GO:0048589: developmental growth	7.01E-03
47	GO:0009056: catabolic process	7.01E-03
48	GO:0048507: meristem development	7.01E-03
49	GO:0016567: protein ubiquitination	7.15E-03
50	GO:0040008: regulation of growth	7.17E-03
51	GO:0006811: ion transport	7.38E-03
52	GO:0048364: root development	7.83E-03
53	GO:0009641: shade avoidance	8.77E-03
54	GO:0009870: defense response signaling pathway, resistance gene-dependent	8.77E-03
55	GO:0009739: response to gibberellin	8.78E-03
56	GO:0009750: response to fructose	9.71E-03
57	GO:0008285: negative regulation of cell proliferation	9.71E-03
58	GO:0005983: starch catabolic process	1.07E-02
59	GO:0010582: floral meristem determinacy	1.07E-02
60	GO:0010152: pollen maturation	1.07E-02
61	GO:0042546: cell wall biogenesis	1.14E-02
62	GO:0010102: lateral root morphogenesis	1.17E-02
63	GO:0009734: auxin-activated signaling pathway	1.23E-02
64	GO:0010223: secondary shoot formation	1.27E-02
65	GO:0010540: basipetal auxin transport	1.27E-02
66	GO:0006302: double-strand break repair	1.27E-02
67	GO:0048768: root hair cell tip growth	1.27E-02
68	GO:0048467: gynoecium development	1.27E-02
69	GO:0009933: meristem structural organization	1.27E-02
70	GO:0010207: photosystem II assembly	1.27E-02
71	GO:0009969: xyloglucan biosynthetic process	1.38E-02
72	GO:0080188: RNA-directed DNA methylation	1.38E-02
73	GO:0006874: cellular calcium ion homeostasis	1.72E-02
74	GO:0043622: cortical microtubule organization	1.72E-02
75	GO:0009416: response to light stimulus	1.75E-02
76	GO:0016114: terpenoid biosynthetic process	1.84E-02
77	GO:0006306: DNA methylation	1.84E-02
78	GO:0051321: meiotic cell cycle	1.84E-02
79	GO:0051301: cell division	1.99E-02
80	GO:0001944: vasculature development	2.09E-02
81	GO:0071215: cellular response to abscisic acid stimulus	2.09E-02
82	GO:0009624: response to nematode	2.11E-02
83	GO:0042127: regulation of cell proliferation	2.22E-02
84	GO:0048443: stamen development	2.22E-02
85	GO:0010091: trichome branching	2.22E-02
86	GO:0000271: polysaccharide biosynthetic process	2.48E-02
87	GO:0048653: anther development	2.48E-02
88	GO:0000226: microtubule cytoskeleton organization	2.48E-02
89	GO:0010182: sugar mediated signaling pathway	2.62E-02
90	GO:0045489: pectin biosynthetic process	2.62E-02
91	GO:0010305: leaf vascular tissue pattern formation	2.62E-02
92	GO:0009958: positive gravitropism	2.62E-02
93	GO:0006355: regulation of transcription, DNA-templated	2.64E-02
94	GO:0048825: cotyledon development	2.90E-02
95	GO:0009749: response to glucose	2.90E-02
96	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.04E-02
97	GO:0071554: cell wall organization or biogenesis	3.04E-02
98	GO:0002229: defense response to oomycetes	3.04E-02
99	GO:0032502: developmental process	3.19E-02
100	GO:0031047: gene silencing by RNA	3.19E-02
101	GO:0006464: cellular protein modification process	3.49E-02
102	GO:0009567: double fertilization forming a zygote and endosperm	3.49E-02
103	GO:0009639: response to red or far red light	3.49E-02
104	GO:0000910: cytokinesis	3.79E-02
105	GO:0016126: sterol biosynthetic process	3.95E-02
106	GO:0006470: protein dephosphorylation	4.17E-02
107	GO:0009627: systemic acquired resistance	4.27E-02
108	GO:0048573: photoperiodism, flowering	4.44E-02
109	GO:0010411: xyloglucan metabolic process	4.44E-02
110	GO:0009817: defense response to fungus, incompatible interaction	4.77E-02
111	GO:0009832: plant-type cell wall biogenesis	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
2	GO:0009899: ent-kaurene synthase activity	0.00E+00
3	GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity	0.00E+00
4	GO:0042586: peptide deformylase activity	3.04E-04
5	GO:0008568: microtubule-severing ATPase activity	3.04E-04
6	GO:0017022: myosin binding	6.66E-04
7	GO:0017118: lipoyltransferase activity	6.66E-04
8	GO:0010296: prenylcysteine methylesterase activity	6.66E-04
9	GO:0016415: octanoyltransferase activity	6.66E-04
10	GO:0008805: carbon-monoxide oxygenase activity	6.66E-04
11	GO:0019156: isoamylase activity	6.66E-04
12	GO:0016707: gibberellin 3-beta-dioxygenase activity	1.08E-03
13	GO:0004871: signal transducer activity	1.35E-03
14	GO:0080031: methyl salicylate esterase activity	1.55E-03
15	GO:0045544: gibberellin 20-oxidase activity	1.55E-03
16	GO:0005345: purine nucleobase transmembrane transporter activity	1.60E-03
17	GO:0010011: auxin binding	2.07E-03
18	GO:0004930: G-protein coupled receptor activity	2.07E-03
19	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.65E-03
20	GO:0080030: methyl indole-3-acetate esterase activity	3.27E-03
21	GO:0004709: MAP kinase kinase kinase activity	3.27E-03
22	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	3.27E-03
23	GO:0030332: cyclin binding	3.27E-03
24	GO:0004556: alpha-amylase activity	3.27E-03
25	GO:0016832: aldehyde-lyase activity	3.93E-03
26	GO:0043565: sequence-specific DNA binding	4.10E-03
27	GO:0004722: protein serine/threonine phosphatase activity	6.14E-03
28	GO:0004712: protein serine/threonine/tyrosine kinase activity	9.27E-03
29	GO:0008378: galactosyltransferase activity	1.07E-02
30	GO:0004970: ionotropic glutamate receptor activity	1.38E-02
31	GO:0005217: intracellular ligand-gated ion channel activity	1.38E-02
32	GO:0003712: transcription cofactor activity	1.38E-02
33	GO:0008134: transcription factor binding	1.60E-02
34	GO:0033612: receptor serine/threonine kinase binding	1.84E-02
35	GO:0008408: 3'-5' exonuclease activity	1.84E-02
36	GO:0010333: terpene synthase activity	1.84E-02
37	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.96E-02
38	GO:0003727: single-stranded RNA binding	2.22E-02
39	GO:0042803: protein homodimerization activity	2.32E-02
40	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.55E-02
41	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	2.62E-02
42	GO:0016853: isomerase activity	2.76E-02
43	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.01E-02
44	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.04E-02
45	GO:0004518: nuclease activity	3.19E-02
46	GO:0005516: calmodulin binding	3.20E-02
47	GO:0016759: cellulose synthase activity	3.49E-02
48	GO:0016413: O-acetyltransferase activity	3.79E-02
49	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.44E-02
50	GO:0004721: phosphoprotein phosphatase activity	4.44E-02
51	GO:0016301: kinase activity	4.49E-02
52	GO:0008236: serine-type peptidase activity	4.60E-02
53	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.60E-02
54	GO:0005096: GTPase activator activity	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0009349: riboflavin synthase complex	0.00E+00
2	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
3	GO:0000791: euchromatin	3.04E-04
4	GO:0030870: Mre11 complex	6.66E-04
5	GO:0009569: chloroplast starch grain	6.66E-04
6	GO:0009531: secondary cell wall	1.55E-03
7	GO:0000795: synaptonemal complex	2.65E-03
8	GO:0042644: chloroplast nucleoid	7.01E-03
9	GO:0005875: microtubule associated complex	1.49E-02
10	GO:0000419: DNA-directed RNA polymerase V complex	1.49E-02
11	GO:0009532: plastid stroma	1.84E-02
12	GO:0009504: cell plate	2.90E-02
13	GO:0016592: mediator complex	3.19E-02
14	GO:0000785: chromatin	3.19E-02
15	GO:0046658: anchored component of plasma membrane	4.81E-02