Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G52820

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0097222: mitochondrial mRNA polyadenylation0.00E+00
2GO:0036503: ERAD pathway0.00E+00
3GO:0006488: dolichol-linked oligosaccharide biosynthetic process0.00E+00
4GO:0002191: cap-dependent translational initiation0.00E+00
5GO:0006511: ubiquitin-dependent protein catabolic process1.90E-07
6GO:0071786: endoplasmic reticulum tubular network organization2.91E-06
7GO:0030163: protein catabolic process2.96E-05
8GO:1900424: regulation of defense response to bacterium7.58E-05
9GO:0050688: regulation of defense response to virus1.81E-04
10GO:0035335: peptidyl-tyrosine dephosphorylation1.81E-04
11GO:2000072: regulation of defense response to fungus, incompatible interaction1.81E-04
12GO:0031124: mRNA 3'-end processing1.81E-04
13GO:0009651: response to salt stress3.05E-04
14GO:0048577: negative regulation of short-day photoperiodism, flowering4.41E-04
15GO:0070676: intralumenal vesicle formation4.41E-04
16GO:0002679: respiratory burst involved in defense response4.41E-04
17GO:0033320: UDP-D-xylose biosynthetic process5.87E-04
18GO:0033356: UDP-L-arabinose metabolic process5.87E-04
19GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process7.62E-04
20GO:0050665: hydrogen peroxide biosynthetic process9.07E-04
21GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly9.07E-04
22GO:0001731: formation of translation preinitiation complex9.07E-04
23GO:0048827: phyllome development9.07E-04
24GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation9.07E-04
25GO:0043248: proteasome assembly9.07E-04
26GO:0042732: D-xylose metabolic process9.07E-04
27GO:0042176: regulation of protein catabolic process9.07E-04
28GO:0047484: regulation of response to osmotic stress9.07E-04
29GO:0009612: response to mechanical stimulus1.08E-03
30GO:0009854: oxidative photosynthetic carbon pathway1.08E-03
31GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.08E-03
32GO:0046686: response to cadmium ion1.19E-03
33GO:0050821: protein stabilization1.46E-03
34GO:0006491: N-glycan processing1.46E-03
35GO:0048766: root hair initiation1.46E-03
36GO:0009932: cell tip growth1.66E-03
37GO:0006379: mRNA cleavage1.87E-03
38GO:0043067: regulation of programmed cell death2.09E-03
39GO:0006486: protein glycosylation2.14E-03
40GO:0051603: proteolysis involved in cellular protein catabolic process2.22E-03
41GO:0072593: reactive oxygen species metabolic process2.56E-03
42GO:0048765: root hair cell differentiation2.56E-03
43GO:0006378: mRNA polyadenylation2.56E-03
44GO:0046856: phosphatidylinositol dephosphorylation2.56E-03
45GO:0006790: sulfur compound metabolic process2.80E-03
46GO:0007034: vacuolar transport3.32E-03
47GO:0006446: regulation of translational initiation3.32E-03
48GO:0046854: phosphatidylinositol phosphorylation3.59E-03
49GO:0010053: root epidermal cell differentiation3.59E-03
50GO:0009225: nucleotide-sugar metabolic process3.59E-03
51GO:0034976: response to endoplasmic reticulum stress3.86E-03
52GO:0006487: protein N-linked glycosylation4.15E-03
53GO:0010187: negative regulation of seed germination4.15E-03
54GO:0010431: seed maturation4.73E-03
55GO:0006413: translational initiation4.86E-03
56GO:0030433: ubiquitin-dependent ERAD pathway5.03E-03
57GO:0080092: regulation of pollen tube growth5.03E-03
58GO:0009789: positive regulation of abscisic acid-activated signaling pathway5.98E-03
59GO:0034220: ion transmembrane transport6.31E-03
60GO:0010154: fruit development6.64E-03
61GO:0010183: pollen tube guidance7.34E-03
62GO:0000302: response to reactive oxygen species7.69E-03
63GO:0009816: defense response to bacterium, incompatible interaction1.03E-02
64GO:0016192: vesicle-mediated transport1.05E-02
65GO:0030244: cellulose biosynthetic process1.20E-02
66GO:0045454: cell redox homeostasis1.20E-02
67GO:0009817: defense response to fungus, incompatible interaction1.20E-02
68GO:0042742: defense response to bacterium1.23E-02
69GO:0009832: plant-type cell wall biogenesis1.24E-02
70GO:0010043: response to zinc ion1.33E-02
71GO:0009910: negative regulation of flower development1.33E-02
72GO:0045087: innate immune response1.42E-02
73GO:0009867: jasmonic acid mediated signaling pathway1.42E-02
74GO:0034599: cellular response to oxidative stress1.46E-02
75GO:0009926: auxin polar transport1.70E-02
76GO:0000165: MAPK cascade1.94E-02
77GO:0009846: pollen germination1.99E-02
78GO:0006417: regulation of translation2.25E-02
79GO:0009908: flower development2.38E-02
80GO:0009735: response to cytokinin2.41E-02
81GO:0048316: seed development2.42E-02
82GO:0009626: plant-type hypersensitive response2.47E-02
83GO:0009555: pollen development2.63E-02
84GO:0006396: RNA processing2.75E-02
85GO:0006457: protein folding3.40E-02
86GO:0042744: hydrogen peroxide catabolic process3.47E-02
87GO:0009793: embryo development ending in seed dormancy3.51E-02
88GO:0009790: embryo development3.53E-02
89GO:0010228: vegetative to reproductive phase transition of meristem4.11E-02
90GO:0006470: protein dephosphorylation4.37E-02
91GO:0009617: response to bacterium4.51E-02
92GO:0006508: proteolysis4.97E-02
RankGO TermAdjusted P value
1GO:0004583: dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity0.00E+00
2GO:0098808: mRNA cap binding0.00E+00
3GO:0004298: threonine-type endopeptidase activity8.68E-08
4GO:0008233: peptidase activity1.65E-05
5GO:0004190: aspartic-type endopeptidase activity1.75E-04
6GO:0051879: Hsp90 protein binding1.81E-04
7GO:0051731: polynucleotide 5'-hydroxyl-kinase activity1.81E-04
8GO:0004725: protein tyrosine phosphatase activity1.97E-04
9GO:0000030: mannosyltransferase activity3.05E-04
10GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity3.05E-04
11GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity4.41E-04
12GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity4.41E-04
13GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity4.41E-04
14GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity4.41E-04
15GO:0008891: glycolate oxidase activity5.87E-04
16GO:0046527: glucosyltransferase activity5.87E-04
17GO:0016688: L-ascorbate peroxidase activity9.07E-04
18GO:0036402: proteasome-activating ATPase activity9.07E-04
19GO:0048040: UDP-glucuronate decarboxylase activity9.07E-04
20GO:0004130: cytochrome-c peroxidase activity9.07E-04
21GO:0031593: polyubiquitin binding9.07E-04
22GO:0004559: alpha-mannosidase activity1.08E-03
23GO:0070403: NAD+ binding1.08E-03
24GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.08E-03
25GO:0004722: protein serine/threonine phosphatase activity2.09E-03
26GO:0030234: enzyme regulator activity2.32E-03
27GO:0008327: methyl-CpG binding2.56E-03
28GO:0017025: TBP-class protein binding3.59E-03
29GO:0043130: ubiquitin binding4.15E-03
30GO:0016887: ATPase activity4.21E-03
31GO:0043424: protein histidine kinase binding4.43E-03
32GO:0004540: ribonuclease activity4.73E-03
33GO:0003756: protein disulfide isomerase activity5.66E-03
34GO:0047134: protein-disulfide reductase activity5.98E-03
35GO:0003743: translation initiation factor activity6.09E-03
36GO:0004791: thioredoxin-disulfide reductase activity6.99E-03
37GO:0010181: FMN binding6.99E-03
38GO:0015250: water channel activity9.95E-03
39GO:0004721: phosphoprotein phosphatase activity1.12E-02
40GO:0051082: unfolded protein binding2.69E-02
41GO:0016787: hydrolase activity3.19E-02
42GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding3.47E-02
43GO:0030246: carbohydrate binding3.54E-02
44GO:0005509: calcium ion binding4.88E-02
RankGO TermAdjusted P value
1GO:0019867: outer membrane0.00E+00
2GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
3GO:0000502: proteasome complex1.76E-12
4GO:0005783: endoplasmic reticulum4.49E-09
5GO:0005839: proteasome core complex8.68E-08
6GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane2.67E-07
7GO:0071782: endoplasmic reticulum tubular network2.91E-06
8GO:0005829: cytosol3.87E-05
9GO:0019773: proteasome core complex, alpha-subunit complex4.70E-05
10GO:0005788: endoplasmic reticulum lumen4.73E-05
11GO:0009510: plasmodesmatal desmotubule7.58E-05
12GO:0008541: proteasome regulatory particle, lid subcomplex1.01E-04
13GO:0005789: endoplasmic reticulum membrane2.46E-04
14GO:0005838: proteasome regulatory particle3.05E-04
15GO:0005849: mRNA cleavage factor complex4.41E-04
16GO:0030660: Golgi-associated vesicle membrane5.87E-04
17GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane5.87E-04
18GO:0016282: eukaryotic 43S preinitiation complex9.07E-04
19GO:0033290: eukaryotic 48S preinitiation complex1.08E-03
20GO:0031597: cytosolic proteasome complex1.08E-03
21GO:0000815: ESCRT III complex1.08E-03
22GO:0031595: nuclear proteasome complex1.26E-03
23GO:0000326: protein storage vacuole1.66E-03
24GO:0008540: proteasome regulatory particle, base subcomplex2.09E-03
25GO:0005765: lysosomal membrane2.56E-03
26GO:0031307: integral component of mitochondrial outer membrane2.80E-03
27GO:0009504: cell plate7.34E-03
28GO:0016592: mediator complex8.05E-03
29GO:0032580: Golgi cisterna membrane8.79E-03
30GO:0005886: plasma membrane1.01E-02
31GO:0005773: vacuole1.02E-02
32GO:0019005: SCF ubiquitin ligase complex1.20E-02
33GO:0005737: cytoplasm1.38E-02
34GO:0005774: vacuolar membrane1.73E-02
35GO:0031966: mitochondrial membrane1.99E-02
36GO:0010008: endosome membrane2.42E-02
37GO:0022626: cytosolic ribosome2.52E-02
38GO:0009543: chloroplast thylakoid lumen3.16E-02
39GO:0005634: nucleus4.79E-02
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Gene type



Gene DE type