Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G52760

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071327: cellular response to trehalose stimulus0.00E+00
2GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
3GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
4GO:1900067: regulation of cellular response to alkaline pH0.00E+00
5GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
6GO:0015690: aluminum cation transport0.00E+00
7GO:1900367: positive regulation of defense response to insect0.00E+00
8GO:0002764: immune response-regulating signaling pathway0.00E+00
9GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
10GO:0046865: terpenoid transport0.00E+00
11GO:0010324: membrane invagination0.00E+00
12GO:0010200: response to chitin6.00E-08
13GO:0009751: response to salicylic acid3.42E-07
14GO:0010112: regulation of systemic acquired resistance1.31E-06
15GO:0060548: negative regulation of cell death1.73E-06
16GO:0009697: salicylic acid biosynthetic process3.84E-06
17GO:0006952: defense response3.84E-06
18GO:0006468: protein phosphorylation1.07E-05
19GO:0042742: defense response to bacterium2.55E-05
20GO:0010150: leaf senescence3.63E-05
21GO:0031348: negative regulation of defense response3.67E-05
22GO:0071456: cellular response to hypoxia3.67E-05
23GO:0009625: response to insect4.37E-05
24GO:0009867: jasmonic acid mediated signaling pathway6.58E-05
25GO:0006979: response to oxidative stress1.11E-04
26GO:0045227: capsule polysaccharide biosynthetic process1.41E-04
27GO:0033358: UDP-L-arabinose biosynthetic process1.41E-04
28GO:0080142: regulation of salicylic acid biosynthetic process1.41E-04
29GO:0009611: response to wounding1.70E-04
30GO:0050832: defense response to fungus2.00E-04
31GO:0010225: response to UV-C2.17E-04
32GO:0009643: photosynthetic acclimation3.06E-04
33GO:0009617: response to bacterium3.44E-04
34GO:0042372: phylloquinone biosynthetic process4.08E-04
35GO:0048508: embryonic meristem development5.06E-04
36GO:0051938: L-glutamate import5.06E-04
37GO:0015760: glucose-6-phosphate transport5.06E-04
38GO:0046256: 2,4,6-trinitrotoluene catabolic process5.06E-04
39GO:0019567: arabinose biosynthetic process5.06E-04
40GO:0010421: hydrogen peroxide-mediated programmed cell death5.06E-04
41GO:0033306: phytol metabolic process5.06E-04
42GO:1901183: positive regulation of camalexin biosynthetic process5.06E-04
43GO:0009700: indole phytoalexin biosynthetic process5.06E-04
44GO:0009270: response to humidity5.06E-04
45GO:0042759: long-chain fatty acid biosynthetic process5.06E-04
46GO:1990542: mitochondrial transmembrane transport5.06E-04
47GO:1900056: negative regulation of leaf senescence5.24E-04
48GO:0009753: response to jasmonic acid6.36E-04
49GO:0042391: regulation of membrane potential7.25E-04
50GO:0051707: response to other organism7.74E-04
51GO:2000031: regulation of salicylic acid mediated signaling pathway7.96E-04
52GO:0010120: camalexin biosynthetic process7.96E-04
53GO:0009646: response to absence of light8.74E-04
54GO:0090333: regulation of stomatal closure9.51E-04
55GO:0010193: response to ozone1.04E-03
56GO:0015802: basic amino acid transport1.09E-03
57GO:0010618: aerenchyma formation1.09E-03
58GO:0080181: lateral root branching1.09E-03
59GO:0010115: regulation of abscisic acid biosynthetic process1.09E-03
60GO:0010271: regulation of chlorophyll catabolic process1.09E-03
61GO:0044419: interspecies interaction between organisms1.09E-03
62GO:0009945: radial axis specification1.09E-03
63GO:0019725: cellular homeostasis1.09E-03
64GO:0015712: hexose phosphate transport1.09E-03
65GO:0051258: protein polymerization1.09E-03
66GO:0043091: L-arginine import1.09E-03
67GO:0015914: phospholipid transport1.09E-03
68GO:0006123: mitochondrial electron transport, cytochrome c to oxygen1.09E-03
69GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.09E-03
70GO:0009838: abscission1.09E-03
71GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.12E-03
72GO:1900426: positive regulation of defense response to bacterium1.12E-03
73GO:0006486: protein glycosylation1.21E-03
74GO:0009737: response to abscisic acid1.22E-03
75GO:0012501: programmed cell death1.73E-03
76GO:0009626: plant-type hypersensitive response1.73E-03
77GO:0015692: lead ion transport1.78E-03
78GO:0015695: organic cation transport1.78E-03
79GO:0015714: phosphoenolpyruvate transport1.78E-03
80GO:0080168: abscisic acid transport1.78E-03
81GO:1900055: regulation of leaf senescence1.78E-03
82GO:0006954: inflammatory response1.78E-03
83GO:0010498: proteasomal protein catabolic process1.78E-03
84GO:0034051: negative regulation of plant-type hypersensitive response1.78E-03
85GO:0016045: detection of bacterium1.78E-03
86GO:1900140: regulation of seedling development1.78E-03
87GO:0010359: regulation of anion channel activity1.78E-03
88GO:0009816: defense response to bacterium, incompatible interaction1.78E-03
89GO:0035436: triose phosphate transmembrane transport1.78E-03
90GO:0045793: positive regulation of cell size1.78E-03
91GO:0010186: positive regulation of cellular defense response1.78E-03
92GO:0009620: response to fungus1.81E-03
93GO:0009266: response to temperature stimulus2.22E-03
94GO:0009225: nucleotide-sugar metabolic process2.49E-03
95GO:0072583: clathrin-dependent endocytosis2.58E-03
96GO:0015696: ammonium transport2.58E-03
97GO:0051289: protein homotetramerization2.58E-03
98GO:0002679: respiratory burst involved in defense response2.58E-03
99GO:0046513: ceramide biosynthetic process2.58E-03
100GO:0046836: glycolipid transport2.58E-03
101GO:0048194: Golgi vesicle budding2.58E-03
102GO:0009407: toxin catabolic process2.64E-03
103GO:0010119: regulation of stomatal movement2.80E-03
104GO:0007165: signal transduction2.93E-03
105GO:2000377: regulation of reactive oxygen species metabolic process3.08E-03
106GO:0010483: pollen tube reception3.48E-03
107GO:0048638: regulation of developmental growth3.48E-03
108GO:0009652: thigmotropism3.48E-03
109GO:0072488: ammonium transmembrane transport3.48E-03
110GO:0010508: positive regulation of autophagy3.48E-03
111GO:0015713: phosphoglycerate transport3.48E-03
112GO:1901141: regulation of lignin biosynthetic process3.48E-03
113GO:0010109: regulation of photosynthesis3.48E-03
114GO:2000022: regulation of jasmonic acid mediated signaling pathway4.09E-03
115GO:0034052: positive regulation of plant-type hypersensitive response4.46E-03
116GO:0009164: nucleoside catabolic process4.46E-03
117GO:0006012: galactose metabolic process4.47E-03
118GO:0009636: response to toxic substance5.07E-03
119GO:0006855: drug transmembrane transport5.32E-03
120GO:0010264: myo-inositol hexakisphosphate biosynthetic process5.53E-03
121GO:1900425: negative regulation of defense response to bacterium5.53E-03
122GO:0010337: regulation of salicylic acid metabolic process5.53E-03
123GO:0009117: nucleotide metabolic process5.53E-03
124GO:0006574: valine catabolic process5.53E-03
125GO:0018258: protein O-linked glycosylation via hydroxyproline5.53E-03
126GO:0002238: response to molecule of fungal origin5.53E-03
127GO:0009759: indole glucosinolate biosynthetic process5.53E-03
128GO:0010942: positive regulation of cell death5.53E-03
129GO:0010405: arabinogalactan protein metabolic process5.53E-03
130GO:0031347: regulation of defense response5.58E-03
131GO:0006470: protein dephosphorylation5.92E-03
132GO:0007166: cell surface receptor signaling pathway5.92E-03
133GO:0010310: regulation of hydrogen peroxide metabolic process6.67E-03
134GO:0045926: negative regulation of growth6.67E-03
135GO:0009612: response to mechanical stimulus6.67E-03
136GO:0009942: longitudinal axis specification6.67E-03
137GO:0009749: response to glucose7.10E-03
138GO:0002229: defense response to oomycetes7.60E-03
139GO:0043090: amino acid import7.90E-03
140GO:0071446: cellular response to salicylic acid stimulus7.90E-03
141GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c7.90E-03
142GO:0050829: defense response to Gram-negative bacterium7.90E-03
143GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.90E-03
144GO:0009414: response to water deprivation8.47E-03
145GO:0030091: protein repair9.20E-03
146GO:0009787: regulation of abscisic acid-activated signaling pathway9.20E-03
147GO:0009819: drought recovery9.20E-03
148GO:0043068: positive regulation of programmed cell death9.20E-03
149GO:0009624: response to nematode1.00E-02
150GO:0010099: regulation of photomorphogenesis1.06E-02
151GO:0010204: defense response signaling pathway, resistance gene-independent1.06E-02
152GO:0030968: endoplasmic reticulum unfolded protein response1.06E-02
153GO:0009051: pentose-phosphate shunt, oxidative branch1.20E-02
154GO:0051865: protein autoubiquitination1.20E-02
155GO:0006098: pentose-phosphate shunt1.20E-02
156GO:0046916: cellular transition metal ion homeostasis1.20E-02
157GO:0019432: triglyceride biosynthetic process1.20E-02
158GO:0009627: systemic acquired resistance1.24E-02
159GO:0080167: response to karrikin1.30E-02
160GO:0006950: response to stress1.30E-02
161GO:0048354: mucilage biosynthetic process involved in seed coat development1.35E-02
162GO:0010380: regulation of chlorophyll biosynthetic process1.35E-02
163GO:0046777: protein autophosphorylation1.44E-02
164GO:0007064: mitotic sister chromatid cohesion1.51E-02
165GO:0006032: chitin catabolic process1.51E-02
166GO:0009832: plant-type cell wall biogenesis1.52E-02
167GO:0072593: reactive oxygen species metabolic process1.67E-02
168GO:1903507: negative regulation of nucleic acid-templated transcription1.67E-02
169GO:0048229: gametophyte development1.67E-02
170GO:0007568: aging1.67E-02
171GO:0008361: regulation of cell size1.84E-02
172GO:0002213: defense response to insect1.84E-02
173GO:0010105: negative regulation of ethylene-activated signaling pathway1.84E-02
174GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.84E-02
175GO:0016567: protein ubiquitination1.86E-02
176GO:0006829: zinc II ion transport2.02E-02
177GO:0006006: glucose metabolic process2.02E-02
178GO:0055046: microgametogenesis2.02E-02
179GO:0034605: cellular response to heat2.20E-02
180GO:0002237: response to molecule of bacterial origin2.20E-02
181GO:0007034: vacuolar transport2.20E-02
182GO:0010540: basipetal auxin transport2.20E-02
183GO:0009744: response to sucrose2.37E-02
184GO:0009969: xyloglucan biosynthetic process2.38E-02
185GO:0046688: response to copper ion2.38E-02
186GO:0010167: response to nitrate2.38E-02
187GO:0080147: root hair cell development2.77E-02
188GO:0009863: salicylic acid mediated signaling pathway2.77E-02
189GO:0006812: cation transport2.98E-02
190GO:0006825: copper ion transport2.98E-02
191GO:0009269: response to desiccation3.18E-02
192GO:0003333: amino acid transmembrane transport3.18E-02
193GO:0016998: cell wall macromolecule catabolic process3.18E-02
194GO:0010017: red or far-red light signaling pathway3.40E-02
195GO:0016226: iron-sulfur cluster assembly3.40E-02
196GO:0009561: megagametogenesis3.83E-02
197GO:0070417: cellular response to cold4.06E-02
198GO:0042147: retrograde transport, endosome to Golgi4.06E-02
199GO:0009409: response to cold4.17E-02
200GO:0010118: stomatal movement4.29E-02
201GO:0042631: cellular response to water deprivation4.29E-02
202GO:0000271: polysaccharide biosynthetic process4.29E-02
203GO:0000413: protein peptidyl-prolyl isomerization4.29E-02
204GO:0006885: regulation of pH4.53E-02
205GO:0045489: pectin biosynthetic process4.53E-02
206GO:0010197: polar nucleus fusion4.53E-02
207GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.73E-02
RankGO TermAdjusted P value
1GO:0004168: dolichol kinase activity0.00E+00
2GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
3GO:0005212: structural constituent of eye lens0.00E+00
4GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
5GO:0016301: kinase activity1.03E-06
6GO:0004674: protein serine/threonine kinase activity1.63E-06
7GO:0050373: UDP-arabinose 4-epimerase activity1.41E-04
8GO:0030552: cAMP binding2.42E-04
9GO:0030553: cGMP binding2.42E-04
10GO:0005524: ATP binding2.91E-04
11GO:0005509: calcium ion binding2.94E-04
12GO:0005216: ion channel activity3.71E-04
13GO:0004012: phospholipid-translocating ATPase activity4.08E-04
14GO:0003978: UDP-glucose 4-epimerase activity4.08E-04
15GO:0032050: clathrin heavy chain binding5.06E-04
16GO:2001227: quercitrin binding5.06E-04
17GO:0008909: isochorismate synthase activity5.06E-04
18GO:0019707: protein-cysteine S-acyltransferase activity5.06E-04
19GO:2001147: camalexin binding5.06E-04
20GO:0031127: alpha-(1,2)-fucosyltransferase activity5.06E-04
21GO:0043295: glutathione binding5.24E-04
22GO:0004714: transmembrane receptor protein tyrosine kinase activity6.54E-04
23GO:0030551: cyclic nucleotide binding7.25E-04
24GO:0005249: voltage-gated potassium channel activity7.25E-04
25GO:0019901: protein kinase binding9.55E-04
26GO:0015152: glucose-6-phosphate transmembrane transporter activity1.09E-03
27GO:0022821: potassium ion antiporter activity1.09E-03
28GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.09E-03
29GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.09E-03
30GO:0001671: ATPase activator activity1.09E-03
31GO:0004385: guanylate kinase activity1.09E-03
32GO:0048531: beta-1,3-galactosyltransferase activity1.09E-03
33GO:0050291: sphingosine N-acyltransferase activity1.09E-03
34GO:0047364: desulfoglucosinolate sulfotransferase activity1.09E-03
35GO:0004568: chitinase activity1.31E-03
36GO:0008559: xenobiotic-transporting ATPase activity1.51E-03
37GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.78E-03
38GO:0016531: copper chaperone activity1.78E-03
39GO:0071917: triose-phosphate transmembrane transporter activity1.78E-03
40GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.96E-03
41GO:0017077: oxidative phosphorylation uncoupler activity2.58E-03
42GO:0015189: L-lysine transmembrane transporter activity2.58E-03
43GO:0017089: glycolipid transporter activity2.58E-03
44GO:0015181: arginine transmembrane transporter activity2.58E-03
45GO:0043424: protein histidine kinase binding3.40E-03
46GO:0004737: pyruvate decarboxylase activity3.48E-03
47GO:0004345: glucose-6-phosphate dehydrogenase activity3.48E-03
48GO:0051861: glycolipid binding3.48E-03
49GO:0005313: L-glutamate transmembrane transporter activity3.48E-03
50GO:0019199: transmembrane receptor protein kinase activity3.48E-03
51GO:0015120: phosphoglycerate transmembrane transporter activity3.48E-03
52GO:0033612: receptor serine/threonine kinase binding3.74E-03
53GO:0019706: protein-cysteine S-palmitoyltransferase activity3.74E-03
54GO:0004364: glutathione transferase activity4.15E-03
55GO:0005496: steroid binding4.46E-03
56GO:0047631: ADP-ribose diphosphatase activity4.46E-03
57GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.46E-03
58GO:0030976: thiamine pyrophosphate binding5.53E-03
59GO:0004605: phosphatidate cytidylyltransferase activity5.53E-03
60GO:1990714: hydroxyproline O-galactosyltransferase activity5.53E-03
61GO:0000210: NAD+ diphosphatase activity5.53E-03
62GO:0008519: ammonium transmembrane transporter activity5.53E-03
63GO:0033743: peptide-methionine (R)-S-oxide reductase activity6.67E-03
64GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides6.67E-03
65GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity6.67E-03
66GO:0003950: NAD+ ADP-ribosyltransferase activity6.67E-03
67GO:0004144: diacylglycerol O-acyltransferase activity6.67E-03
68GO:0005261: cation channel activity6.67E-03
69GO:0004842: ubiquitin-protein transferase activity6.87E-03
70GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity7.90E-03
71GO:0016831: carboxy-lyase activity7.90E-03
72GO:0004672: protein kinase activity7.92E-03
73GO:0004197: cysteine-type endopeptidase activity8.13E-03
74GO:0005544: calcium-dependent phospholipid binding9.20E-03
75GO:0004033: aldo-keto reductase (NADP) activity9.20E-03
76GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.82E-03
77GO:0043531: ADP binding1.08E-02
78GO:0008417: fucosyltransferase activity1.20E-02
79GO:0071949: FAD binding1.20E-02
80GO:0016758: transferase activity, transferring hexosyl groups1.29E-02
81GO:0015174: basic amino acid transmembrane transporter activity1.35E-02
82GO:0047617: acyl-CoA hydrolase activity1.35E-02
83GO:0008171: O-methyltransferase activity1.51E-02
84GO:0015020: glucuronosyltransferase activity1.51E-02
85GO:0043565: sequence-specific DNA binding1.51E-02
86GO:0015238: drug transmembrane transporter activity1.52E-02
87GO:0008378: galactosyltransferase activity1.84E-02
88GO:0004521: endoribonuclease activity1.84E-02
89GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.85E-02
90GO:0015297: antiporter activity1.90E-02
91GO:0004722: protein serine/threonine phosphatase activity1.96E-02
92GO:0005315: inorganic phosphate transmembrane transporter activity2.02E-02
93GO:0050661: NADP binding2.10E-02
94GO:0008146: sulfotransferase activity2.38E-02
95GO:0004190: aspartic-type endopeptidase activity2.38E-02
96GO:0009055: electron carrier activity2.59E-02
97GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.73E-02
98GO:0003954: NADH dehydrogenase activity2.77E-02
99GO:0003714: transcription corepressor activity2.77E-02
100GO:0005515: protein binding2.90E-02
101GO:0051087: chaperone binding2.98E-02
102GO:0008324: cation transmembrane transporter activity2.98E-02
103GO:0004707: MAP kinase activity3.18E-02
104GO:0016298: lipase activity3.31E-02
105GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.40E-02
106GO:0000287: magnesium ion binding3.40E-02
107GO:0015171: amino acid transmembrane transporter activity3.54E-02
108GO:0005516: calmodulin binding3.71E-02
109GO:0004499: N,N-dimethylaniline monooxygenase activity3.83E-02
110GO:0005451: monovalent cation:proton antiporter activity4.29E-02
111GO:0005199: structural constituent of cell wall4.53E-02
112GO:0046873: metal ion transmembrane transporter activity4.53E-02
113GO:0004497: monooxygenase activity4.54E-02
114GO:0015299: solute:proton antiporter activity4.76E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.57E-11
2GO:0016021: integral component of membrane5.02E-10
3GO:0005901: caveola1.13E-05
4GO:0005758: mitochondrial intermembrane space3.25E-04
5GO:0000138: Golgi trans cisterna5.06E-04
6GO:0031304: intrinsic component of mitochondrial inner membrane1.09E-03
7GO:0032580: Golgi cisterna membrane1.32E-03
8GO:0042406: extrinsic component of endoplasmic reticulum membrane1.78E-03
9GO:0008287: protein serine/threonine phosphatase complex1.78E-03
10GO:0030139: endocytic vesicle1.78E-03
11GO:0009530: primary cell wall1.78E-03
12GO:0070062: extracellular exosome2.58E-03
13GO:0005794: Golgi apparatus4.11E-03
14GO:0005774: vacuolar membrane5.05E-03
15GO:0016363: nuclear matrix6.67E-03
16GO:0030125: clathrin vesicle coat1.51E-02
17GO:0000325: plant-type vacuole1.67E-02
18GO:0031012: extracellular matrix2.02E-02
19GO:0031902: late endosome membrane2.19E-02
20GO:0030176: integral component of endoplasmic reticulum membrane2.38E-02
21GO:0005769: early endosome2.58E-02
22GO:0070469: respiratory chain2.98E-02
23GO:0009506: plasmodesma3.18E-02
24GO:0005887: integral component of plasma membrane3.65E-02
25GO:0005802: trans-Golgi network4.11E-02
26GO:0000139: Golgi membrane4.17E-02
27GO:0005770: late endosome4.53E-02
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Gene type



Gene DE type