GO Enrichment Analysis of Co-expressed Genes with
AT5G52440
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098586: cellular response to virus | 0.00E+00 |
| 2 | GO:0010203: response to very low fluence red light stimulus | 0.00E+00 |
| 3 | GO:0007037: vacuolar phosphate transport | 0.00E+00 |
| 4 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 5 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 6 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 7 | GO:0015969: guanosine tetraphosphate metabolic process | 7.23E-05 |
| 8 | GO:0000012: single strand break repair | 7.23E-05 |
| 9 | GO:0010201: response to continuous far red light stimulus by the high-irradiance response system | 7.23E-05 |
| 10 | GO:0043087: regulation of GTPase activity | 7.23E-05 |
| 11 | GO:0046741: transport of virus in host, tissue to tissue | 1.74E-04 |
| 12 | GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole | 1.74E-04 |
| 13 | GO:0000256: allantoin catabolic process | 1.74E-04 |
| 14 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.74E-04 |
| 15 | GO:0031022: nuclear migration along microfilament | 2.93E-04 |
| 16 | GO:0010136: ureide catabolic process | 2.93E-04 |
| 17 | GO:0017006: protein-tetrapyrrole linkage | 2.93E-04 |
| 18 | GO:0005977: glycogen metabolic process | 2.93E-04 |
| 19 | GO:0000913: preprophase band assembly | 2.93E-04 |
| 20 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.59E-04 |
| 21 | GO:0009584: detection of visible light | 4.23E-04 |
| 22 | GO:0006145: purine nucleobase catabolic process | 4.23E-04 |
| 23 | GO:0042989: sequestering of actin monomers | 4.23E-04 |
| 24 | GO:0009226: nucleotide-sugar biosynthetic process | 4.23E-04 |
| 25 | GO:0043572: plastid fission | 4.23E-04 |
| 26 | GO:0007018: microtubule-based movement | 4.49E-04 |
| 27 | GO:0016032: viral process | 5.49E-04 |
| 28 | GO:0051322: anaphase | 5.65E-04 |
| 29 | GO:0010021: amylopectin biosynthetic process | 5.65E-04 |
| 30 | GO:0048442: sepal development | 5.65E-04 |
| 31 | GO:0000910: cytokinesis | 6.95E-04 |
| 32 | GO:0080110: sporopollenin biosynthetic process | 7.14E-04 |
| 33 | GO:0030041: actin filament polymerization | 7.14E-04 |
| 34 | GO:0009904: chloroplast accumulation movement | 7.14E-04 |
| 35 | GO:0045038: protein import into chloroplast thylakoid membrane | 7.14E-04 |
| 36 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 8.73E-04 |
| 37 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 8.73E-04 |
| 38 | GO:0010076: maintenance of floral meristem identity | 1.04E-03 |
| 39 | GO:0017148: negative regulation of translation | 1.04E-03 |
| 40 | GO:0009903: chloroplast avoidance movement | 1.04E-03 |
| 41 | GO:0009658: chloroplast organization | 1.05E-03 |
| 42 | GO:0051510: regulation of unidimensional cell growth | 1.21E-03 |
| 43 | GO:0010161: red light signaling pathway | 1.21E-03 |
| 44 | GO:0009395: phospholipid catabolic process | 1.21E-03 |
| 45 | GO:0010492: maintenance of shoot apical meristem identity | 1.40E-03 |
| 46 | GO:0046685: response to arsenic-containing substance | 1.80E-03 |
| 47 | GO:0048507: meristem development | 1.80E-03 |
| 48 | GO:0009821: alkaloid biosynthetic process | 1.80E-03 |
| 49 | GO:0010206: photosystem II repair | 1.80E-03 |
| 50 | GO:0000373: Group II intron splicing | 1.80E-03 |
| 51 | GO:0009638: phototropism | 2.01E-03 |
| 52 | GO:0009098: leucine biosynthetic process | 2.01E-03 |
| 53 | GO:0048441: petal development | 2.23E-03 |
| 54 | GO:0045037: protein import into chloroplast stroma | 2.70E-03 |
| 55 | GO:0009767: photosynthetic electron transport chain | 2.94E-03 |
| 56 | GO:0048440: carpel development | 3.19E-03 |
| 57 | GO:0010020: chloroplast fission | 3.19E-03 |
| 58 | GO:0006302: double-strand break repair | 3.19E-03 |
| 59 | GO:0090351: seedling development | 3.44E-03 |
| 60 | GO:0007010: cytoskeleton organization | 3.98E-03 |
| 61 | GO:0008299: isoprenoid biosynthetic process | 4.26E-03 |
| 62 | GO:0051302: regulation of cell division | 4.26E-03 |
| 63 | GO:0006413: translational initiation | 4.58E-03 |
| 64 | GO:0031348: negative regulation of defense response | 4.83E-03 |
| 65 | GO:0010584: pollen exine formation | 5.43E-03 |
| 66 | GO:0048443: stamen development | 5.43E-03 |
| 67 | GO:0007166: cell surface receptor signaling pathway | 5.61E-03 |
| 68 | GO:0045489: pectin biosynthetic process | 6.38E-03 |
| 69 | GO:0007059: chromosome segregation | 6.70E-03 |
| 70 | GO:0019252: starch biosynthetic process | 7.04E-03 |
| 71 | GO:0000302: response to reactive oxygen species | 7.38E-03 |
| 72 | GO:0019761: glucosinolate biosynthetic process | 7.72E-03 |
| 73 | GO:0009630: gravitropism | 7.72E-03 |
| 74 | GO:0009793: embryo development ending in seed dormancy | 8.60E-03 |
| 75 | GO:0016126: sterol biosynthetic process | 9.54E-03 |
| 76 | GO:0010029: regulation of seed germination | 9.92E-03 |
| 77 | GO:0016311: dephosphorylation | 1.11E-02 |
| 78 | GO:0018298: protein-chromophore linkage | 1.15E-02 |
| 79 | GO:0010218: response to far red light | 1.23E-02 |
| 80 | GO:0048527: lateral root development | 1.27E-02 |
| 81 | GO:0006508: proteolysis | 1.32E-02 |
| 82 | GO:0045087: innate immune response | 1.36E-02 |
| 83 | GO:0009640: photomorphogenesis | 1.63E-02 |
| 84 | GO:0042546: cell wall biogenesis | 1.67E-02 |
| 85 | GO:0009644: response to high light intensity | 1.72E-02 |
| 86 | GO:0000165: MAPK cascade | 1.86E-02 |
| 87 | GO:0005975: carbohydrate metabolic process | 1.93E-02 |
| 88 | GO:0006364: rRNA processing | 2.01E-02 |
| 89 | GO:0009585: red, far-red light phototransduction | 2.01E-02 |
| 90 | GO:0009738: abscisic acid-activated signaling pathway | 2.40E-02 |
| 91 | GO:0009058: biosynthetic process | 3.15E-02 |
| 92 | GO:0006952: defense response | 3.17E-02 |
| 93 | GO:0009845: seed germination | 3.20E-02 |
| 94 | GO:0009790: embryo development | 3.38E-02 |
| 95 | GO:0009739: response to gibberellin | 4.13E-02 |
| 96 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 4.92E-02 |
| 97 | GO:0071555: cell wall organization | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity | 0.00E+00 |
| 2 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 3 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 4 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 5 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 6 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 7 | GO:0043022: ribosome binding | 3.42E-05 |
| 8 | GO:0031516: far-red light photoreceptor activity | 7.23E-05 |
| 9 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.45E-04 |
| 10 | GO:0048531: beta-1,3-galactosyltransferase activity | 1.74E-04 |
| 11 | GO:0019156: isoamylase activity | 1.74E-04 |
| 12 | GO:0008728: GTP diphosphokinase activity | 1.74E-04 |
| 13 | GO:0004103: choline kinase activity | 1.74E-04 |
| 14 | GO:0009883: red or far-red light photoreceptor activity | 1.74E-04 |
| 15 | GO:0003861: 3-isopropylmalate dehydratase activity | 2.93E-04 |
| 16 | GO:0008020: G-protein coupled photoreceptor activity | 2.93E-04 |
| 17 | GO:0070402: NADPH binding | 2.93E-04 |
| 18 | GO:0004180: carboxypeptidase activity | 2.93E-04 |
| 19 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 4.23E-04 |
| 20 | GO:0016836: hydro-lyase activity | 5.65E-04 |
| 21 | GO:0008017: microtubule binding | 6.51E-04 |
| 22 | GO:0003785: actin monomer binding | 7.14E-04 |
| 23 | GO:0004556: alpha-amylase activity | 8.73E-04 |
| 24 | GO:0008236: serine-type peptidase activity | 9.01E-04 |
| 25 | GO:0004222: metalloendopeptidase activity | 1.04E-03 |
| 26 | GO:0016844: strictosidine synthase activity | 2.01E-03 |
| 27 | GO:0004673: protein histidine kinase activity | 2.23E-03 |
| 28 | GO:0003777: microtubule motor activity | 2.24E-03 |
| 29 | GO:0016874: ligase activity | 2.70E-03 |
| 30 | GO:0008081: phosphoric diester hydrolase activity | 2.94E-03 |
| 31 | GO:0000155: phosphorelay sensor kinase activity | 2.94E-03 |
| 32 | GO:0016491: oxidoreductase activity | 3.66E-03 |
| 33 | GO:0016887: ATPase activity | 3.90E-03 |
| 34 | GO:0015144: carbohydrate transmembrane transporter activity | 4.26E-03 |
| 35 | GO:0004672: protein kinase activity | 4.32E-03 |
| 36 | GO:0004176: ATP-dependent peptidase activity | 4.54E-03 |
| 37 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.58E-03 |
| 38 | GO:0005351: sugar:proton symporter activity | 4.80E-03 |
| 39 | GO:0003743: translation initiation factor activity | 5.73E-03 |
| 40 | GO:0042802: identical protein binding | 6.23E-03 |
| 41 | GO:0008080: N-acetyltransferase activity | 6.38E-03 |
| 42 | GO:0004527: exonuclease activity | 6.38E-03 |
| 43 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 6.59E-03 |
| 44 | GO:0050662: coenzyme binding | 6.70E-03 |
| 45 | GO:0016853: isomerase activity | 6.70E-03 |
| 46 | GO:0019901: protein kinase binding | 7.04E-03 |
| 47 | GO:0048038: quinone binding | 7.38E-03 |
| 48 | GO:0016788: hydrolase activity, acting on ester bonds | 7.73E-03 |
| 49 | GO:0005525: GTP binding | 8.71E-03 |
| 50 | GO:0008237: metallopeptidase activity | 8.79E-03 |
| 51 | GO:0005096: GTPase activator activity | 1.19E-02 |
| 52 | GO:0030145: manganese ion binding | 1.27E-02 |
| 53 | GO:0003824: catalytic activity | 1.28E-02 |
| 54 | GO:0003697: single-stranded DNA binding | 1.36E-02 |
| 55 | GO:0003993: acid phosphatase activity | 1.40E-02 |
| 56 | GO:0035091: phosphatidylinositol binding | 1.72E-02 |
| 57 | GO:0003690: double-stranded DNA binding | 2.06E-02 |
| 58 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.31E-02 |
| 59 | GO:0003779: actin binding | 2.53E-02 |
| 60 | GO:0016746: transferase activity, transferring acyl groups | 2.64E-02 |
| 61 | GO:0016829: lyase activity | 3.20E-02 |
| 62 | GO:0004252: serine-type endopeptidase activity | 3.26E-02 |
| 63 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.32E-02 |
| 64 | GO:0008565: protein transporter activity | 3.44E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.68E-11 |
| 3 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.45E-05 |
| 4 | GO:0009574: preprophase band | 1.27E-04 |
| 5 | GO:0080085: signal recognition particle, chloroplast targeting | 1.74E-04 |
| 6 | GO:0005871: kinesin complex | 3.59E-04 |
| 7 | GO:0005623: cell | 4.23E-04 |
| 8 | GO:0005874: microtubule | 1.32E-03 |
| 9 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.59E-03 |
| 10 | GO:0016604: nuclear body | 2.01E-03 |
| 11 | GO:0009941: chloroplast envelope | 2.09E-03 |
| 12 | GO:0009706: chloroplast inner membrane | 2.86E-03 |
| 13 | GO:0005938: cell cortex | 2.94E-03 |
| 14 | GO:0009536: plastid | 3.28E-03 |
| 15 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.44E-03 |
| 16 | GO:0009524: phragmoplast | 3.76E-03 |
| 17 | GO:0009570: chloroplast stroma | 4.03E-03 |
| 18 | GO:0015629: actin cytoskeleton | 5.13E-03 |
| 19 | GO:0046658: anchored component of plasma membrane | 6.49E-03 |
| 20 | GO:0009504: cell plate | 7.04E-03 |
| 21 | GO:0005694: chromosome | 7.72E-03 |
| 22 | GO:0009535: chloroplast thylakoid membrane | 8.18E-03 |
| 23 | GO:0030529: intracellular ribonucleoprotein complex | 9.54E-03 |
| 24 | GO:0005622: intracellular | 9.61E-03 |
| 25 | GO:0009707: chloroplast outer membrane | 1.15E-02 |
| 26 | GO:0019005: SCF ubiquitin ligase complex | 1.15E-02 |
| 27 | GO:0005819: spindle | 1.45E-02 |
| 28 | GO:0031977: thylakoid lumen | 1.54E-02 |
| 29 | GO:0016607: nuclear speck | 2.31E-02 |
| 30 | GO:0005773: vacuole | 2.97E-02 |
| 31 | GO:0009543: chloroplast thylakoid lumen | 3.03E-02 |
| 32 | GO:0009705: plant-type vacuole membrane | 3.81E-02 |
| 33 | GO:0031225: anchored component of membrane | 3.86E-02 |