co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G52420

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010081: regulation of inflorescence meristem growth	0.00E+00
2	GO:0010422: regulation of brassinosteroid biosynthetic process	0.00E+00
3	GO:0033231: carbohydrate export	0.00E+00
4	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
5	GO:0080127: fruit septum development	0.00E+00
6	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
7	GO:0046620: regulation of organ growth	1.77E-05
8	GO:0000373: Group II intron splicing	3.45E-05
9	GO:0010582: floral meristem determinacy	9.25E-05
10	GO:0015904: tetracycline transport	4.15E-04
11	GO:0034757: negative regulation of iron ion transport	4.15E-04
12	GO:1902334: fructose export from vacuole to cytoplasm	4.15E-04
13	GO:0015755: fructose transport	4.15E-04
14	GO:0006285: base-excision repair, AP site formation	4.15E-04
15	GO:0010080: regulation of floral meristem growth	4.15E-04
16	GO:0043609: regulation of carbon utilization	4.15E-04
17	GO:0040008: regulation of growth	6.03E-04
18	GO:0009733: response to auxin	6.91E-04
19	GO:1900865: chloroplast RNA modification	8.44E-04
20	GO:1900871: chloroplast mRNA modification	8.99E-04
21	GO:0010271: regulation of chlorophyll catabolic process	8.99E-04
22	GO:0080009: mRNA methylation	8.99E-04
23	GO:0009786: regulation of asymmetric cell division	8.99E-04
24	GO:0031648: protein destabilization	8.99E-04
25	GO:0071398: cellular response to fatty acid	1.46E-03
26	GO:0045910: negative regulation of DNA recombination	1.46E-03
27	GO:0006000: fructose metabolic process	1.46E-03
28	GO:0006296: nucleotide-excision repair, DNA incision, 5'-to lesion	1.46E-03
29	GO:0010022: meristem determinacy	1.46E-03
30	GO:0080117: secondary growth	1.46E-03
31	GO:0010371: regulation of gibberellin biosynthetic process	2.11E-03
32	GO:0051513: regulation of monopolar cell growth	2.11E-03
33	GO:0051639: actin filament network formation	2.11E-03
34	GO:0034059: response to anoxia	2.11E-03
35	GO:1990019: protein storage vacuole organization	2.11E-03
36	GO:0009734: auxin-activated signaling pathway	2.14E-03
37	GO:0005992: trehalose biosynthetic process	2.29E-03
38	GO:0051017: actin filament bundle assembly	2.29E-03
39	GO:0006631: fatty acid metabolic process	2.69E-03
40	GO:0051764: actin crosslink formation	2.84E-03
41	GO:0009755: hormone-mediated signaling pathway	2.84E-03
42	GO:0009926: auxin polar transport	2.98E-03
43	GO:0009451: RNA modification	3.16E-03
44	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	3.32E-03
45	GO:0071215: cellular response to abscisic acid stimulus	3.32E-03
46	GO:0006284: base-excision repair	3.61E-03
47	GO:0016123: xanthophyll biosynthetic process	3.63E-03
48	GO:0010438: cellular response to sulfur starvation	3.63E-03
49	GO:0010158: abaxial cell fate specification	3.63E-03
50	GO:0045487: gibberellin catabolic process	3.63E-03
51	GO:0080110: sporopollenin biosynthetic process	3.63E-03
52	GO:0016131: brassinosteroid metabolic process	3.63E-03
53	GO:0070417: cellular response to cold	3.91E-03
54	GO:0010087: phloem or xylem histogenesis	4.23E-03
55	GO:0010358: leaf shaping	4.49E-03
56	GO:0016554: cytidine to uridine editing	4.49E-03
57	GO:1902456: regulation of stomatal opening	4.49E-03
58	GO:0048831: regulation of shoot system development	4.49E-03
59	GO:0010190: cytochrome b6f complex assembly	4.49E-03
60	GO:0003006: developmental process involved in reproduction	4.49E-03
61	GO:0009646: response to absence of light	4.90E-03
62	GO:0031930: mitochondria-nucleus signaling pathway	5.42E-03
63	GO:0048509: regulation of meristem development	5.42E-03
64	GO:0030488: tRNA methylation	5.42E-03
65	GO:0009826: unidimensional cell growth	5.61E-03
66	GO:0016132: brassinosteroid biosynthetic process	5.63E-03
67	GO:0032502: developmental process	6.02E-03
68	GO:0006955: immune response	6.41E-03
69	GO:0010050: vegetative phase change	6.41E-03
70	GO:0010098: suspensor development	6.41E-03
71	GO:0015693: magnesium ion transport	6.41E-03
72	GO:0009828: plant-type cell wall loosening	6.83E-03
73	GO:0009819: drought recovery	7.45E-03
74	GO:0070413: trehalose metabolism in response to stress	7.45E-03
75	GO:0010439: regulation of glucosinolate biosynthetic process	7.45E-03
76	GO:0009850: auxin metabolic process	7.45E-03
77	GO:0009690: cytokinin metabolic process	7.45E-03
78	GO:2000070: regulation of response to water deprivation	7.45E-03
79	GO:0006002: fructose 6-phosphate metabolic process	8.55E-03
80	GO:0010497: plasmodesmata-mediated intercellular transport	8.55E-03
81	GO:0009657: plastid organization	8.55E-03
82	GO:0032544: plastid translation	8.55E-03
83	GO:0009056: catabolic process	9.71E-03
84	GO:0006098: pentose-phosphate shunt	9.71E-03
85	GO:0048507: meristem development	9.71E-03
86	GO:0051865: protein autoubiquitination	9.71E-03
87	GO:0010018: far-red light signaling pathway	1.09E-02
88	GO:0045892: negative regulation of transcription, DNA-templated	1.11E-02
89	GO:0009416: response to light stimulus	1.12E-02
90	GO:0000160: phosphorelay signal transduction system	1.12E-02
91	GO:0009793: embryo development ending in seed dormancy	1.13E-02
92	GO:0009641: shade avoidance	1.22E-02
93	GO:0006298: mismatch repair	1.22E-02
94	GO:0016441: posttranscriptional gene silencing	1.22E-02
95	GO:0006949: syncytium formation	1.22E-02
96	GO:0006995: cellular response to nitrogen starvation	1.22E-02
97	GO:0009299: mRNA transcription	1.22E-02
98	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.22E-02
99	GO:0048829: root cap development	1.22E-02
100	GO:0009682: induced systemic resistance	1.35E-02
101	GO:0006415: translational termination	1.35E-02
102	GO:0009750: response to fructose	1.35E-02
103	GO:0009867: jasmonic acid mediated signaling pathway	1.36E-02
104	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.49E-02
105	GO:0009725: response to hormone	1.63E-02
106	GO:0006094: gluconeogenesis	1.63E-02
107	GO:0009767: photosynthetic electron transport chain	1.63E-02
108	GO:0010588: cotyledon vascular tissue pattern formation	1.63E-02
109	GO:0010102: lateral root morphogenesis	1.63E-02
110	GO:0048467: gynoecium development	1.77E-02
111	GO:0042546: cell wall biogenesis	1.83E-02
112	GO:0009636: response to toxic substance	1.97E-02
113	GO:0042753: positive regulation of circadian rhythm	2.08E-02
114	GO:0009664: plant-type cell wall organization	2.21E-02
115	GO:0009736: cytokinin-activated signaling pathway	2.37E-02
116	GO:0051260: protein homooligomerization	2.57E-02
117	GO:0010431: seed maturation	2.57E-02
118	GO:0016998: cell wall macromolecule catabolic process	2.57E-02
119	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.74E-02
120	GO:0048316: seed development	2.89E-02
121	GO:0009625: response to insect	2.91E-02
122	GO:0009693: ethylene biosynthetic process	2.91E-02
123	GO:0009686: gibberellin biosynthetic process	2.91E-02
124	GO:0010082: regulation of root meristem growth	2.91E-02
125	GO:0010584: pollen exine formation	3.09E-02
126	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.27E-02
127	GO:0010118: stomatal movement	3.46E-02
128	GO:0080022: primary root development	3.46E-02
129	GO:0010501: RNA secondary structure unwinding	3.46E-02
130	GO:0009742: brassinosteroid mediated signaling pathway	3.57E-02
131	GO:0009741: response to brassinosteroid	3.65E-02
132	GO:0010268: brassinosteroid homeostasis	3.65E-02
133	GO:0010305: leaf vascular tissue pattern formation	3.65E-02
134	GO:0010182: sugar mediated signaling pathway	3.65E-02
135	GO:0048544: recognition of pollen	3.85E-02
136	GO:0007018: microtubule-based movement	3.85E-02
137	GO:0045454: cell redox homeostasis	3.91E-02
138	GO:0071554: cell wall organization or biogenesis	4.24E-02
139	GO:0010583: response to cyclopentenone	4.44E-02
140	GO:0031047: gene silencing by RNA	4.44E-02
141	GO:0016032: viral process	4.44E-02
142	GO:0019761: glucosinolate biosynthetic process	4.44E-02
143	GO:0010090: trichome morphogenesis	4.65E-02
144	GO:0007275: multicellular organism development	4.74E-02
145	GO:0016125: sterol metabolic process	4.86E-02
146	GO:0009639: response to red or far red light	4.86E-02
147	GO:0006464: cellular protein modification process	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0015267: channel activity	0.00E+00
2	GO:0015284: fructose uniporter activity	0.00E+00
3	GO:0071633: dihydroceramidase activity	0.00E+00
4	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
5	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
6	GO:0010012: steroid 22-alpha hydroxylase activity	4.15E-04
7	GO:0050139: nicotinate-N-glucosyltransferase activity	4.15E-04
8	GO:0005227: calcium activated cation channel activity	4.15E-04
9	GO:0042834: peptidoglycan binding	4.15E-04
10	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	4.15E-04
11	GO:0000703: oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity	4.15E-04
12	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	4.15E-04
13	GO:0045543: gibberellin 2-beta-dioxygenase activity	8.99E-04
14	GO:0043425: bHLH transcription factor binding	8.99E-04
15	GO:0010296: prenylcysteine methylesterase activity	8.99E-04
16	GO:0008805: carbon-monoxide oxygenase activity	8.99E-04
17	GO:0008493: tetracycline transporter activity	8.99E-04
18	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	8.99E-04
19	GO:0050736: O-malonyltransferase activity	8.99E-04
20	GO:0009884: cytokinin receptor activity	8.99E-04
21	GO:0005353: fructose transmembrane transporter activity	8.99E-04
22	GO:0017118: lipoyltransferase activity	8.99E-04
23	GO:0004805: trehalose-phosphatase activity	9.82E-04
24	GO:0004519: endonuclease activity	1.28E-03
25	GO:0004148: dihydrolipoyl dehydrogenase activity	1.46E-03
26	GO:0003906: DNA-(apurinic or apyrimidinic site) lyase activity	1.46E-03
27	GO:0005034: osmosensor activity	1.46E-03
28	GO:0004300: enoyl-CoA hydratase activity	2.11E-03
29	GO:0001872: (1->3)-beta-D-glucan binding	2.11E-03
30	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	2.11E-03
31	GO:0016149: translation release factor activity, codon specific	2.11E-03
32	GO:0019104: DNA N-glycosylase activity	2.84E-03
33	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	2.84E-03
34	GO:0019199: transmembrane receptor protein kinase activity	2.84E-03
35	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.63E-03
36	GO:0008725: DNA-3-methyladenine glycosylase activity	3.63E-03
37	GO:0004523: RNA-DNA hybrid ribonuclease activity	3.63E-03
38	GO:2001070: starch binding	4.49E-03
39	GO:0030983: mismatched DNA binding	4.49E-03
40	GO:0004332: fructose-bisphosphate aldolase activity	4.49E-03
41	GO:0004709: MAP kinase kinase kinase activity	4.49E-03
42	GO:0003723: RNA binding	4.69E-03
43	GO:0050662: coenzyme binding	4.90E-03
44	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	5.42E-03
45	GO:0016832: aldehyde-lyase activity	5.42E-03
46	GO:0019900: kinase binding	5.42E-03
47	GO:0004518: nuclease activity	6.02E-03
48	GO:0051015: actin filament binding	6.42E-03
49	GO:0003724: RNA helicase activity	8.55E-03
50	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	9.71E-03
51	GO:0003747: translation release factor activity	9.71E-03
52	GO:0004871: signal transducer activity	1.16E-02
53	GO:0004673: protein histidine kinase activity	1.22E-02
54	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.24E-02
55	GO:0015095: magnesium ion transmembrane transporter activity	1.63E-02
56	GO:0031072: heat shock protein binding	1.63E-02
57	GO:0000155: phosphorelay sensor kinase activity	1.63E-02
58	GO:0043621: protein self-association	1.90E-02
59	GO:0008146: sulfotransferase activity	1.92E-02
60	GO:0051119: sugar transmembrane transporter activity	1.92E-02
61	GO:0003712: transcription cofactor activity	1.92E-02
62	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	2.08E-02
63	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	2.08E-02
64	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	2.08E-02
65	GO:0051536: iron-sulfur cluster binding	2.24E-02
66	GO:0031418: L-ascorbic acid binding	2.24E-02
67	GO:0043424: protein histidine kinase binding	2.40E-02
68	GO:0003690: double-stranded DNA binding	2.45E-02
69	GO:0003777: microtubule motor activity	2.62E-02
70	GO:0003756: protein disulfide isomerase activity	3.09E-02
71	GO:0016874: ligase activity	3.17E-02
72	GO:0015035: protein disulfide oxidoreductase activity	3.47E-02
73	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	3.65E-02
74	GO:0016762: xyloglucan:xyloglucosyl transferase activity	4.24E-02
75	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.32E-02
76	GO:0000156: phosphorelay response regulator activity	4.65E-02
77	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.78E-02
78	GO:0003684: damaged DNA binding	4.86E-02
79	GO:0016791: phosphatase activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0030139: endocytic vesicle	1.46E-03
2	GO:0032585: multivesicular body membrane	2.11E-03
3	GO:0032432: actin filament bundle	2.11E-03
4	GO:0009654: photosystem II oxygen evolving complex	2.53E-03
5	GO:0009544: chloroplast ATP synthase complex	2.84E-03
6	GO:0015629: actin cytoskeleton	3.32E-03
7	GO:0019898: extrinsic component of membrane	5.26E-03
8	GO:0009986: cell surface	6.41E-03
9	GO:0010494: cytoplasmic stress granule	9.71E-03
10	GO:0042644: chloroplast nucleoid	9.71E-03
11	GO:0005884: actin filament	1.35E-02
12	GO:0009508: plastid chromosome	1.63E-02
13	GO:0043231: intracellular membrane-bounded organelle	1.72E-02
14	GO:0030095: chloroplast photosystem II	1.77E-02
15	GO:0005856: cytoskeleton	1.97E-02
16	GO:0042651: thylakoid membrane	2.40E-02
17	GO:0009507: chloroplast	2.82E-02
18	GO:0005874: microtubule	3.00E-02
19	GO:0005871: kinesin complex	3.28E-02
20	GO:0009504: cell plate	4.04E-02