co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G52010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA	0.00E+00
2	GO:0045176: apical protein localization	0.00E+00
3	GO:0043972: histone H3-K23 acetylation	0.00E+00
4	GO:0046486: glycerolipid metabolic process	0.00E+00
5	GO:0006437: tyrosyl-tRNA aminoacylation	0.00E+00
6	GO:0044154: histone H3-K14 acetylation	0.00E+00
7	GO:0009451: RNA modification	1.19E-07
8	GO:0009793: embryo development ending in seed dormancy	7.05E-05
9	GO:0019478: D-amino acid catabolic process	2.70E-04
10	GO:0034757: negative regulation of iron ion transport	2.70E-04
11	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	2.70E-04
12	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	2.70E-04
13	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	2.70E-04
14	GO:0043971: histone H3-K18 acetylation	2.70E-04
15	GO:0006650: glycerophospholipid metabolic process	5.94E-04
16	GO:0010271: regulation of chlorophyll catabolic process	5.94E-04
17	GO:0009220: pyrimidine ribonucleotide biosynthetic process	5.94E-04
18	GO:0043039: tRNA aminoacylation	5.94E-04
19	GO:0000160: phosphorelay signal transduction system	7.68E-04
20	GO:0010540: basipetal auxin transport	8.95E-04
21	GO:0006013: mannose metabolic process	9.62E-04
22	GO:0080117: secondary growth	9.62E-04
23	GO:0042780: tRNA 3'-end processing	9.62E-04
24	GO:0045493: xylan catabolic process	9.62E-04
25	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	9.62E-04
26	GO:0046168: glycerol-3-phosphate catabolic process	9.62E-04
27	GO:0080188: RNA-directed DNA methylation	9.99E-04
28	GO:0006863: purine nucleobase transport	1.11E-03
29	GO:0009800: cinnamic acid biosynthetic process	1.38E-03
30	GO:0010306: rhamnogalacturonan II biosynthetic process	1.38E-03
31	GO:2000904: regulation of starch metabolic process	1.38E-03
32	GO:0045017: glycerolipid biosynthetic process	1.38E-03
33	GO:0009102: biotin biosynthetic process	1.38E-03
34	GO:0044211: CTP salvage	1.38E-03
35	GO:0006072: glycerol-3-phosphate metabolic process	1.38E-03
36	GO:0044206: UMP salvage	1.84E-03
37	GO:0015846: polyamine transport	1.84E-03
38	GO:0044205: 'de novo' UMP biosynthetic process	1.84E-03
39	GO:0009956: radial pattern formation	1.84E-03
40	GO:0009736: cytokinin-activated signaling pathway	1.94E-03
41	GO:0009658: chloroplast organization	2.24E-03
42	GO:0016558: protein import into peroxisome matrix	2.35E-03
43	GO:0010158: abaxial cell fate specification	2.35E-03
44	GO:0048868: pollen tube development	2.42E-03
45	GO:0008654: phospholipid biosynthetic process	2.79E-03
46	GO:0006206: pyrimidine nucleobase metabolic process	2.90E-03
47	GO:0006655: phosphatidylglycerol biosynthetic process	2.90E-03
48	GO:0048831: regulation of shoot system development	2.90E-03
49	GO:0048827: phyllome development	2.90E-03
50	GO:0006559: L-phenylalanine catabolic process	2.90E-03
51	GO:0002229: defense response to oomycetes	2.98E-03
52	GO:0048509: regulation of meristem development	3.49E-03
53	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.49E-03
54	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	4.12E-03
55	GO:0006401: RNA catabolic process	4.12E-03
56	GO:0009610: response to symbiotic fungus	4.12E-03
57	GO:0010050: vegetative phase change	4.12E-03
58	GO:0006353: DNA-templated transcription, termination	4.77E-03
59	GO:0009850: auxin metabolic process	4.77E-03
60	GO:0009657: plastid organization	5.47E-03
61	GO:0019430: removal of superoxide radicals	5.47E-03
62	GO:0032544: plastid translation	5.47E-03
63	GO:0044030: regulation of DNA methylation	5.47E-03
64	GO:0046916: cellular transition metal ion homeostasis	6.20E-03
65	GO:0000373: Group II intron splicing	6.20E-03
66	GO:0008202: steroid metabolic process	6.96E-03
67	GO:0010192: mucilage biosynthetic process	7.75E-03
68	GO:0006415: translational termination	8.58E-03
69	GO:0009089: lysine biosynthetic process via diaminopimelate	8.58E-03
70	GO:0016485: protein processing	8.58E-03
71	GO:0045037: protein import into chloroplast stroma	9.44E-03
72	GO:0010582: floral meristem determinacy	9.44E-03
73	GO:0016024: CDP-diacylglycerol biosynthetic process	9.44E-03
74	GO:0010229: inflorescence development	1.03E-02
75	GO:0009933: meristem structural organization	1.12E-02
76	GO:0010020: chloroplast fission	1.12E-02
77	GO:0009825: multidimensional cell growth	1.22E-02
78	GO:0006364: rRNA processing	1.24E-02
79	GO:0009833: plant-type primary cell wall biogenesis	1.32E-02
80	GO:0009416: response to light stimulus	1.34E-02
81	GO:0080167: response to karrikin	1.40E-02
82	GO:0009116: nucleoside metabolic process	1.42E-02
83	GO:0006418: tRNA aminoacylation for protein translation	1.52E-02
84	GO:0006306: DNA methylation	1.62E-02
85	GO:0016226: iron-sulfur cluster assembly	1.73E-02
86	GO:0009686: gibberellin biosynthetic process	1.84E-02
87	GO:0010082: regulation of root meristem growth	1.84E-02
88	GO:0071215: cellular response to abscisic acid stimulus	1.84E-02
89	GO:0070417: cellular response to cold	2.07E-02
90	GO:0010087: phloem or xylem histogenesis	2.19E-02
91	GO:0010305: leaf vascular tissue pattern formation	2.31E-02
92	GO:0009058: biosynthetic process	2.34E-02
93	GO:0048825: cotyledon development	2.55E-02
94	GO:0006635: fatty acid beta-oxidation	2.68E-02
95	GO:0080156: mitochondrial mRNA modification	2.68E-02
96	GO:0006633: fatty acid biosynthetic process	2.79E-02
97	GO:0010583: response to cyclopentenone	2.81E-02
98	GO:0031047: gene silencing by RNA	2.81E-02
99	GO:1901657: glycosyl compound metabolic process	2.94E-02
100	GO:0009639: response to red or far red light	3.07E-02
101	GO:0009911: positive regulation of flower development	3.48E-02
102	GO:0010029: regulation of seed germination	3.63E-02
103	GO:0009627: systemic acquired resistance	3.77E-02
104	GO:0010411: xyloglucan metabolic process	3.91E-02
105	GO:0030244: cellulose biosynthetic process	4.21E-02
106	GO:0009832: plant-type cell wall biogenesis	4.36E-02

Rank	GO Term	Adjusted P value
1	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
2	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
3	GO:0004588: orotate phosphoribosyltransferase activity	0.00E+00
4	GO:0004590: orotidine-5'-phosphate decarboxylase activity	0.00E+00
5	GO:0019808: polyamine binding	0.00E+00
6	GO:0008710: 8-amino-7-oxononanoate synthase activity	0.00E+00
7	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
8	GO:0004056: argininosuccinate lyase activity	0.00E+00
9	GO:0008859: exoribonuclease II activity	0.00E+00
10	GO:0004519: endonuclease activity	6.25E-05
11	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	2.70E-04
12	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	2.70E-04
13	GO:0008836: diaminopimelate decarboxylase activity	2.70E-04
14	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	2.70E-04
15	GO:0004831: tyrosine-tRNA ligase activity	2.70E-04
16	GO:0009884: cytokinin receptor activity	5.94E-04
17	GO:0004047: aminomethyltransferase activity	5.94E-04
18	GO:0008805: carbon-monoxide oxygenase activity	5.94E-04
19	GO:0005034: osmosensor activity	9.62E-04
20	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	9.62E-04
21	GO:0016707: gibberellin 3-beta-dioxygenase activity	9.62E-04
22	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	9.62E-04
23	GO:0045548: phenylalanine ammonia-lyase activity	9.62E-04
24	GO:0042781: 3'-tRNA processing endoribonuclease activity	9.62E-04
25	GO:0004857: enzyme inhibitor activity	1.23E-03
26	GO:0005345: purine nucleobase transmembrane transporter activity	1.35E-03
27	GO:0003723: RNA binding	1.37E-03
28	GO:0004540: ribonuclease activity	1.48E-03
29	GO:0009044: xylan 1,4-beta-xylosidase activity	1.84E-03
30	GO:0046556: alpha-L-arabinofuranosidase activity	1.84E-03
31	GO:0004845: uracil phosphoribosyltransferase activity	1.84E-03
32	GO:0010385: double-stranded methylated DNA binding	1.84E-03
33	GO:0004784: superoxide dismutase activity	2.90E-03
34	GO:0004605: phosphatidate cytidylyltransferase activity	2.90E-03
35	GO:0000156: phosphorelay response regulator activity	3.39E-03
36	GO:0004849: uridine kinase activity	3.49E-03
37	GO:0019900: kinase binding	3.49E-03
38	GO:0004559: alpha-mannosidase activity	3.49E-03
39	GO:0019899: enzyme binding	4.12E-03
40	GO:0046914: transition metal ion binding	5.47E-03
41	GO:0008142: oxysterol binding	5.47E-03
42	GO:0003747: translation release factor activity	6.20E-03
43	GO:0004673: protein histidine kinase activity	7.75E-03
44	GO:0015020: glucuronosyltransferase activity	7.75E-03
45	GO:0008327: methyl-CpG binding	8.58E-03
46	GO:0005525: GTP binding	8.64E-03
47	GO:0043621: protein self-association	9.94E-03
48	GO:0000155: phosphorelay sensor kinase activity	1.03E-02
49	GO:0009982: pseudouridine synthase activity	1.03E-02
50	GO:0000175: 3'-5'-exoribonuclease activity	1.03E-02
51	GO:0004535: poly(A)-specific ribonuclease activity	1.12E-02
52	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.12E-02
53	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.32E-02
54	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.32E-02
55	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.32E-02
56	GO:0008134: transcription factor binding	1.42E-02
57	GO:0043424: protein histidine kinase binding	1.52E-02
58	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.62E-02
59	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.62E-02
60	GO:0030570: pectate lyase activity	1.84E-02
61	GO:0016760: cellulose synthase (UDP-forming) activity	1.84E-02
62	GO:0004871: signal transducer activity	1.86E-02
63	GO:0004386: helicase activity	1.93E-02
64	GO:0004812: aminoacyl-tRNA ligase activity	2.07E-02
65	GO:0004402: histone acetyltransferase activity	2.19E-02
66	GO:0019843: rRNA binding	2.22E-02
67	GO:0003924: GTPase activity	2.28E-02
68	GO:0019901: protein kinase binding	2.55E-02
69	GO:0046910: pectinesterase inhibitor activity	2.85E-02
70	GO:0016759: cellulose synthase activity	3.07E-02
71	GO:0008237: metallopeptidase activity	3.21E-02
72	GO:0008483: transaminase activity	3.21E-02
73	GO:0008194: UDP-glycosyltransferase activity	3.42E-02
74	GO:0042802: identical protein binding	3.88E-02
75	GO:0102483: scopolin beta-glucosidase activity	3.91E-02
76	GO:0004806: triglyceride lipase activity	3.91E-02
77	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.51E-02
78	GO:0004222: metalloendopeptidase activity	4.51E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0035452: extrinsic component of plastid membrane	0.00E+00
3	GO:0009507: chloroplast	7.49E-05
4	GO:0010370: perinucleolar chromocenter	2.70E-04
5	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.38E-03
6	GO:0042646: plastid nucleoid	1.38E-03
7	GO:0000178: exosome (RNase complex)	2.35E-03
8	GO:0009707: chloroplast outer membrane	5.61E-03
9	GO:0009505: plant-type cell wall	5.94E-03
10	GO:0042644: chloroplast nucleoid	6.20E-03
11	GO:0005720: nuclear heterochromatin	6.20E-03
12	GO:0016602: CCAAT-binding factor complex	1.03E-02
13	GO:0009570: chloroplast stroma	1.19E-02
14	GO:0000419: DNA-directed RNA polymerase V complex	1.32E-02
15	GO:0005770: late endosome	2.31E-02
16	GO:0043231: intracellular membrane-bounded organelle	2.58E-02
17	GO:0009295: nucleoid	3.21E-02
18	GO:0000932: P-body	3.48E-02