co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G51740

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
2	GO:0005993: trehalose catabolic process	0.00E+00
3	GO:0006983: ER overload response	0.00E+00
4	GO:0000077: DNA damage checkpoint	1.35E-04
5	GO:0042350: GDP-L-fucose biosynthetic process	1.35E-04
6	GO:1990641: response to iron ion starvation	1.35E-04
7	GO:0000303: response to superoxide	1.35E-04
8	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.35E-04
9	GO:1990022: RNA polymerase III complex localization to nucleus	1.35E-04
10	GO:0043182: vacuolar sequestering of sodium ion	1.35E-04
11	GO:0044376: RNA polymerase II complex import to nucleus	1.35E-04
12	GO:1902065: response to L-glutamate	1.35E-04
13	GO:1903648: positive regulation of chlorophyll catabolic process	1.35E-04
14	GO:0034975: protein folding in endoplasmic reticulum	1.35E-04
15	GO:0006457: protein folding	2.11E-04
16	GO:0042853: L-alanine catabolic process	3.11E-04
17	GO:0040020: regulation of meiotic nuclear division	3.11E-04
18	GO:0009812: flavonoid metabolic process	3.11E-04
19	GO:0006101: citrate metabolic process	3.11E-04
20	GO:0043066: negative regulation of apoptotic process	3.11E-04
21	GO:0080183: response to photooxidative stress	3.11E-04
22	GO:0034605: cellular response to heat	3.49E-04
23	GO:0009410: response to xenobiotic stimulus	5.13E-04
24	GO:1901562: response to paraquat	5.13E-04
25	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	5.13E-04
26	GO:0006517: protein deglycosylation	5.13E-04
27	GO:0051639: actin filament network formation	7.34E-04
28	GO:0072334: UDP-galactose transmembrane transport	7.34E-04
29	GO:0006809: nitric oxide biosynthetic process	7.34E-04
30	GO:0009226: nucleotide-sugar biosynthetic process	7.34E-04
31	GO:0071323: cellular response to chitin	7.34E-04
32	GO:0050482: arachidonic acid secretion	7.34E-04
33	GO:0055070: copper ion homeostasis	7.34E-04
34	GO:0055089: fatty acid homeostasis	7.34E-04
35	GO:0051764: actin crosslink formation	9.73E-04
36	GO:0022622: root system development	9.73E-04
37	GO:1901002: positive regulation of response to salt stress	9.73E-04
38	GO:0006097: glyoxylate cycle	1.23E-03
39	GO:0043248: proteasome assembly	1.51E-03
40	GO:0047484: regulation of response to osmotic stress	1.51E-03
41	GO:0009816: defense response to bacterium, incompatible interaction	1.74E-03
42	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.81E-03
43	GO:2000014: regulation of endosperm development	2.12E-03
44	GO:1900057: positive regulation of leaf senescence	2.12E-03
45	GO:0030307: positive regulation of cell growth	2.12E-03
46	GO:0010044: response to aluminum ion	2.12E-03
47	GO:0006644: phospholipid metabolic process	2.46E-03
48	GO:0006491: N-glycan processing	2.46E-03
49	GO:1900150: regulation of defense response to fungus	2.46E-03
50	GO:0006102: isocitrate metabolic process	2.46E-03
51	GO:0045087: innate immune response	2.70E-03
52	GO:0030968: endoplasmic reticulum unfolded protein response	2.81E-03
53	GO:0009738: abscisic acid-activated signaling pathway	2.87E-03
54	GO:0010332: response to gamma radiation	3.17E-03
55	GO:0009860: pollen tube growth	3.36E-03
56	GO:0009086: methionine biosynthetic process	3.55E-03
57	GO:0000209: protein polyubiquitination	3.60E-03
58	GO:0043069: negative regulation of programmed cell death	3.95E-03
59	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.19E-03
60	GO:0009846: pollen germination	4.34E-03
61	GO:0000038: very long-chain fatty acid metabolic process	4.36E-03
62	GO:0006913: nucleocytoplasmic transport	4.36E-03
63	GO:0012501: programmed cell death	4.79E-03
64	GO:0045037: protein import into chloroplast stroma	4.79E-03
65	GO:0010102: lateral root morphogenesis	5.22E-03
66	GO:0030036: actin cytoskeleton organization	5.22E-03
67	GO:0007034: vacuolar transport	5.68E-03
68	GO:0007030: Golgi organization	6.14E-03
69	GO:0009901: anther dehiscence	6.14E-03
70	GO:0070588: calcium ion transmembrane transport	6.14E-03
71	GO:0009408: response to heat	6.58E-03
72	GO:0000162: tryptophan biosynthetic process	6.62E-03
73	GO:0034976: response to endoplasmic reticulum stress	6.62E-03
74	GO:0006636: unsaturated fatty acid biosynthetic process	6.62E-03
75	GO:0009863: salicylic acid mediated signaling pathway	7.11E-03
76	GO:0030150: protein import into mitochondrial matrix	7.11E-03
77	GO:0051017: actin filament bundle assembly	7.11E-03
78	GO:0006289: nucleotide-excision repair	7.11E-03
79	GO:2000377: regulation of reactive oxygen species metabolic process	7.11E-03
80	GO:0007275: multicellular organism development	7.24E-03
81	GO:0006334: nucleosome assembly	8.14E-03
82	GO:0048278: vesicle docking	8.14E-03
83	GO:0009814: defense response, incompatible interaction	8.67E-03
84	GO:0009058: biosynthetic process	8.74E-03
85	GO:0009873: ethylene-activated signaling pathway	9.10E-03
86	GO:0009411: response to UV	9.21E-03
87	GO:0009790: embryo development	9.68E-03
88	GO:0009306: protein secretion	9.77E-03
89	GO:0009960: endosperm development	1.15E-02
90	GO:0010197: polar nucleus fusion	1.15E-02
91	GO:0061025: membrane fusion	1.21E-02
92	GO:0006623: protein targeting to vacuole	1.27E-02
93	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.28E-02
94	GO:0010193: response to ozone	1.34E-02
95	GO:0006891: intra-Golgi vesicle-mediated transport	1.34E-02
96	GO:0009555: pollen development	1.36E-02
97	GO:0016032: viral process	1.40E-02
98	GO:0009630: gravitropism	1.40E-02
99	GO:0030163: protein catabolic process	1.46E-02
100	GO:0006464: cellular protein modification process	1.53E-02
101	GO:0046686: response to cadmium ion	1.72E-02
102	GO:0001666: response to hypoxia	1.73E-02
103	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.80E-02
104	GO:0006906: vesicle fusion	1.88E-02
105	GO:0048573: photoperiodism, flowering	1.95E-02
106	GO:0048767: root hair elongation	2.17E-02
107	GO:0010119: regulation of stomatal movement	2.32E-02
108	GO:0000724: double-strand break repair via homologous recombination	2.40E-02
109	GO:0006351: transcription, DNA-templated	2.43E-02
110	GO:0009867: jasmonic acid mediated signaling pathway	2.48E-02
111	GO:0006099: tricarboxylic acid cycle	2.56E-02
112	GO:0006839: mitochondrial transport	2.72E-02
113	GO:0006886: intracellular protein transport	2.73E-02
114	GO:0006631: fatty acid metabolic process	2.80E-02
115	GO:0010114: response to red light	2.97E-02
116	GO:0016042: lipid catabolic process	3.16E-02
117	GO:0009414: response to water deprivation	3.21E-02
118	GO:0006979: response to oxidative stress	3.34E-02
119	GO:0031347: regulation of defense response	3.40E-02
120	GO:0042538: hyperosmotic salinity response	3.49E-02
121	GO:0006486: protein glycosylation	3.67E-02
122	GO:0010224: response to UV-B	3.76E-02
123	GO:0006857: oligopeptide transport	3.85E-02
124	GO:0006096: glycolytic process	4.13E-02
125	GO:0009553: embryo sac development	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
2	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
3	GO:0016530: metallochaperone activity	0.00E+00
4	GO:0034338: short-chain carboxylesterase activity	0.00E+00
5	GO:0004623: phospholipase A2 activity	2.48E-05
6	GO:0015927: trehalase activity	1.35E-04
7	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	1.35E-04
8	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	1.35E-04
9	GO:0047150: betaine-homocysteine S-methyltransferase activity	1.35E-04
10	GO:0050577: GDP-L-fucose synthase activity	1.35E-04
11	GO:0003994: aconitate hydratase activity	3.11E-04
12	GO:0000774: adenyl-nucleotide exchange factor activity	3.11E-04
13	GO:0000975: regulatory region DNA binding	5.13E-04
14	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	7.34E-04
15	GO:0005460: UDP-glucose transmembrane transporter activity	7.34E-04
16	GO:0004834: tryptophan synthase activity	9.73E-04
17	GO:0005459: UDP-galactose transmembrane transporter activity	1.23E-03
18	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.23E-03
19	GO:0047714: galactolipase activity	1.51E-03
20	GO:0035252: UDP-xylosyltransferase activity	1.51E-03
21	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.81E-03
22	GO:0004869: cysteine-type endopeptidase inhibitor activity	2.46E-03
23	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	2.81E-03
24	GO:0008417: fucosyltransferase activity	3.17E-03
25	GO:0004743: pyruvate kinase activity	3.55E-03
26	GO:0030955: potassium ion binding	3.55E-03
27	GO:0030234: enzyme regulator activity	3.95E-03
28	GO:0043565: sequence-specific DNA binding	4.58E-03
29	GO:0015198: oligopeptide transporter activity	4.79E-03
30	GO:0005388: calcium-transporting ATPase activity	5.22E-03
31	GO:0042803: protein homodimerization activity	5.35E-03
32	GO:0008061: chitin binding	6.14E-03
33	GO:0022857: transmembrane transporter activity	6.23E-03
34	GO:0051082: unfolded protein binding	6.62E-03
35	GO:0015035: protein disulfide oxidoreductase activity	6.82E-03
36	GO:0051087: chaperone binding	7.62E-03
37	GO:0004707: MAP kinase activity	8.14E-03
38	GO:0030170: pyridoxal phosphate binding	9.20E-03
39	GO:0003756: protein disulfide isomerase activity	9.77E-03
40	GO:0004499: N,N-dimethylaniline monooxygenase activity	9.77E-03
41	GO:0005102: receptor binding	1.03E-02
42	GO:0016853: isomerase activity	1.21E-02
43	GO:0050662: coenzyme binding	1.21E-02
44	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.46E-02
45	GO:0051015: actin filament binding	1.46E-02
46	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.60E-02
47	GO:0004806: triglyceride lipase activity	1.95E-02
48	GO:0030247: polysaccharide binding	1.95E-02
49	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.95E-02
50	GO:0005507: copper ion binding	2.13E-02
51	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.26E-02
52	GO:0061630: ubiquitin protein ligase activity	2.32E-02
53	GO:0000149: SNARE binding	2.64E-02
54	GO:0050661: NADP binding	2.72E-02
55	GO:0051539: 4 iron, 4 sulfur cluster binding	2.72E-02
56	GO:0005484: SNAP receptor activity	2.97E-02
57	GO:0005509: calcium ion binding	2.99E-02
58	GO:0051537: 2 iron, 2 sulfur cluster binding	3.14E-02
59	GO:0005198: structural molecule activity	3.23E-02
60	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.42E-02
61	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0001405: presequence translocase-associated import motor	1.35E-04
2	GO:0005788: endoplasmic reticulum lumen	1.51E-04
3	GO:0032432: actin filament bundle	7.34E-04
4	GO:0030173: integral component of Golgi membrane	1.81E-03
5	GO:0016363: nuclear matrix	1.81E-03
6	GO:0016272: prefoldin complex	1.81E-03
7	GO:0005783: endoplasmic reticulum	3.19E-03
8	GO:0031902: late endosome membrane	3.20E-03
9	GO:0030665: clathrin-coated vesicle membrane	3.55E-03
10	GO:0000139: Golgi membrane	3.77E-03
11	GO:0017119: Golgi transport complex	3.95E-03
12	GO:0008541: proteasome regulatory particle, lid subcomplex	4.36E-03
13	GO:0005884: actin filament	4.36E-03
14	GO:0005789: endoplasmic reticulum membrane	4.66E-03
15	GO:0030176: integral component of endoplasmic reticulum membrane	6.14E-03
16	GO:0005795: Golgi stack	6.14E-03
17	GO:0009543: chloroplast thylakoid lumen	8.29E-03
18	GO:0016592: mediator complex	1.40E-02
19	GO:0032580: Golgi cisterna membrane	1.53E-02
20	GO:0005774: vacuolar membrane	1.92E-02
21	GO:0000325: plant-type vacuole	2.32E-02
22	GO:0015934: large ribosomal subunit	2.32E-02
23	GO:0031201: SNARE complex	2.80E-02
24	GO:0005743: mitochondrial inner membrane	3.03E-02
25	GO:0043231: intracellular membrane-bounded organelle	3.59E-02
26	GO:0000502: proteasome complex	3.67E-02
27	GO:0005635: nuclear envelope	3.85E-02
28	GO:0005834: heterotrimeric G-protein complex	4.32E-02
29	GO:0005887: integral component of plasma membrane	4.41E-02
30	GO:0009706: chloroplast inner membrane	4.71E-02