co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G51460

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010081: regulation of inflorescence meristem growth	0.00E+00
2	GO:0009583: detection of light stimulus	0.00E+00
3	GO:0045176: apical protein localization	0.00E+00
4	GO:0071000: response to magnetism	0.00E+00
5	GO:0000372: Group I intron splicing	0.00E+00
6	GO:0080127: fruit septum development	0.00E+00
7	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
8	GO:1905177: tracheary element differentiation	0.00E+00
9	GO:0000373: Group II intron splicing	3.34E-06
10	GO:0000105: histidine biosynthetic process	1.15E-04
11	GO:1902025: nitrate import	1.58E-04
12	GO:0043266: regulation of potassium ion transport	1.58E-04
13	GO:0010080: regulation of floral meristem growth	1.58E-04
14	GO:0072387: flavin adenine dinucleotide metabolic process	1.58E-04
15	GO:0043087: regulation of GTPase activity	1.58E-04
16	GO:2000021: regulation of ion homeostasis	1.58E-04
17	GO:0043609: regulation of carbon utilization	1.58E-04
18	GO:0090548: response to nitrate starvation	1.58E-04
19	GO:0000066: mitochondrial ornithine transport	1.58E-04
20	GO:0034757: negative regulation of iron ion transport	1.58E-04
21	GO:0006419: alanyl-tRNA aminoacylation	1.58E-04
22	GO:0010582: floral meristem determinacy	3.35E-04
23	GO:1901529: positive regulation of anion channel activity	3.60E-04
24	GO:1900871: chloroplast mRNA modification	3.60E-04
25	GO:0010617: circadian regulation of calcium ion oscillation	3.60E-04
26	GO:0010271: regulation of chlorophyll catabolic process	3.60E-04
27	GO:0099402: plant organ development	3.60E-04
28	GO:0010343: singlet oxygen-mediated programmed cell death	3.60E-04
29	GO:0031022: nuclear migration along microfilament	5.89E-04
30	GO:1902448: positive regulation of shade avoidance	5.89E-04
31	GO:0006000: fructose metabolic process	5.89E-04
32	GO:0010022: meristem determinacy	5.89E-04
33	GO:1901672: positive regulation of systemic acquired resistance	5.89E-04
34	GO:0080117: secondary growth	5.89E-04
35	GO:0010623: programmed cell death involved in cell development	5.89E-04
36	GO:0030029: actin filament-based process	5.89E-04
37	GO:0034059: response to anoxia	8.43E-04
38	GO:0009800: cinnamic acid biosynthetic process	8.43E-04
39	GO:1901332: negative regulation of lateral root development	8.43E-04
40	GO:0010371: regulation of gibberellin biosynthetic process	8.43E-04
41	GO:0051513: regulation of monopolar cell growth	8.43E-04
42	GO:0051639: actin filament network formation	8.43E-04
43	GO:0010508: positive regulation of autophagy	1.12E-03
44	GO:0008295: spermidine biosynthetic process	1.12E-03
45	GO:0006021: inositol biosynthetic process	1.12E-03
46	GO:1902347: response to strigolactone	1.12E-03
47	GO:0051764: actin crosslink formation	1.12E-03
48	GO:0080110: sporopollenin biosynthetic process	1.41E-03
49	GO:0010117: photoprotection	1.41E-03
50	GO:0046283: anthocyanin-containing compound metabolic process	1.41E-03
51	GO:0009904: chloroplast accumulation movement	1.41E-03
52	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.74E-03
53	GO:1901371: regulation of leaf morphogenesis	1.74E-03
54	GO:0006559: L-phenylalanine catabolic process	1.74E-03
55	GO:0060918: auxin transport	1.74E-03
56	GO:0048831: regulation of shoot system development	1.74E-03
57	GO:0003006: developmental process involved in reproduction	1.74E-03
58	GO:0048827: phyllome development	1.74E-03
59	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.09E-03
60	GO:0048509: regulation of meristem development	2.09E-03
61	GO:0009903: chloroplast avoidance movement	2.09E-03
62	GO:0010310: regulation of hydrogen peroxide metabolic process	2.09E-03
63	GO:0006400: tRNA modification	2.45E-03
64	GO:0051510: regulation of unidimensional cell growth	2.45E-03
65	GO:0006955: immune response	2.45E-03
66	GO:0000160: phosphorelay signal transduction system	2.77E-03
67	GO:0006499: N-terminal protein myristoylation	2.90E-03
68	GO:0006002: fructose 6-phosphate metabolic process	3.25E-03
69	GO:0009657: plastid organization	3.25E-03
70	GO:0032544: plastid translation	3.25E-03
71	GO:0048507: meristem development	3.67E-03
72	GO:0009638: phototropism	4.12E-03
73	GO:0010018: far-red light signaling pathway	4.12E-03
74	GO:0016571: histone methylation	4.12E-03
75	GO:0016573: histone acetylation	4.12E-03
76	GO:1900426: positive regulation of defense response to bacterium	4.12E-03
77	GO:0009416: response to light stimulus	4.20E-03
78	GO:0009299: mRNA transcription	4.58E-03
79	GO:0006535: cysteine biosynthetic process from serine	4.58E-03
80	GO:0031627: telomeric loop formation	4.58E-03
81	GO:0009636: response to toxic substance	4.82E-03
82	GO:0006415: translational termination	5.05E-03
83	GO:0006790: sulfur compound metabolic process	5.55E-03
84	GO:0009736: cytokinin-activated signaling pathway	5.77E-03
85	GO:0009785: blue light signaling pathway	6.06E-03
86	GO:0010229: inflorescence development	6.06E-03
87	GO:0010075: regulation of meristem growth	6.06E-03
88	GO:0009725: response to hormone	6.06E-03
89	GO:0006094: gluconeogenesis	6.06E-03
90	GO:0048467: gynoecium development	6.59E-03
91	GO:0010540: basipetal auxin transport	6.59E-03
92	GO:0009266: response to temperature stimulus	6.59E-03
93	GO:0048316: seed development	7.04E-03
94	GO:0046854: phosphatidylinositol phosphorylation	7.13E-03
95	GO:0042753: positive regulation of circadian rhythm	7.69E-03
96	GO:0006338: chromatin remodeling	8.27E-03
97	GO:0051017: actin filament bundle assembly	8.27E-03
98	GO:0006289: nucleotide-excision repair	8.27E-03
99	GO:2000377: regulation of reactive oxygen species metabolic process	8.27E-03
100	GO:0019344: cysteine biosynthetic process	8.27E-03
101	GO:0016998: cell wall macromolecule catabolic process	9.46E-03
102	GO:0010431: seed maturation	9.46E-03
103	GO:0016226: iron-sulfur cluster assembly	1.01E-02
104	GO:0071215: cellular response to abscisic acid stimulus	1.07E-02
105	GO:0010584: pollen exine formation	1.14E-02
106	GO:0010089: xylem development	1.14E-02
107	GO:0070417: cellular response to cold	1.20E-02
108	GO:0010087: phloem or xylem histogenesis	1.27E-02
109	GO:0010118: stomatal movement	1.27E-02
110	GO:0010182: sugar mediated signaling pathway	1.34E-02
111	GO:0046323: glucose import	1.34E-02
112	GO:0040008: regulation of growth	1.36E-02
113	GO:0048544: recognition of pollen	1.41E-02
114	GO:0007018: microtubule-based movement	1.41E-02
115	GO:0042752: regulation of circadian rhythm	1.41E-02
116	GO:0009646: response to absence of light	1.41E-02
117	GO:0009451: RNA modification	1.46E-02
118	GO:0048825: cotyledon development	1.48E-02
119	GO:0007264: small GTPase mediated signal transduction	1.63E-02
120	GO:0010583: response to cyclopentenone	1.63E-02
121	GO:0019761: glucosinolate biosynthetic process	1.63E-02
122	GO:0007166: cell surface receptor signaling pathway	1.63E-02
123	GO:0009639: response to red or far red light	1.78E-02
124	GO:0051607: defense response to virus	1.94E-02
125	GO:0009911: positive regulation of flower development	2.02E-02
126	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.10E-02
127	GO:0010029: regulation of seed germination	2.10E-02
128	GO:0010411: xyloglucan metabolic process	2.27E-02
129	GO:0005975: carbohydrate metabolic process	2.28E-02
130	GO:0006952: defense response	2.36E-02
131	GO:0006970: response to osmotic stress	2.38E-02
132	GO:0009817: defense response to fungus, incompatible interaction	2.44E-02
133	GO:0018298: protein-chromophore linkage	2.44E-02
134	GO:0010218: response to far red light	2.62E-02
135	GO:0007568: aging	2.71E-02
136	GO:0009910: negative regulation of flower development	2.71E-02
137	GO:0009637: response to blue light	2.89E-02
138	GO:0046777: protein autophosphorylation	2.93E-02
139	GO:0006839: mitochondrial transport	3.17E-02
140	GO:0006631: fatty acid metabolic process	3.27E-02
141	GO:0009640: photomorphogenesis	3.46E-02
142	GO:0008283: cell proliferation	3.46E-02
143	GO:0010114: response to red light	3.46E-02
144	GO:0042546: cell wall biogenesis	3.56E-02
145	GO:0009644: response to high light intensity	3.66E-02
146	GO:0042538: hyperosmotic salinity response	4.07E-02
147	GO:0006397: mRNA processing	4.21E-02
148	GO:0009793: embryo development ending in seed dormancy	4.22E-02
149	GO:0006364: rRNA processing	4.28E-02
150	GO:0009585: red, far-red light phototransduction	4.28E-02
151	GO:0006417: regulation of translation	4.60E-02
152	GO:0009909: regulation of flower development	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0004401: histidinol-phosphatase activity	0.00E+00
2	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
3	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
4	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
5	GO:0042834: peptidoglycan binding	1.58E-04
6	GO:0004813: alanine-tRNA ligase activity	1.58E-04
7	GO:0005290: L-histidine transmembrane transporter activity	1.58E-04
8	GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity	1.58E-04
9	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	1.58E-04
10	GO:0003879: ATP phosphoribosyltransferase activity	1.58E-04
11	GO:0010347: L-galactose-1-phosphate phosphatase activity	1.58E-04
12	GO:0052832: inositol monophosphate 3-phosphatase activity	3.60E-04
13	GO:0008934: inositol monophosphate 1-phosphatase activity	3.60E-04
14	GO:0052833: inositol monophosphate 4-phosphatase activity	3.60E-04
15	GO:0000064: L-ornithine transmembrane transporter activity	3.60E-04
16	GO:0050736: O-malonyltransferase activity	3.60E-04
17	GO:0009884: cytokinin receptor activity	3.60E-04
18	GO:0050017: L-3-cyanoalanine synthase activity	3.60E-04
19	GO:0043425: bHLH transcription factor binding	3.60E-04
20	GO:0004047: aminomethyltransferase activity	3.60E-04
21	GO:0004766: spermidine synthase activity	3.60E-04
22	GO:0045548: phenylalanine ammonia-lyase activity	5.89E-04
23	GO:0004148: dihydrolipoyl dehydrogenase activity	5.89E-04
24	GO:0005034: osmosensor activity	5.89E-04
25	GO:0005354: galactose transmembrane transporter activity	8.43E-04
26	GO:0015181: arginine transmembrane transporter activity	8.43E-04
27	GO:0016149: translation release factor activity, codon specific	8.43E-04
28	GO:0009882: blue light photoreceptor activity	8.43E-04
29	GO:0015189: L-lysine transmembrane transporter activity	8.43E-04
30	GO:0052793: pectin acetylesterase activity	1.12E-03
31	GO:0070628: proteasome binding	1.12E-03
32	GO:0042277: peptide binding	1.12E-03
33	GO:0005471: ATP:ADP antiporter activity	1.41E-03
34	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.53E-03
35	GO:0004709: MAP kinase kinase kinase activity	1.74E-03
36	GO:0031593: polyubiquitin binding	1.74E-03
37	GO:2001070: starch binding	1.74E-03
38	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.09E-03
39	GO:0019900: kinase binding	2.09E-03
40	GO:0004124: cysteine synthase activity	2.09E-03
41	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.11E-03
42	GO:0005096: GTPase activator activity	2.77E-03
43	GO:0042802: identical protein binding	3.13E-03
44	GO:0071949: FAD binding	3.67E-03
45	GO:0003747: translation release factor activity	3.67E-03
46	GO:0004673: protein histidine kinase activity	4.58E-03
47	GO:0003691: double-stranded telomeric DNA binding	5.05E-03
48	GO:0000049: tRNA binding	5.55E-03
49	GO:0003690: double-stranded DNA binding	5.98E-03
50	GO:0000155: phosphorelay sensor kinase activity	6.06E-03
51	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.59E-03
52	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	7.69E-03
53	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	7.69E-03
54	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	7.69E-03
55	GO:0043130: ubiquitin binding	8.27E-03
56	GO:0043424: protein histidine kinase binding	8.86E-03
57	GO:0005515: protein binding	9.54E-03
58	GO:0005524: ATP binding	1.20E-02
59	GO:0010181: FMN binding	1.41E-02
60	GO:0005355: glucose transmembrane transporter activity	1.41E-02
61	GO:0050662: coenzyme binding	1.41E-02
62	GO:0019901: protein kinase binding	1.48E-02
63	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.56E-02
64	GO:0004518: nuclease activity	1.63E-02
65	GO:0000156: phosphorelay response regulator activity	1.71E-02
66	GO:0051015: actin filament binding	1.71E-02
67	GO:0016301: kinase activity	1.76E-02
68	GO:0003684: damaged DNA binding	1.78E-02
69	GO:0003723: RNA binding	1.80E-02
70	GO:0005200: structural constituent of cytoskeleton	1.86E-02
71	GO:0016597: amino acid binding	1.94E-02
72	GO:0051213: dioxygenase activity	2.02E-02
73	GO:0004672: protein kinase activity	2.17E-02
74	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.27E-02
75	GO:0016740: transferase activity	2.31E-02
76	GO:0050897: cobalt ion binding	2.71E-02
77	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.89E-02
78	GO:0052689: carboxylic ester hydrolase activity	3.03E-02
79	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.08E-02
80	GO:0004871: signal transducer activity	3.43E-02
81	GO:0043621: protein self-association	3.66E-02
82	GO:0035091: phosphatidylinositol binding	3.66E-02
83	GO:0003924: GTPase activity	4.03E-02
84	GO:0004519: endonuclease activity	4.38E-02
85	GO:0003777: microtubule motor activity	4.60E-02
86	GO:0031625: ubiquitin protein ligase binding	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0016605: PML body	5.89E-04
2	GO:0032432: actin filament bundle	8.43E-04
3	GO:0030529: intracellular ribonucleoprotein complex	2.03E-03
4	GO:0000783: nuclear telomere cap complex	3.25E-03
5	GO:0016604: nuclear body	4.12E-03
6	GO:0009505: plant-type cell wall	4.82E-03
7	GO:0005884: actin filament	5.05E-03
8	GO:0009574: preprophase band	6.06E-03
9	GO:0005578: proteinaceous extracellular matrix	6.06E-03
10	GO:0009507: chloroplast	6.41E-03
11	GO:0005886: plasma membrane	7.39E-03
12	GO:0009532: plastid stroma	9.46E-03
13	GO:0005871: kinesin complex	1.20E-02
14	GO:0005770: late endosome	1.34E-02
15	GO:0046658: anchored component of plasma membrane	1.89E-02
16	GO:0000151: ubiquitin ligase complex	2.44E-02
17	GO:0005856: cytoskeleton	3.76E-02
18	GO:0005747: mitochondrial respiratory chain complex I	4.93E-02