co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G49740

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010966: regulation of phosphate transport	0.00E+00
2	GO:0009904: chloroplast accumulation movement	9.89E-07
3	GO:0010190: cytochrome b6f complex assembly	1.55E-06
4	GO:0009903: chloroplast avoidance movement	2.29E-06
5	GO:0000481: maturation of 5S rRNA	1.97E-05
6	GO:0071461: cellular response to redox state	1.97E-05
7	GO:0034337: RNA folding	1.97E-05
8	GO:0010362: negative regulation of anion channel activity by blue light	1.97E-05
9	GO:0080005: photosystem stoichiometry adjustment	5.10E-05
10	GO:0010155: regulation of proton transport	5.10E-05
11	GO:0000913: preprophase band assembly	9.05E-05
12	GO:0031022: nuclear migration along microfilament	9.05E-05
13	GO:0071805: potassium ion transmembrane transport	1.23E-04
14	GO:0010731: protein glutathionylation	1.36E-04
15	GO:2001141: regulation of RNA biosynthetic process	1.36E-04
16	GO:0080170: hydrogen peroxide transmembrane transport	1.36E-04
17	GO:0030104: water homeostasis	1.86E-04
18	GO:0006555: methionine metabolic process	2.97E-04
19	GO:0032508: DNA duplex unwinding	4.84E-04
20	GO:0071482: cellular response to light stimulus	5.50E-04
21	GO:0034765: regulation of ion transmembrane transport	6.19E-04
22	GO:0009638: phototropism	6.90E-04
23	GO:0035999: tetrahydrofolate interconversion	6.90E-04
24	GO:0006352: DNA-templated transcription, initiation	8.37E-04
25	GO:0009684: indoleacetic acid biosynthetic process	8.37E-04
26	GO:0006413: translational initiation	9.14E-04
27	GO:0009785: blue light signaling pathway	9.90E-04
28	GO:0010207: photosystem II assembly	1.07E-03
29	GO:0042343: indole glucosinolate metabolic process	1.15E-03
30	GO:0098542: defense response to other organism	1.50E-03
31	GO:0006730: one-carbon metabolic process	1.59E-03
32	GO:0006817: phosphate ion transport	1.78E-03
33	GO:0070417: cellular response to cold	1.88E-03
34	GO:0034220: ion transmembrane transport	1.98E-03
35	GO:0042391: regulation of membrane potential	1.98E-03
36	GO:0006662: glycerol ether metabolic process	2.08E-03
37	GO:0007018: microtubule-based movement	2.18E-03
38	GO:0006810: transport	2.22E-03
39	GO:0010583: response to cyclopentenone	2.50E-03
40	GO:0016032: viral process	2.50E-03
41	GO:0055114: oxidation-reduction process	2.80E-03
42	GO:0000910: cytokinesis	2.95E-03
43	GO:0010411: xyloglucan metabolic process	3.43E-03
44	GO:0018298: protein-chromophore linkage	3.68E-03
45	GO:0000160: phosphorelay signal transduction system	3.80E-03
46	GO:0006811: ion transport	3.93E-03
47	GO:0010119: regulation of stomatal movement	4.06E-03
48	GO:0009637: response to blue light	4.32E-03
49	GO:0034599: cellular response to oxidative stress	4.45E-03
50	GO:0042546: cell wall biogenesis	5.28E-03
51	GO:0009636: response to toxic substance	5.56E-03
52	GO:0006813: potassium ion transport	6.31E-03
53	GO:0009909: regulation of flower development	6.76E-03
54	GO:0007623: circadian rhythm	1.18E-02
55	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.28E-02
56	GO:0009658: chloroplast organization	1.61E-02
57	GO:0010200: response to chitin	1.92E-02
58	GO:0046777: protein autophosphorylation	1.97E-02
59	GO:0044550: secondary metabolite biosynthetic process	1.99E-02
60	GO:0009737: response to abscisic acid	2.03E-02
61	GO:0045454: cell redox homeostasis	2.13E-02
62	GO:0008152: metabolic process	2.65E-02
63	GO:0009416: response to light stimulus	3.72E-02
64	GO:0035556: intracellular signal transduction	3.87E-02
65	GO:0006457: protein folding	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
2	GO:0009673: low-affinity phosphate transmembrane transporter activity	0.00E+00
3	GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity	1.97E-05
4	GO:0080045: quercetin 3'-O-glucosyltransferase activity	5.10E-05
5	GO:0009882: blue light photoreceptor activity	1.36E-04
6	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.86E-04
7	GO:0001053: plastid sigma factor activity	1.86E-04
8	GO:0016987: sigma factor activity	1.86E-04
9	GO:0004040: amidase activity	2.40E-04
10	GO:0080046: quercetin 4'-O-glucosyltransferase activity	2.97E-04
11	GO:0000293: ferric-chelate reductase activity	2.97E-04
12	GO:0005242: inward rectifier potassium channel activity	3.57E-04
13	GO:0005315: inorganic phosphate transmembrane transporter activity	9.90E-04
14	GO:0031072: heat shock protein binding	9.90E-04
15	GO:0000155: phosphorelay sensor kinase activity	9.90E-04
16	GO:0004565: beta-galactosidase activity	9.90E-04
17	GO:0042802: identical protein binding	1.22E-03
18	GO:0015079: potassium ion transmembrane transporter activity	1.41E-03
19	GO:0047134: protein-disulfide reductase activity	1.88E-03
20	GO:0005249: voltage-gated potassium channel activity	1.98E-03
21	GO:0030551: cyclic nucleotide binding	1.98E-03
22	GO:0004791: thioredoxin-disulfide reductase activity	2.18E-03
23	GO:0010181: FMN binding	2.18E-03
24	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.40E-03
25	GO:0048038: quinone binding	2.40E-03
26	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.61E-03
27	GO:0015250: water channel activity	3.07E-03
28	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.43E-03
29	GO:0003993: acid phosphatase activity	4.45E-03
30	GO:0004364: glutathione transferase activity	4.99E-03
31	GO:0015293: symporter activity	5.56E-03
32	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	6.31E-03
33	GO:0003777: microtubule motor activity	6.76E-03
34	GO:0015171: amino acid transmembrane transporter activity	6.76E-03
35	GO:0080043: quercetin 3-O-glucosyltransferase activity	7.56E-03
36	GO:0080044: quercetin 7-O-glucosyltransferase activity	7.56E-03
37	GO:0022857: transmembrane transporter activity	7.72E-03
38	GO:0051082: unfolded protein binding	8.05E-03
39	GO:0015035: protein disulfide oxidoreductase activity	8.22E-03
40	GO:0008017: microtubule binding	1.22E-02
41	GO:0016491: oxidoreductase activity	1.25E-02
42	GO:0008194: UDP-glycosyltransferase activity	1.28E-02
43	GO:0003743: translation initiation factor activity	1.32E-02
44	GO:0003729: mRNA binding	1.42E-02
45	GO:0061630: ubiquitin protein ligase activity	1.94E-02
46	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.25E-02
47	GO:0003924: GTPase activity	2.47E-02
48	GO:0016887: ATPase activity	3.38E-02
49	GO:0016740: transferase activity	4.29E-02
50	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.54E-02
51	GO:0005507: copper ion binding	4.79E-02
52	GO:0019825: oxygen binding	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	2.29E-07
2	GO:0043674: columella	1.97E-05
3	GO:0009898: cytoplasmic side of plasma membrane	1.86E-04
4	GO:0042807: central vacuole	4.19E-04
5	GO:0009986: cell surface	4.19E-04
6	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	6.19E-04
7	GO:0032040: small-subunit processome	9.12E-04
8	GO:0005871: kinesin complex	1.88E-03
9	GO:0009941: chloroplast envelope	1.94E-03
10	GO:0009504: cell plate	2.29E-03
11	GO:0005773: vacuole	2.33E-03
12	GO:0005694: chromosome	2.50E-03
13	GO:0009570: chloroplast stroma	3.22E-03
14	GO:0005887: integral component of plasma membrane	3.61E-03
15	GO:0009535: chloroplast thylakoid membrane	3.78E-03
16	GO:0005819: spindle	4.58E-03
17	GO:0031977: thylakoid lumen	4.86E-03
18	GO:0005886: plasma membrane	6.03E-03
19	GO:0009706: chloroplast inner membrane	8.05E-03
20	GO:0005623: cell	9.60E-03
21	GO:0009524: phragmoplast	9.78E-03
22	GO:0016021: integral component of membrane	1.14E-02
23	GO:0009705: plant-type vacuole membrane	1.18E-02
24	GO:0009505: plant-type cell wall	1.19E-02
25	GO:0005874: microtubule	1.83E-02
26	GO:0016020: membrane	2.56E-02
27	GO:0043231: intracellular membrane-bounded organelle	2.65E-02
28	GO:0005829: cytosol	3.02E-02
29	GO:0005774: vacuolar membrane	3.31E-02
30	GO:0048046: apoplast	3.47E-02
31	GO:0009534: chloroplast thylakoid	4.26E-02