co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G49555

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009606: tropism	0.00E+00
2	GO:0007389: pattern specification process	4.53E-05
3	GO:0033206: meiotic cytokinesis	7.39E-05
4	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	7.39E-05
5	GO:0010275: NAD(P)H dehydrogenase complex assembly	1.77E-04
6	GO:0048255: mRNA stabilization	1.77E-04
7	GO:0080175: phragmoplast microtubule organization	1.77E-04
8	GO:0010115: regulation of abscisic acid biosynthetic process	1.77E-04
9	GO:0010541: acropetal auxin transport	1.77E-04
10	GO:0006013: mannose metabolic process	2.99E-04
11	GO:0010082: regulation of root meristem growth	3.14E-04
12	GO:0009650: UV protection	4.32E-04
13	GO:0002229: defense response to oomycetes	5.29E-04
14	GO:0010252: auxin homeostasis	6.38E-04
15	GO:0051225: spindle assembly	7.29E-04
16	GO:0071493: cellular response to UV-B	7.29E-04
17	GO:0016558: protein import into peroxisome matrix	7.29E-04
18	GO:0006561: proline biosynthetic process	8.91E-04
19	GO:0009959: negative gravitropism	8.91E-04
20	GO:0042176: regulation of protein catabolic process	8.91E-04
21	GO:0010315: auxin efflux	8.91E-04
22	GO:0009088: threonine biosynthetic process	1.06E-03
23	GO:2000033: regulation of seed dormancy process	1.06E-03
24	GO:0010044: response to aluminum ion	1.24E-03
25	GO:0006401: RNA catabolic process	1.24E-03
26	GO:0048766: root hair initiation	1.43E-03
27	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	1.43E-03
28	GO:0009926: auxin polar transport	1.56E-03
29	GO:0009827: plant-type cell wall modification	1.63E-03
30	GO:0009736: cytokinin-activated signaling pathway	2.08E-03
31	GO:0009688: abscisic acid biosynthetic process	2.28E-03
32	GO:0009750: response to fructose	2.51E-03
33	GO:0010540: basipetal auxin transport	3.25E-03
34	GO:2000377: regulation of reactive oxygen species metabolic process	4.06E-03
35	GO:0009863: salicylic acid mediated signaling pathway	4.06E-03
36	GO:0010187: negative regulation of seed germination	4.06E-03
37	GO:0009693: ethylene biosynthetic process	5.23E-03
38	GO:0006284: base-excision repair	5.54E-03
39	GO:0010182: sugar mediated signaling pathway	6.51E-03
40	GO:0009958: positive gravitropism	6.51E-03
41	GO:0006635: fatty acid beta-oxidation	7.53E-03
42	GO:0009630: gravitropism	7.89E-03
43	GO:0009639: response to red or far red light	8.61E-03
44	GO:0010029: regulation of seed germination	1.01E-02
45	GO:0008219: cell death	1.17E-02
46	GO:0048767: root hair elongation	1.22E-02
47	GO:0000160: phosphorelay signal transduction system	1.22E-02
48	GO:0010218: response to far red light	1.26E-02
49	GO:0016567: protein ubiquitination	1.36E-02
50	GO:0009853: photorespiration	1.39E-02
51	GO:0009867: jasmonic acid mediated signaling pathway	1.39E-02
52	GO:0006355: regulation of transcription, DNA-templated	1.45E-02
53	GO:0048364: root development	1.50E-02
54	GO:0006260: DNA replication	1.90E-02
55	GO:0042538: hyperosmotic salinity response	1.95E-02
56	GO:0009734: auxin-activated signaling pathway	2.03E-02
57	GO:0006364: rRNA processing	2.05E-02
58	GO:0051603: proteolysis involved in cellular protein catabolic process	2.10E-02
59	GO:0043086: negative regulation of catalytic activity	2.31E-02
60	GO:0006351: transcription, DNA-templated	2.45E-02
61	GO:0009740: gibberellic acid mediated signaling pathway	2.53E-02
62	GO:0009416: response to light stimulus	2.55E-02
63	GO:0035556: intracellular signal transduction	2.70E-02
64	GO:0055085: transmembrane transport	3.24E-02
65	GO:0007623: circadian rhythm	3.89E-02
66	GO:0010150: leaf senescence	3.89E-02
67	GO:0009451: RNA modification	3.96E-02
68	GO:0010228: vegetative to reproductive phase transition of meristem	4.02E-02
69	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.22E-02
70	GO:0006508: proteolysis	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0033947: mannosylglycoprotein endo-beta-mannosidase activity	0.00E+00
2	GO:0008859: exoribonuclease II activity	0.00E+00
3	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
4	GO:0009672: auxin:proton symporter activity	6.89E-05
5	GO:0017091: AU-rich element binding	7.39E-05
6	GO:0004795: threonine synthase activity	7.39E-05
7	GO:0015075: ion transmembrane transporter activity	7.39E-05
8	GO:0010329: auxin efflux transmembrane transporter activity	1.31E-04
9	GO:0008725: DNA-3-methyladenine glycosylase activity	7.29E-04
10	GO:0008236: serine-type peptidase activity	9.27E-04
11	GO:0004559: alpha-mannosidase activity	1.06E-03
12	GO:0019899: enzyme binding	1.24E-03
13	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	1.63E-03
14	GO:0000989: transcription factor activity, transcription factor binding	1.83E-03
15	GO:0015020: glucuronosyltransferase activity	2.28E-03
16	GO:0004713: protein tyrosine kinase activity	2.28E-03
17	GO:0008327: methyl-CpG binding	2.51E-03
18	GO:0009982: pseudouridine synthase activity	3.00E-03
19	GO:0000175: 3'-5'-exoribonuclease activity	3.00E-03
20	GO:0004022: alcohol dehydrogenase (NAD) activity	3.00E-03
21	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.25E-03
22	GO:0004857: enzyme inhibitor activity	4.06E-03
23	GO:0004540: ribonuclease activity	4.63E-03
24	GO:0008080: N-acetyltransferase activity	6.51E-03
25	GO:0000156: phosphorelay response regulator activity	8.25E-03
26	GO:0004806: triglyceride lipase activity	1.09E-02
27	GO:0004721: phosphoprotein phosphatase activity	1.09E-02
28	GO:0005215: transporter activity	1.34E-02
29	GO:0004185: serine-type carboxypeptidase activity	1.66E-02
30	GO:0051537: 2 iron, 2 sulfur cluster binding	1.76E-02
31	GO:0043621: protein self-association	1.76E-02
32	GO:0004672: protein kinase activity	1.92E-02
33	GO:0003676: nucleic acid binding	2.14E-02
34	GO:0003777: microtubule motor activity	2.21E-02
35	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.30E-02
36	GO:0008270: zinc ion binding	2.31E-02
37	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.47E-02
38	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.47E-02
39	GO:0051082: unfolded protein binding	2.64E-02
40	GO:0004674: protein serine/threonine kinase activity	2.79E-02
41	GO:0016758: transferase activity, transferring hexosyl groups	3.04E-02
42	GO:0016740: transferase activity	3.11E-02
43	GO:0003677: DNA binding	3.32E-02
44	GO:0004252: serine-type endopeptidase activity	3.33E-02
45	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.37E-02
46	GO:0030246: carbohydrate binding	3.43E-02
47	GO:0015144: carbohydrate transmembrane transporter activity	3.52E-02
48	GO:0046910: pectinesterase inhibitor activity	3.70E-02
49	GO:0005351: sugar:proton symporter activity	3.83E-02
50	GO:0008017: microtubule binding	4.02E-02
51	GO:0008194: UDP-glycosyltransferase activity	4.22E-02

Rank	GO Term	Adjusted P value
1	GO:0012506: vesicle membrane	7.39E-05
2	GO:0010370: perinucleolar chromocenter	7.39E-05
3	GO:0016328: lateral plasma membrane	2.99E-04
4	GO:0070652: HAUS complex	2.99E-04
5	GO:0000178: exosome (RNase complex)	7.29E-04
6	GO:0009986: cell surface	1.24E-03
7	GO:0005819: spindle	1.32E-03
8	GO:0005720: nuclear heterochromatin	1.83E-03
9	GO:0045271: respiratory chain complex I	4.34E-03
10	GO:0005874: microtubule	9.37E-03
11	GO:0000932: P-body	9.74E-03
12	GO:0031977: thylakoid lumen	1.57E-02
13	GO:0031966: mitochondrial membrane	1.95E-02
14	GO:0005747: mitochondrial respiratory chain complex I	2.37E-02
15	GO:0005834: heterotrimeric G-protein complex	2.42E-02
16	GO:0009543: chloroplast thylakoid lumen	3.10E-02
17	GO:0005773: vacuole	3.11E-02
18	GO:0009524: phragmoplast	3.21E-02
19	GO:0005802: trans-Golgi network	4.08E-02
20	GO:0005768: endosome	4.63E-02
21	GO:0046658: anchored component of plasma membrane	4.75E-02