Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G48540

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032497: detection of lipopolysaccharide0.00E+00
2GO:2001143: N-methylnicotinate transport0.00E+00
3GO:0070212: protein poly-ADP-ribosylation0.00E+00
4GO:2001142: nicotinate transport0.00E+00
5GO:0070588: calcium ion transmembrane transport2.81E-06
6GO:0009626: plant-type hypersensitive response1.35E-05
7GO:0008219: cell death5.43E-05
8GO:0015784: GDP-mannose transport6.91E-05
9GO:0051245: negative regulation of cellular defense response6.91E-05
10GO:0099132: ATP hydrolysis coupled cation transmembrane transport6.91E-05
11GO:0043069: negative regulation of programmed cell death7.43E-05
12GO:0002221: pattern recognition receptor signaling pathway1.66E-04
13GO:0015783: GDP-fucose transport2.81E-04
14GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity2.81E-04
15GO:0010581: regulation of starch biosynthetic process2.81E-04
16GO:0002230: positive regulation of defense response to virus by host2.81E-04
17GO:0006612: protein targeting to membrane4.06E-04
18GO:0015696: ammonium transport4.06E-04
19GO:0000187: activation of MAPK activity4.06E-04
20GO:0046713: borate transport4.06E-04
21GO:0072334: UDP-galactose transmembrane transport4.06E-04
22GO:2000038: regulation of stomatal complex development5.42E-04
23GO:0080142: regulation of salicylic acid biosynthetic process5.42E-04
24GO:0046345: abscisic acid catabolic process5.42E-04
25GO:0006085: acetyl-CoA biosynthetic process5.42E-04
26GO:0072488: ammonium transmembrane transport5.42E-04
27GO:0010363: regulation of plant-type hypersensitive response5.42E-04
28GO:0051607: defense response to virus6.55E-04
29GO:0007166: cell surface receptor signaling pathway6.72E-04
30GO:0045487: gibberellin catabolic process6.87E-04
31GO:2000037: regulation of stomatal complex patterning9.99E-04
32GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response9.99E-04
33GO:0015937: coenzyme A biosynthetic process1.17E-03
34GO:0046470: phosphatidylcholine metabolic process1.17E-03
35GO:1900056: negative regulation of leaf senescence1.17E-03
36GO:2000031: regulation of salicylic acid mediated signaling pathway1.53E-03
37GO:0071482: cellular response to light stimulus1.53E-03
38GO:0048193: Golgi vesicle transport1.53E-03
39GO:0010112: regulation of systemic acquired resistance1.73E-03
40GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.93E-03
41GO:0016310: phosphorylation2.13E-03
42GO:0007064: mitotic sister chromatid cohesion2.14E-03
43GO:0009870: defense response signaling pathway, resistance gene-dependent2.14E-03
44GO:0009682: induced systemic resistance2.36E-03
45GO:0010229: inflorescence development2.82E-03
46GO:0007034: vacuolar transport3.06E-03
47GO:0002237: response to molecule of bacterial origin3.06E-03
48GO:0010053: root epidermal cell differentiation3.30E-03
49GO:0042343: indole glucosinolate metabolic process3.30E-03
50GO:0006071: glycerol metabolic process3.56E-03
51GO:0009863: salicylic acid mediated signaling pathway3.81E-03
52GO:0031408: oxylipin biosynthetic process4.35E-03
53GO:0098542: defense response to other organism4.35E-03
54GO:0048278: vesicle docking4.35E-03
55GO:0009814: defense response, incompatible interaction4.63E-03
56GO:2000022: regulation of jasmonic acid mediated signaling pathway4.63E-03
57GO:0031348: negative regulation of defense response4.63E-03
58GO:0071456: cellular response to hypoxia4.63E-03
59GO:0009625: response to insect4.91E-03
60GO:0010227: floral organ abscission4.91E-03
61GO:0009686: gibberellin biosynthetic process4.91E-03
62GO:0006468: protein phosphorylation4.92E-03
63GO:0000271: polysaccharide biosynthetic process5.80E-03
64GO:0045489: pectin biosynthetic process6.11E-03
65GO:0048544: recognition of pollen6.42E-03
66GO:0061025: membrane fusion6.42E-03
67GO:0002229: defense response to oomycetes7.07E-03
68GO:0010193: response to ozone7.07E-03
69GO:0016032: viral process7.40E-03
70GO:0009639: response to red or far red light8.08E-03
71GO:0006952: defense response8.84E-03
72GO:0080167: response to karrikin8.84E-03
73GO:0001666: response to hypoxia9.13E-03
74GO:0009615: response to virus9.13E-03
75GO:0009816: defense response to bacterium, incompatible interaction9.50E-03
76GO:0044550: secondary metabolite biosynthetic process9.62E-03
77GO:0009627: systemic acquired resistance9.87E-03
78GO:0006906: vesicle fusion9.87E-03
79GO:0016049: cell growth1.06E-02
80GO:0050832: defense response to fungus1.14E-02
81GO:0016042: lipid catabolic process1.27E-02
82GO:0009867: jasmonic acid mediated signaling pathway1.30E-02
83GO:0045087: innate immune response1.30E-02
84GO:0016051: carbohydrate biosynthetic process1.30E-02
85GO:0006629: lipid metabolic process1.31E-02
86GO:0006887: exocytosis1.47E-02
87GO:0008643: carbohydrate transport1.65E-02
88GO:0000165: MAPK cascade1.78E-02
89GO:0031347: regulation of defense response1.78E-02
90GO:0042538: hyperosmotic salinity response1.83E-02
91GO:0009624: response to nematode2.47E-02
92GO:0009742: brassinosteroid mediated signaling pathway2.58E-02
93GO:0006470: protein dephosphorylation4.01E-02
94GO:0009617: response to bacterium4.14E-02
95GO:0010468: regulation of gene expression4.14E-02
96GO:0016567: protein ubiquitination4.23E-02
97GO:0042742: defense response to bacterium4.69E-02
RankGO TermAdjusted P value
1GO:0090417: N-methylnicotinate transporter activity0.00E+00
2GO:0090416: nicotinate transporter activity0.00E+00
3GO:0005458: GDP-mannose transmembrane transporter activity0.00E+00
4GO:0005388: calcium-transporting ATPase activity1.83E-06
5GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity6.91E-05
6GO:0046027: phospholipid:diacylglycerol acyltransferase activity6.91E-05
7GO:0015085: calcium ion transmembrane transporter activity6.91E-05
8GO:0080042: ADP-glucose pyrophosphohydrolase activity6.91E-05
9GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity6.91E-05
10GO:0080041: ADP-ribose pyrophosphohydrolase activity1.66E-04
11GO:0004594: pantothenate kinase activity1.66E-04
12GO:0017110: nucleoside-diphosphatase activity1.66E-04
13GO:0005457: GDP-fucose transmembrane transporter activity2.81E-04
14GO:0016301: kinase activity2.94E-04
15GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity4.06E-04
16GO:0004675: transmembrane receptor protein serine/threonine kinase activity5.21E-04
17GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity5.42E-04
18GO:0047631: ADP-ribose diphosphatase activity6.87E-04
19GO:0010294: abscisic acid glucosyltransferase activity6.87E-04
20GO:0008374: O-acyltransferase activity6.87E-04
21GO:0005459: UDP-galactose transmembrane transporter activity6.87E-04
22GO:0005524: ATP binding8.30E-04
23GO:0000210: NAD+ diphosphatase activity8.40E-04
24GO:0008519: ammonium transmembrane transporter activity8.40E-04
25GO:0004620: phospholipase activity1.17E-03
26GO:0005338: nucleotide-sugar transmembrane transporter activity1.17E-03
27GO:0004708: MAP kinase kinase activity1.34E-03
28GO:0004714: transmembrane receptor protein tyrosine kinase activity1.34E-03
29GO:0004630: phospholipase D activity1.53E-03
30GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity1.53E-03
31GO:0004713: protein tyrosine kinase activity2.14E-03
32GO:0047372: acylglycerol lipase activity2.36E-03
33GO:0005262: calcium channel activity2.82E-03
34GO:0004672: protein kinase activity3.93E-03
35GO:0033612: receptor serine/threonine kinase binding4.35E-03
36GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity4.63E-03
37GO:0022891: substrate-specific transmembrane transporter activity4.91E-03
38GO:0003713: transcription coactivator activity6.11E-03
39GO:0004674: protein serine/threonine kinase activity7.19E-03
40GO:0005516: calmodulin binding7.19E-03
41GO:0043531: ADP binding7.82E-03
42GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity8.42E-03
43GO:0005509: calcium ion binding9.46E-03
44GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.15E-02
45GO:0000149: SNARE binding1.38E-02
46GO:0004712: protein serine/threonine/tyrosine kinase activity1.38E-02
47GO:0005484: SNAP receptor activity1.56E-02
48GO:0051287: NAD binding1.78E-02
49GO:0016298: lipase activity1.97E-02
50GO:0008234: cysteine-type peptidase activity2.07E-02
51GO:0031625: ubiquitin protein ligase binding2.07E-02
52GO:0045735: nutrient reservoir activity2.17E-02
53GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.22E-02
54GO:0080043: quercetin 3-O-glucosyltransferase activity2.32E-02
55GO:0080044: quercetin 7-O-glucosyltransferase activity2.32E-02
56GO:0022857: transmembrane transporter activity2.37E-02
57GO:0005515: protein binding2.39E-02
58GO:0015035: protein disulfide oxidoreductase activity2.52E-02
59GO:0016758: transferase activity, transferring hexosyl groups2.84E-02
60GO:0015144: carbohydrate transmembrane transporter activity3.30E-02
61GO:0019825: oxygen binding3.31E-02
62GO:0005351: sugar:proton symporter activity3.59E-02
63GO:0008194: UDP-glycosyltransferase activity3.95E-02
64GO:0046872: metal ion binding4.00E-02
65GO:0005506: iron ion binding4.62E-02
66GO:0044212: transcription regulatory region DNA binding4.69E-02
67GO:0016757: transferase activity, transferring glycosyl groups4.84E-02
68GO:0046982: protein heterodimerization activity4.91E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane6.63E-04
2GO:0030173: integral component of Golgi membrane9.99E-04
3GO:0012505: endomembrane system2.61E-03
4GO:0016602: CCAAT-binding factor complex2.82E-03
5GO:0005887: integral component of plasma membrane3.05E-03
6GO:0030176: integral component of endoplasmic reticulum membrane3.30E-03
7GO:0043234: protein complex3.56E-03
8GO:0016021: integral component of membrane1.36E-02
9GO:0043231: intracellular membrane-bounded organelle1.44E-02
10GO:0031201: SNARE complex1.47E-02
11GO:0010008: endosome membrane2.22E-02
12GO:0009706: chloroplast inner membrane2.47E-02
13GO:0016020: membrane3.89E-02
14GO:0005783: endoplasmic reticulum4.04E-02
<
Gene type



Gene DE type