co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G48520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010541: acropetal auxin transport	1.70E-04
2	GO:0048255: mRNA stabilization	1.70E-04
3	GO:1902290: positive regulation of defense response to oomycetes	4.15E-04
4	GO:0016558: protein import into peroxisome matrix	7.00E-04
5	GO:0009616: virus induced gene silencing	7.00E-04
6	GO:0009959: negative gravitropism	8.57E-04
7	GO:0035194: posttranscriptional gene silencing by RNA	8.57E-04
8	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.02E-03
9	GO:0006880: intracellular sequestering of iron ion	1.19E-03
10	GO:0006401: RNA catabolic process	1.19E-03
11	GO:0009610: response to symbiotic fungus	1.19E-03
12	GO:0019745: pentacyclic triterpenoid biosynthetic process	1.19E-03
13	GO:0006826: iron ion transport	1.19E-03
14	GO:0034968: histone lysine methylation	1.37E-03
15	GO:0010052: guard cell differentiation	1.56E-03
16	GO:0006468: protein phosphorylation	1.59E-03
17	GO:0031347: regulation of defense response	1.77E-03
18	GO:0016571: histone methylation	1.97E-03
19	GO:0008202: steroid metabolic process	1.97E-03
20	GO:1900426: positive regulation of defense response to bacterium	1.97E-03
21	GO:0048829: root cap development	2.19E-03
22	GO:1903507: negative regulation of nucleic acid-templated transcription	2.41E-03
23	GO:0006879: cellular iron ion homeostasis	2.41E-03
24	GO:0016485: protein processing	2.41E-03
25	GO:0009718: anthocyanin-containing compound biosynthetic process	2.88E-03
26	GO:0010540: basipetal auxin transport	3.12E-03
27	GO:0016567: protein ubiquitination	3.28E-03
28	GO:0010039: response to iron ion	3.37E-03
29	GO:0080147: root hair cell development	3.89E-03
30	GO:0007010: cytoskeleton organization	3.89E-03
31	GO:0003333: amino acid transmembrane transport	4.44E-03
32	GO:0009416: response to light stimulus	4.46E-03
33	GO:2000022: regulation of jasmonic acid mediated signaling pathway	4.73E-03
34	GO:0009693: ethylene biosynthetic process	5.02E-03
35	GO:0042127: regulation of cell proliferation	5.32E-03
36	GO:0006284: base-excision repair	5.32E-03
37	GO:0009617: response to bacterium	5.68E-03
38	GO:0000271: polysaccharide biosynthetic process	5.93E-03
39	GO:0010051: xylem and phloem pattern formation	5.93E-03
40	GO:0048653: anther development	5.93E-03
41	GO:0008360: regulation of cell shape	6.24E-03
42	GO:0009958: positive gravitropism	6.24E-03
43	GO:0009741: response to brassinosteroid	6.24E-03
44	GO:0045489: pectin biosynthetic process	6.24E-03
45	GO:0055072: iron ion homeostasis	6.89E-03
46	GO:0000302: response to reactive oxygen species	7.22E-03
47	GO:0006635: fatty acid beta-oxidation	7.22E-03
48	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	7.22E-03
49	GO:0002229: defense response to oomycetes	7.22E-03
50	GO:0009639: response to red or far red light	8.25E-03
51	GO:0048366: leaf development	8.66E-03
52	GO:0010027: thylakoid membrane organization	9.34E-03
53	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	9.44E-03
54	GO:0008219: cell death	1.13E-02
55	GO:0009832: plant-type cell wall biogenesis	1.17E-02
56	GO:0010043: response to zinc ion	1.25E-02
57	GO:0006865: amino acid transport	1.29E-02
58	GO:0016051: carbohydrate biosynthetic process	1.33E-02
59	GO:0008152: metabolic process	1.49E-02
60	GO:0006897: endocytosis	1.50E-02
61	GO:0042542: response to hydrogen peroxide	1.55E-02
62	GO:0009736: cytokinin-activated signaling pathway	1.97E-02
63	GO:0006364: rRNA processing	1.97E-02
64	GO:0009908: flower development	2.17E-02
65	GO:0018105: peptidyl-serine phosphorylation	2.58E-02
66	GO:0051726: regulation of cell cycle	2.63E-02
67	GO:0042744: hydrogen peroxide catabolic process	3.25E-02
68	GO:0016036: cellular response to phosphate starvation	3.55E-02
69	GO:0010150: leaf senescence	3.73E-02
70	GO:0009451: RNA modification	3.79E-02
71	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.04E-02
72	GO:0007166: cell surface receptor signaling pathway	4.10E-02
73	GO:0071555: cell wall organization	4.84E-02
74	GO:0009826: unidimensional cell growth	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0098519: nucleotide phosphatase activity, acting on free nucleotides	0.00E+00
2	GO:0008859: exoribonuclease II activity	0.00E+00
3	GO:0016871: cycloartenol synthase activity	0.00E+00
4	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	7.07E-05
5	GO:0017091: AU-rich element binding	7.07E-05
6	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	7.07E-05
7	GO:0010429: methyl-CpNpN binding	2.86E-04
8	GO:0010428: methyl-CpNpG binding	2.86E-04
9	GO:0008199: ferric iron binding	4.15E-04
10	GO:0004322: ferroxidase activity	4.15E-04
11	GO:0010328: auxin influx transmembrane transporter activity	5.53E-04
12	GO:0008725: DNA-3-methyladenine glycosylase activity	7.00E-04
13	GO:0005524: ATP binding	9.31E-04
14	GO:0008142: oxysterol binding	1.56E-03
15	GO:0003724: RNA helicase activity	1.56E-03
16	GO:0004871: signal transducer activity	1.76E-03
17	GO:0015020: glucuronosyltransferase activity	2.19E-03
18	GO:0004713: protein tyrosine kinase activity	2.19E-03
19	GO:0008327: methyl-CpG binding	2.41E-03
20	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.54E-03
21	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.54E-03
22	GO:0009982: pseudouridine synthase activity	2.88E-03
23	GO:0000175: 3'-5'-exoribonuclease activity	2.88E-03
24	GO:0016301: kinase activity	2.98E-03
25	GO:0016758: transferase activity, transferring hexosyl groups	3.37E-03
26	GO:0003714: transcription corepressor activity	3.89E-03
27	GO:0004672: protein kinase activity	4.12E-03
28	GO:0004540: ribonuclease activity	4.44E-03
29	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	4.73E-03
30	GO:0008017: microtubule binding	4.99E-03
31	GO:0008194: UDP-glycosyltransferase activity	5.33E-03
32	GO:0018024: histone-lysine N-methyltransferase activity	5.62E-03
33	GO:0008080: N-acetyltransferase activity	6.24E-03
34	GO:0019901: protein kinase binding	6.89E-03
35	GO:0004674: protein serine/threonine kinase activity	7.59E-03
36	GO:0008237: metallopeptidase activity	8.61E-03
37	GO:0008236: serine-type peptidase activity	1.09E-02
38	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.21E-02
39	GO:0004222: metalloendopeptidase activity	1.21E-02
40	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.41E-02
41	GO:0042393: histone binding	1.46E-02
42	GO:0035091: phosphatidylinositol binding	1.68E-02
43	GO:0015293: symporter activity	1.73E-02
44	GO:0003676: nucleic acid binding	1.95E-02
45	GO:0003777: microtubule motor activity	2.11E-02
46	GO:0015171: amino acid transmembrane transporter activity	2.11E-02
47	GO:0051082: unfolded protein binding	2.53E-02
48	GO:0004386: helicase activity	2.69E-02
49	GO:0016740: transferase activity	2.93E-02
50	GO:0015144: carbohydrate transmembrane transporter activity	3.37E-02
51	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.55E-02
52	GO:0005351: sugar:proton symporter activity	3.67E-02
53	GO:0008270: zinc ion binding	4.94E-02
54	GO:0008168: methyltransferase activity	4.95E-02
55	GO:0003723: RNA binding	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0000178: exosome (RNase complex)	7.00E-04
2	GO:0010005: cortical microtubule, transverse to long axis	1.02E-03
3	GO:0005819: spindle	1.25E-03
4	GO:0000775: chromosome, centromeric region	4.73E-03
5	GO:0071944: cell periphery	7.90E-03
6	GO:0000932: P-body	9.34E-03
7	GO:0043231: intracellular membrane-bounded organelle	1.49E-02
8	GO:0031977: thylakoid lumen	1.50E-02
9	GO:0005886: plasma membrane	2.65E-02
10	GO:0009579: thylakoid	2.87E-02
11	GO:0009543: chloroplast thylakoid lumen	2.96E-02
12	GO:0009524: phragmoplast	3.08E-02
13	GO:0005759: mitochondrial matrix	3.49E-02
14	GO:0016021: integral component of membrane	4.96E-02