co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G48400

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010324: membrane invagination	0.00E+00
2	GO:2000630: positive regulation of miRNA metabolic process	0.00E+00
3	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
4	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
5	GO:2000636: positive regulation of primary miRNA processing	0.00E+00
6	GO:0071456: cellular response to hypoxia	4.96E-05
7	GO:0009643: photosynthetic acclimation	5.33E-05
8	GO:1990542: mitochondrial transmembrane transport	1.69E-04
9	GO:0048508: embryonic meristem development	1.69E-04
10	GO:0015760: glucose-6-phosphate transport	1.69E-04
11	GO:0019567: arabinose biosynthetic process	1.69E-04
12	GO:0019305: dTDP-rhamnose biosynthetic process	1.69E-04
13	GO:0009446: putrescine biosynthetic process	3.83E-04
14	GO:0006527: arginine catabolic process	3.83E-04
15	GO:0080181: lateral root branching	3.83E-04
16	GO:0044419: interspecies interaction between organisms	3.83E-04
17	GO:0009945: radial axis specification	3.83E-04
18	GO:0015712: hexose phosphate transport	3.83E-04
19	GO:0051258: protein polymerization	3.83E-04
20	GO:0010115: regulation of abscisic acid biosynthetic process	3.83E-04
21	GO:0015865: purine nucleotide transport	3.83E-04
22	GO:0010271: regulation of chlorophyll catabolic process	3.83E-04
23	GO:0010150: leaf senescence	4.17E-04
24	GO:0006952: defense response	4.68E-04
25	GO:0009225: nucleotide-sugar metabolic process	5.27E-04
26	GO:0035436: triose phosphate transmembrane transport	6.25E-04
27	GO:0015695: organic cation transport	6.25E-04
28	GO:0010498: proteasomal protein catabolic process	6.25E-04
29	GO:0015714: phosphoenolpyruvate transport	6.25E-04
30	GO:1900055: regulation of leaf senescence	6.25E-04
31	GO:0006954: inflammatory response	6.25E-04
32	GO:2000377: regulation of reactive oxygen species metabolic process	6.49E-04
33	GO:0048194: Golgi vesicle budding	8.93E-04
34	GO:0046902: regulation of mitochondrial membrane permeability	8.93E-04
35	GO:0015696: ammonium transport	8.93E-04
36	GO:0009625: response to insect	9.28E-04
37	GO:0006979: response to oxidative stress	1.02E-03
38	GO:0042391: regulation of membrane potential	1.17E-03
39	GO:0009694: jasmonic acid metabolic process	1.18E-03
40	GO:0010109: regulation of photosynthesis	1.18E-03
41	GO:0045227: capsule polysaccharide biosynthetic process	1.18E-03
42	GO:0033320: UDP-D-xylose biosynthetic process	1.18E-03
43	GO:0072488: ammonium transmembrane transport	1.18E-03
44	GO:0033358: UDP-L-arabinose biosynthetic process	1.18E-03
45	GO:0015713: phosphoglycerate transport	1.18E-03
46	GO:0008295: spermidine biosynthetic process	1.18E-03
47	GO:0009624: response to nematode	1.30E-03
48	GO:0034052: positive regulation of plant-type hypersensitive response	1.50E-03
49	GO:0009164: nucleoside catabolic process	1.50E-03
50	GO:0009697: salicylic acid biosynthetic process	1.50E-03
51	GO:0010193: response to ozone	1.54E-03
52	GO:0009409: response to cold	1.82E-03
53	GO:0042732: D-xylose metabolic process	1.85E-03
54	GO:0006596: polyamine biosynthetic process	1.85E-03
55	GO:0071470: cellular response to osmotic stress	2.22E-03
56	GO:0009942: longitudinal axis specification	2.22E-03
57	GO:0009753: response to jasmonic acid	2.24E-03
58	GO:0071446: cellular response to salicylic acid stimulus	2.61E-03
59	GO:0050829: defense response to Gram-negative bacterium	2.61E-03
60	GO:0010928: regulation of auxin mediated signaling pathway	3.02E-03
61	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.02E-03
62	GO:0009819: drought recovery	3.02E-03
63	GO:0043068: positive regulation of programmed cell death	3.02E-03
64	GO:0010119: regulation of stomatal movement	3.33E-03
65	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.46E-03
66	GO:0009056: catabolic process	3.91E-03
67	GO:0046916: cellular transition metal ion homeostasis	3.91E-03
68	GO:0010112: regulation of systemic acquired resistance	3.91E-03
69	GO:0006897: endocytosis	4.33E-03
70	GO:0008202: steroid metabolic process	4.38E-03
71	GO:0048268: clathrin coat assembly	4.38E-03
72	GO:0010380: regulation of chlorophyll biosynthetic process	4.38E-03
73	GO:0009737: response to abscisic acid	4.45E-03
74	GO:0051707: response to other organism	4.70E-03
75	GO:0006032: chitin catabolic process	4.87E-03
76	GO:0009611: response to wounding	4.99E-03
77	GO:0009682: induced systemic resistance	5.38E-03
78	GO:0072593: reactive oxygen species metabolic process	5.38E-03
79	GO:0080167: response to karrikin	5.93E-03
80	GO:0010200: response to chitin	6.19E-03
81	GO:2000028: regulation of photoperiodism, flowering	6.46E-03
82	GO:0055046: microgametogenesis	6.46E-03
83	GO:0080188: RNA-directed DNA methylation	7.60E-03
84	GO:0016567: protein ubiquitination	8.93E-03
85	GO:0009751: response to salicylic acid	9.56E-03
86	GO:0016998: cell wall macromolecule catabolic process	1.01E-02
87	GO:0031348: negative regulation of defense response	1.08E-02
88	GO:0006012: galactose metabolic process	1.14E-02
89	GO:0009561: megagametogenesis	1.21E-02
90	GO:0009790: embryo development	1.32E-02
91	GO:0042631: cellular response to water deprivation	1.36E-02
92	GO:0000271: polysaccharide biosynthetic process	1.36E-02
93	GO:0007165: signal transduction	1.37E-02
94	GO:0045489: pectin biosynthetic process	1.43E-02
95	GO:0009646: response to absence of light	1.51E-02
96	GO:0009749: response to glucose	1.58E-02
97	GO:0000302: response to reactive oxygen species	1.66E-02
98	GO:0019761: glucosinolate biosynthetic process	1.74E-02
99	GO:0007166: cell surface receptor signaling pathway	1.79E-02
100	GO:0006470: protein dephosphorylation	1.79E-02
101	GO:0006468: protein phosphorylation	2.14E-02
102	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.24E-02
103	GO:0006950: response to stress	2.42E-02
104	GO:0010311: lateral root formation	2.70E-02
105	GO:0009832: plant-type cell wall biogenesis	2.70E-02
106	GO:0009407: toxin catabolic process	2.79E-02
107	GO:0007568: aging	2.89E-02
108	GO:0009910: negative regulation of flower development	2.89E-02
109	GO:0009631: cold acclimation	2.89E-02
110	GO:0009853: photorespiration	3.08E-02
111	GO:0009867: jasmonic acid mediated signaling pathway	3.08E-02
112	GO:0045087: innate immune response	3.08E-02
113	GO:0016051: carbohydrate biosynthetic process	3.08E-02
114	GO:0030001: metal ion transport	3.38E-02
115	GO:0015979: photosynthesis	3.42E-02
116	GO:0009744: response to sucrose	3.69E-02
117	GO:0000209: protein polyubiquitination	3.80E-02
118	GO:0007275: multicellular organism development	3.81E-02
119	GO:0009636: response to toxic substance	4.01E-02
120	GO:0006855: drug transmembrane transport	4.12E-02
121	GO:0031347: regulation of defense response	4.23E-02
122	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.23E-02
123	GO:0009664: plant-type cell wall organization	4.34E-02
124	GO:0042538: hyperosmotic salinity response	4.34E-02
125	GO:0009408: response to heat	4.41E-02
126	GO:0006486: protein glycosylation	4.57E-02
127	GO:0010224: response to UV-B	4.68E-02
128	GO:0009414: response to water deprivation	4.69E-02
129	GO:0042742: defense response to bacterium	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0080131: hydroxyjasmonate sulfotransferase activity	0.00E+00
2	GO:0004012: phospholipid-translocating ATPase activity	7.42E-05
3	GO:0019901: protein kinase binding	1.14E-04
4	GO:0019707: protein-cysteine S-acyltransferase activity	1.69E-04
5	GO:0008792: arginine decarboxylase activity	1.69E-04
6	GO:0004568: chitinase activity	2.75E-04
7	GO:0008460: dTDP-glucose 4,6-dehydratase activity	3.83E-04
8	GO:0047364: desulfoglucosinolate sulfotransferase activity	3.83E-04
9	GO:0015152: glucose-6-phosphate transmembrane transporter activity	3.83E-04
10	GO:0048531: beta-1,3-galactosyltransferase activity	3.83E-04
11	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.18E-04
12	GO:0030552: cAMP binding	5.27E-04
13	GO:0030553: cGMP binding	5.27E-04
14	GO:0008146: sulfotransferase activity	5.27E-04
15	GO:0071917: triose-phosphate transmembrane transporter activity	6.25E-04
16	GO:0005216: ion channel activity	7.14E-04
17	GO:0017077: oxidative phosphorylation uncoupler activity	8.93E-04
18	GO:0005249: voltage-gated potassium channel activity	1.17E-03
19	GO:0030551: cyclic nucleotide binding	1.17E-03
20	GO:0015120: phosphoglycerate transmembrane transporter activity	1.18E-03
21	GO:0050373: UDP-arabinose 4-epimerase activity	1.18E-03
22	GO:0047631: ADP-ribose diphosphatase activity	1.50E-03
23	GO:0005471: ATP:ADP antiporter activity	1.50E-03
24	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.50E-03
25	GO:0008519: ammonium transmembrane transporter activity	1.85E-03
26	GO:0048040: UDP-glucuronate decarboxylase activity	1.85E-03
27	GO:0000210: NAD+ diphosphatase activity	1.85E-03
28	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.98E-03
29	GO:0070403: NAD+ binding	2.22E-03
30	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.22E-03
31	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.22E-03
32	GO:0003978: UDP-glucose 4-epimerase activity	2.22E-03
33	GO:0004033: aldo-keto reductase (NADP) activity	3.02E-03
34	GO:0008135: translation factor activity, RNA binding	3.46E-03
35	GO:0008142: oxysterol binding	3.46E-03
36	GO:0005545: 1-phosphatidylinositol binding	4.87E-03
37	GO:0043531: ADP binding	5.07E-03
38	GO:0008559: xenobiotic-transporting ATPase activity	5.38E-03
39	GO:0005315: inorganic phosphate transmembrane transporter activity	6.46E-03
40	GO:0004842: ubiquitin-protein transferase activity	6.72E-03
41	GO:0004190: aspartic-type endopeptidase activity	7.60E-03
42	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.01E-02
43	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.08E-02
44	GO:0016757: transferase activity, transferring glycosyl groups	1.11E-02
45	GO:0005199: structural constituent of cell wall	1.43E-02
46	GO:0030276: clathrin binding	1.43E-02
47	GO:0001085: RNA polymerase II transcription factor binding	1.43E-02
48	GO:0015297: antiporter activity	1.49E-02
49	GO:0004197: cysteine-type endopeptidase activity	1.74E-02
50	GO:0004674: protein serine/threonine kinase activity	2.24E-02
51	GO:0008375: acetylglucosaminyltransferase activity	2.33E-02
52	GO:0000287: magnesium ion binding	2.37E-02
53	GO:0043565: sequence-specific DNA binding	2.41E-02
54	GO:0030247: polysaccharide binding	2.42E-02
55	GO:0004721: phosphoprotein phosphatase activity	2.42E-02
56	GO:0015238: drug transmembrane transporter activity	2.70E-02
57	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.89E-02
58	GO:0005516: calmodulin binding	3.36E-02
59	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.59E-02
60	GO:0004364: glutathione transferase activity	3.59E-02
61	GO:0035091: phosphatidylinositol binding	3.91E-02
62	GO:0004722: protein serine/threonine phosphatase activity	3.93E-02
63	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	3.99E-02
64	GO:0005509: calcium ion binding	4.37E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	7.82E-05
2	GO:0016021: integral component of membrane	1.44E-04
3	GO:0000138: Golgi trans cisterna	1.69E-04
4	GO:0005901: caveola	3.83E-04
5	GO:0008287: protein serine/threonine phosphatase complex	6.25E-04
6	GO:0009530: primary cell wall	6.25E-04
7	GO:0032580: Golgi cisterna membrane	1.87E-03
8	GO:0016363: nuclear matrix	2.22E-03
9	GO:0015030: Cajal body	4.38E-03
10	GO:0005740: mitochondrial envelope	4.87E-03
11	GO:0005578: proteinaceous extracellular matrix	6.46E-03
12	GO:0031012: extracellular matrix	6.46E-03
13	GO:0005769: early endosome	8.20E-03
14	GO:0005802: trans-Golgi network	9.86E-03
15	GO:0005905: clathrin-coated pit	1.01E-02
16	GO:0030136: clathrin-coated vesicle	1.28E-02
17	GO:0005887: integral component of plasma membrane	1.44E-02
18	GO:0005667: transcription factor complex	2.33E-02
19	GO:0005794: Golgi apparatus	2.57E-02
20	GO:0009506: plasmodesma	2.85E-02
21	GO:0000325: plant-type vacuole	2.89E-02
22	GO:0000786: nucleosome	2.99E-02
23	GO:0031969: chloroplast membrane	3.00E-02
24	GO:0005774: vacuolar membrane	3.23E-02
25	GO:0005743: mitochondrial inner membrane	4.11E-02
26	GO:0005768: endosome	4.24E-02
27	GO:0031966: mitochondrial membrane	4.34E-02