GO Enrichment Analysis of Co-expressed Genes with
AT5G47840
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 2 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 3 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 4 | GO:0010081: regulation of inflorescence meristem growth | 0.00E+00 |
| 5 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 6 | GO:1902183: regulation of shoot apical meristem development | 2.01E-05 |
| 7 | GO:0010158: abaxial cell fate specification | 2.01E-05 |
| 8 | GO:0010027: thylakoid membrane organization | 1.09E-04 |
| 9 | GO:2000024: regulation of leaf development | 1.17E-04 |
| 10 | GO:0010080: regulation of floral meristem growth | 1.20E-04 |
| 11 | GO:0010450: inflorescence meristem growth | 1.20E-04 |
| 12 | GO:0010289: homogalacturonan biosynthetic process | 2.77E-04 |
| 13 | GO:0010024: phytochromobilin biosynthetic process | 2.77E-04 |
| 14 | GO:0048255: mRNA stabilization | 2.77E-04 |
| 15 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.09E-04 |
| 16 | GO:0010022: meristem determinacy | 4.58E-04 |
| 17 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 4.58E-04 |
| 18 | GO:0010623: programmed cell death involved in cell development | 4.58E-04 |
| 19 | GO:0051604: protein maturation | 4.58E-04 |
| 20 | GO:0045165: cell fate commitment | 4.58E-04 |
| 21 | GO:0010431: seed maturation | 4.95E-04 |
| 22 | GO:0006096: glycolytic process | 5.72E-04 |
| 23 | GO:0042989: sequestering of actin monomers | 6.57E-04 |
| 24 | GO:1901332: negative regulation of lateral root development | 6.57E-04 |
| 25 | GO:0051513: regulation of monopolar cell growth | 6.57E-04 |
| 26 | GO:0010239: chloroplast mRNA processing | 6.57E-04 |
| 27 | GO:0016117: carotenoid biosynthetic process | 6.91E-04 |
| 28 | GO:0010154: fruit development | 8.00E-04 |
| 29 | GO:0010508: positive regulation of autophagy | 8.72E-04 |
| 30 | GO:0051781: positive regulation of cell division | 8.72E-04 |
| 31 | GO:0030041: actin filament polymerization | 1.10E-03 |
| 32 | GO:0010236: plastoquinone biosynthetic process | 1.10E-03 |
| 33 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.10E-03 |
| 34 | GO:0016123: xanthophyll biosynthetic process | 1.10E-03 |
| 35 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.35E-03 |
| 36 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.35E-03 |
| 37 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.35E-03 |
| 38 | GO:0006555: methionine metabolic process | 1.35E-03 |
| 39 | GO:1901259: chloroplast rRNA processing | 1.61E-03 |
| 40 | GO:0042372: phylloquinone biosynthetic process | 1.61E-03 |
| 41 | GO:0010019: chloroplast-nucleus signaling pathway | 1.61E-03 |
| 42 | GO:0051510: regulation of unidimensional cell growth | 1.89E-03 |
| 43 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.89E-03 |
| 44 | GO:0006353: DNA-templated transcription, termination | 2.19E-03 |
| 45 | GO:0006605: protein targeting | 2.19E-03 |
| 46 | GO:0048564: photosystem I assembly | 2.19E-03 |
| 47 | GO:0009657: plastid organization | 2.50E-03 |
| 48 | GO:0010093: specification of floral organ identity | 2.50E-03 |
| 49 | GO:0010206: photosystem II repair | 2.82E-03 |
| 50 | GO:0000373: Group II intron splicing | 2.82E-03 |
| 51 | GO:0006098: pentose-phosphate shunt | 2.82E-03 |
| 52 | GO:0035999: tetrahydrofolate interconversion | 3.16E-03 |
| 53 | GO:0009086: methionine biosynthetic process | 3.16E-03 |
| 54 | GO:0006415: translational termination | 3.88E-03 |
| 55 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.26E-03 |
| 56 | GO:0045037: protein import into chloroplast stroma | 4.26E-03 |
| 57 | GO:0010582: floral meristem determinacy | 4.26E-03 |
| 58 | GO:0009725: response to hormone | 4.64E-03 |
| 59 | GO:0006094: gluconeogenesis | 4.64E-03 |
| 60 | GO:0009933: meristem structural organization | 5.04E-03 |
| 61 | GO:0010207: photosystem II assembly | 5.04E-03 |
| 62 | GO:0090351: seedling development | 5.46E-03 |
| 63 | GO:0007010: cytoskeleton organization | 6.32E-03 |
| 64 | GO:0008299: isoprenoid biosynthetic process | 6.76E-03 |
| 65 | GO:0009845: seed germination | 7.55E-03 |
| 66 | GO:0035428: hexose transmembrane transport | 7.69E-03 |
| 67 | GO:0006730: one-carbon metabolic process | 7.69E-03 |
| 68 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 8.18E-03 |
| 69 | GO:0019722: calcium-mediated signaling | 8.66E-03 |
| 70 | GO:0009561: megagametogenesis | 8.66E-03 |
| 71 | GO:0009306: protein secretion | 8.66E-03 |
| 72 | GO:0010089: xylem development | 8.66E-03 |
| 73 | GO:0034220: ion transmembrane transport | 9.68E-03 |
| 74 | GO:0048868: pollen tube development | 1.02E-02 |
| 75 | GO:0046323: glucose import | 1.02E-02 |
| 76 | GO:0048544: recognition of pollen | 1.07E-02 |
| 77 | GO:0000302: response to reactive oxygen species | 1.18E-02 |
| 78 | GO:0005975: carbohydrate metabolic process | 1.27E-02 |
| 79 | GO:0006914: autophagy | 1.36E-02 |
| 80 | GO:0009828: plant-type cell wall loosening | 1.36E-02 |
| 81 | GO:0007267: cell-cell signaling | 1.41E-02 |
| 82 | GO:0009911: positive regulation of flower development | 1.54E-02 |
| 83 | GO:0001666: response to hypoxia | 1.54E-02 |
| 84 | GO:0016311: dephosphorylation | 1.79E-02 |
| 85 | GO:0018298: protein-chromophore linkage | 1.85E-02 |
| 86 | GO:0010311: lateral root formation | 1.92E-02 |
| 87 | GO:0006499: N-terminal protein myristoylation | 1.99E-02 |
| 88 | GO:0048527: lateral root development | 2.05E-02 |
| 89 | GO:0007568: aging | 2.05E-02 |
| 90 | GO:0016051: carbohydrate biosynthetic process | 2.19E-02 |
| 91 | GO:0045892: negative regulation of transcription, DNA-templated | 2.26E-02 |
| 92 | GO:0034599: cellular response to oxidative stress | 2.26E-02 |
| 93 | GO:0006839: mitochondrial transport | 2.41E-02 |
| 94 | GO:0009744: response to sucrose | 2.63E-02 |
| 95 | GO:0009965: leaf morphogenesis | 2.85E-02 |
| 96 | GO:0006855: drug transmembrane transport | 2.93E-02 |
| 97 | GO:0009664: plant-type cell wall organization | 3.09E-02 |
| 98 | GO:0006364: rRNA processing | 3.25E-02 |
| 99 | GO:0009909: regulation of flower development | 3.49E-02 |
| 100 | GO:0006417: regulation of translation | 3.49E-02 |
| 101 | GO:0048316: seed development | 3.74E-02 |
| 102 | GO:0009620: response to fungus | 3.91E-02 |
| 103 | GO:0006396: RNA processing | 4.26E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 2 | GO:0010357: homogentisate solanesyltransferase activity | 0.00E+00 |
| 3 | GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | 0.00E+00 |
| 4 | GO:0010355: homogentisate farnesyltransferase activity | 0.00E+00 |
| 5 | GO:0005048: signal sequence binding | 0.00E+00 |
| 6 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 7 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 8 | GO:0010356: homogentisate geranylgeranyltransferase activity | 0.00E+00 |
| 9 | GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity | 0.00E+00 |
| 10 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 11 | GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity | 1.20E-04 |
| 12 | GO:0052624: 2-phytyl-1,4-naphthoquinone methyltransferase activity | 1.20E-04 |
| 13 | GO:0031072: heat shock protein binding | 2.59E-04 |
| 14 | GO:0004802: transketolase activity | 2.77E-04 |
| 15 | GO:0010291: carotene beta-ring hydroxylase activity | 2.77E-04 |
| 16 | GO:0005528: FK506 binding | 4.09E-04 |
| 17 | GO:0004557: alpha-galactosidase activity | 4.58E-04 |
| 18 | GO:0070402: NADPH binding | 4.58E-04 |
| 19 | GO:0052692: raffinose alpha-galactosidase activity | 4.58E-04 |
| 20 | GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups | 4.58E-04 |
| 21 | GO:0003913: DNA photolyase activity | 4.58E-04 |
| 22 | GO:0016149: translation release factor activity, codon specific | 6.57E-04 |
| 23 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 8.72E-04 |
| 24 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 8.72E-04 |
| 25 | GO:0003785: actin monomer binding | 1.10E-03 |
| 26 | GO:0004462: lactoylglutathione lyase activity | 1.35E-03 |
| 27 | GO:0016688: L-ascorbate peroxidase activity | 1.35E-03 |
| 28 | GO:0004332: fructose-bisphosphate aldolase activity | 1.35E-03 |
| 29 | GO:0004130: cytochrome-c peroxidase activity | 1.35E-03 |
| 30 | GO:0008236: serine-type peptidase activity | 1.72E-03 |
| 31 | GO:0009881: photoreceptor activity | 1.89E-03 |
| 32 | GO:0004033: aldo-keto reductase (NADP) activity | 2.19E-03 |
| 33 | GO:0043022: ribosome binding | 2.19E-03 |
| 34 | GO:0008312: 7S RNA binding | 2.19E-03 |
| 35 | GO:0003747: translation release factor activity | 2.82E-03 |
| 36 | GO:0030955: potassium ion binding | 3.16E-03 |
| 37 | GO:0004743: pyruvate kinase activity | 3.16E-03 |
| 38 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.41E-03 |
| 39 | GO:0004161: dimethylallyltranstransferase activity | 3.88E-03 |
| 40 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 5.04E-03 |
| 41 | GO:0051082: unfolded protein binding | 5.58E-03 |
| 42 | GO:0033612: receptor serine/threonine kinase binding | 7.22E-03 |
| 43 | GO:0016829: lyase activity | 7.55E-03 |
| 44 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 7.69E-03 |
| 45 | GO:0030570: pectate lyase activity | 8.18E-03 |
| 46 | GO:0005102: receptor binding | 9.17E-03 |
| 47 | GO:0005355: glucose transmembrane transporter activity | 1.07E-02 |
| 48 | GO:0016853: isomerase activity | 1.07E-02 |
| 49 | GO:0004872: receptor activity | 1.13E-02 |
| 50 | GO:0015250: water channel activity | 1.54E-02 |
| 51 | GO:0004721: phosphoprotein phosphatase activity | 1.72E-02 |
| 52 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.85E-02 |
| 53 | GO:0015238: drug transmembrane transporter activity | 1.92E-02 |
| 54 | GO:0050897: cobalt ion binding | 2.05E-02 |
| 55 | GO:0030145: manganese ion binding | 2.05E-02 |
| 56 | GO:0005525: GTP binding | 2.06E-02 |
| 57 | GO:0003924: GTPase activity | 2.74E-02 |
| 58 | GO:0043621: protein self-association | 2.78E-02 |
| 59 | GO:0003779: actin binding | 4.09E-02 |
| 60 | GO:0016746: transferase activity, transferring acyl groups | 4.26E-02 |
| 61 | GO:0019843: rRNA binding | 4.89E-02 |
| 62 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.69E-18 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 3.09E-07 |
| 3 | GO:0009570: chloroplast stroma | 1.22E-06 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 1.09E-04 |
| 5 | GO:0009579: thylakoid | 1.18E-04 |
| 6 | GO:0009941: chloroplast envelope | 2.36E-04 |
| 7 | GO:0080085: signal recognition particle, chloroplast targeting | 2.77E-04 |
| 8 | GO:0031977: thylakoid lumen | 2.82E-04 |
| 9 | GO:0031969: chloroplast membrane | 5.44E-04 |
| 10 | GO:0009526: plastid envelope | 8.72E-04 |
| 11 | GO:0010287: plastoglobule | 8.92E-04 |
| 12 | GO:0055035: plastid thylakoid membrane | 1.10E-03 |
| 13 | GO:0042807: central vacuole | 1.89E-03 |
| 14 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.50E-03 |
| 15 | GO:0000326: protein storage vacuole | 2.50E-03 |
| 16 | GO:0009534: chloroplast thylakoid | 3.09E-03 |
| 17 | GO:0000311: plastid large ribosomal subunit | 4.26E-03 |
| 18 | GO:0005938: cell cortex | 4.64E-03 |
| 19 | GO:0005578: proteinaceous extracellular matrix | 4.64E-03 |
| 20 | GO:0009654: photosystem II oxygen evolving complex | 6.76E-03 |
| 21 | GO:0015629: actin cytoskeleton | 8.18E-03 |
| 22 | GO:0009505: plant-type cell wall | 9.54E-03 |
| 23 | GO:0019898: extrinsic component of membrane | 1.13E-02 |
| 24 | GO:0030529: intracellular ribonucleoprotein complex | 1.54E-02 |
| 25 | GO:0031225: anchored component of membrane | 1.93E-02 |
| 26 | GO:0015934: large ribosomal subunit | 2.05E-02 |
| 27 | GO:0009536: plastid | 3.44E-02 |
| 28 | GO:0009706: chloroplast inner membrane | 4.17E-02 |
| 29 | GO:0005623: cell | 4.99E-02 |