co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G47190

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002184: cytoplasmic translational termination	0.00E+00
2	GO:0006849: plasma membrane pyruvate transport	0.00E+00
3	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
4	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
5	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
6	GO:0005996: monosaccharide metabolic process	0.00E+00
7	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
8	GO:0033614: chloroplast proton-transporting ATP synthase complex assembly	0.00E+00
9	GO:0015717: triose phosphate transport	0.00E+00
10	GO:0032544: plastid translation	3.28E-12
11	GO:0006412: translation	8.29E-10
12	GO:0009773: photosynthetic electron transport in photosystem I	5.39E-09
13	GO:0015995: chlorophyll biosynthetic process	8.75E-08
14	GO:0015979: photosynthesis	1.51E-07
15	GO:0009772: photosynthetic electron transport in photosystem II	3.73E-06
16	GO:0042254: ribosome biogenesis	7.25E-06
17	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.59E-05
18	GO:0009735: response to cytokinin	2.74E-05
19	GO:0010207: photosystem II assembly	4.92E-05
20	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.09E-04
21	GO:1901259: chloroplast rRNA processing	1.49E-04
22	GO:0006633: fatty acid biosynthetic process	1.52E-04
23	GO:0043007: maintenance of rDNA	2.63E-04
24	GO:0010028: xanthophyll cycle	2.63E-04
25	GO:0034337: RNA folding	2.63E-04
26	GO:0005980: glycogen catabolic process	2.63E-04
27	GO:0009657: plastid organization	3.06E-04
28	GO:0006783: heme biosynthetic process	3.70E-04
29	GO:0006782: protoporphyrinogen IX biosynthetic process	5.12E-04
30	GO:0016122: xanthophyll metabolic process	5.78E-04
31	GO:0010270: photosystem II oxygen evolving complex assembly	5.78E-04
32	GO:0019388: galactose catabolic process	5.78E-04
33	GO:0018119: peptidyl-cysteine S-nitrosylation	5.92E-04
34	GO:0009409: response to cold	6.21E-04
35	GO:0009817: defense response to fungus, incompatible interaction	6.87E-04
36	GO:2001295: malonyl-CoA biosynthetic process	9.39E-04
37	GO:0090391: granum assembly	9.39E-04
38	GO:0035436: triose phosphate transmembrane transport	9.39E-04
39	GO:0006020: inositol metabolic process	1.34E-03
40	GO:0071484: cellular response to light intensity	1.34E-03
41	GO:0051085: chaperone mediated protein folding requiring cofactor	1.34E-03
42	GO:0006241: CTP biosynthetic process	1.34E-03
43	GO:0006165: nucleoside diphosphate phosphorylation	1.34E-03
44	GO:0006228: UTP biosynthetic process	1.34E-03
45	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.34E-03
46	GO:0010731: protein glutathionylation	1.34E-03
47	GO:0009590: detection of gravity	1.34E-03
48	GO:0061077: chaperone-mediated protein folding	1.43E-03
49	GO:0019464: glycine decarboxylation via glycine cleavage system	1.79E-03
50	GO:0006183: GTP biosynthetic process	1.79E-03
51	GO:0045727: positive regulation of translation	1.79E-03
52	GO:0015994: chlorophyll metabolic process	1.79E-03
53	GO:0022622: root system development	1.79E-03
54	GO:0015713: phosphoglycerate transport	1.79E-03
55	GO:0006021: inositol biosynthetic process	1.79E-03
56	GO:0009658: chloroplast organization	2.10E-03
57	GO:0006461: protein complex assembly	2.29E-03
58	GO:0016120: carotene biosynthetic process	2.29E-03
59	GO:0006564: L-serine biosynthetic process	2.29E-03
60	GO:0015986: ATP synthesis coupled proton transport	2.50E-03
61	GO:0019252: starch biosynthetic process	2.68E-03
62	GO:0006751: glutathione catabolic process	2.82E-03
63	GO:0000470: maturation of LSU-rRNA	2.82E-03
64	GO:0006828: manganese ion transport	2.82E-03
65	GO:0046855: inositol phosphate dephosphorylation	2.82E-03
66	GO:1902456: regulation of stomatal opening	2.82E-03
67	GO:0010190: cytochrome b6f complex assembly	2.82E-03
68	GO:0009643: photosynthetic acclimation	2.82E-03
69	GO:0009955: adaxial/abaxial pattern specification	3.40E-03
70	GO:0042026: protein refolding	3.40E-03
71	GO:0009854: oxidative photosynthetic carbon pathway	3.40E-03
72	GO:0032880: regulation of protein localization	4.00E-03
73	GO:0005978: glycogen biosynthetic process	4.65E-03
74	GO:0006353: DNA-templated transcription, termination	4.65E-03
75	GO:0009813: flavonoid biosynthetic process	5.67E-03
76	GO:0010206: photosystem II repair	6.03E-03
77	GO:0046916: cellular transition metal ion homeostasis	6.03E-03
78	GO:0006754: ATP biosynthetic process	6.03E-03
79	GO:0009739: response to gibberellin	6.67E-03
80	GO:0009853: photorespiration	6.83E-03
81	GO:0006810: transport	7.49E-03
82	GO:0045036: protein targeting to chloroplast	7.54E-03
83	GO:0006949: syncytium formation	7.54E-03
84	GO:0006631: fatty acid metabolic process	8.13E-03
85	GO:0006816: calcium ion transport	8.35E-03
86	GO:0006415: translational termination	8.35E-03
87	GO:0000272: polysaccharide catabolic process	8.35E-03
88	GO:0010114: response to red light	8.82E-03
89	GO:0006790: sulfur compound metabolic process	9.17E-03
90	GO:0005983: starch catabolic process	9.17E-03
91	GO:0016024: CDP-diacylglycerol biosynthetic process	9.17E-03
92	GO:2000012: regulation of auxin polar transport	1.00E-02
93	GO:0006006: glucose metabolic process	1.00E-02
94	GO:0009266: response to temperature stimulus	1.09E-02
95	GO:0010143: cutin biosynthetic process	1.09E-02
96	GO:0019253: reductive pentose-phosphate cycle	1.09E-02
97	GO:0042742: defense response to bacterium	1.16E-02
98	GO:0046854: phosphatidylinositol phosphorylation	1.18E-02
99	GO:0006364: rRNA processing	1.19E-02
100	GO:0000027: ribosomal large subunit assembly	1.38E-02
101	GO:0051017: actin filament bundle assembly	1.38E-02
102	GO:0048367: shoot system development	1.46E-02
103	GO:0006418: tRNA aminoacylation for protein translation	1.48E-02
104	GO:0009768: photosynthesis, light harvesting in photosystem I	1.48E-02
105	GO:0016114: terpenoid biosynthetic process	1.58E-02
106	GO:0009740: gibberellic acid mediated signaling pathway	1.60E-02
107	GO:0016226: iron-sulfur cluster assembly	1.68E-02
108	GO:0007005: mitochondrion organization	1.68E-02
109	GO:0006012: galactose metabolic process	1.79E-02
110	GO:0009411: response to UV	1.79E-02
111	GO:0006457: protein folding	1.86E-02
112	GO:0016117: carotenoid biosynthetic process	2.01E-02
113	GO:0008284: positive regulation of cell proliferation	2.01E-02
114	GO:0042631: cellular response to water deprivation	2.13E-02
115	GO:0009958: positive gravitropism	2.24E-02
116	GO:0006814: sodium ion transport	2.36E-02
117	GO:0005975: carbohydrate metabolic process	2.36E-02
118	GO:0009828: plant-type cell wall loosening	2.99E-02
119	GO:0010027: thylakoid membrane organization	3.39E-02
120	GO:0009607: response to biotic stimulus	3.52E-02
121	GO:0009627: systemic acquired resistance	3.66E-02
122	GO:0008219: cell death	4.09E-02
123	GO:0048481: plant ovule development	4.09E-02
124	GO:0048527: lateral root development	4.53E-02
125	GO:0010119: regulation of stomatal movement	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
2	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
3	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
4	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
5	GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity	0.00E+00
6	GO:0010303: limit dextrinase activity	0.00E+00
7	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
8	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
9	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
10	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
11	GO:0051060: pullulanase activity	0.00E+00
12	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
13	GO:0004853: uroporphyrinogen decarboxylase activity	0.00E+00
14	GO:0008887: glycerate kinase activity	0.00E+00
15	GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity	0.00E+00
16	GO:0046408: chlorophyll synthetase activity	0.00E+00
17	GO:0019843: rRNA binding	6.12E-19
18	GO:0003735: structural constituent of ribosome	2.12E-12
19	GO:0005528: FK506 binding	2.60E-06
20	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.81E-05
21	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	4.69E-05
22	GO:0045430: chalcone isomerase activity	4.69E-05
23	GO:0003989: acetyl-CoA carboxylase activity	7.43E-05
24	GO:0008184: glycogen phosphorylase activity	2.63E-04
25	GO:0004856: xylulokinase activity	2.63E-04
26	GO:0004645: phosphorylase activity	2.63E-04
27	GO:0009374: biotin binding	2.63E-04
28	GO:0004618: phosphoglycerate kinase activity	5.78E-04
29	GO:0010297: heteropolysaccharide binding	5.78E-04
30	GO:0003839: gamma-glutamylcyclotransferase activity	5.78E-04
31	GO:0004617: phosphoglycerate dehydrogenase activity	5.78E-04
32	GO:0052832: inositol monophosphate 3-phosphatase activity	5.78E-04
33	GO:0008934: inositol monophosphate 1-phosphatase activity	5.78E-04
34	GO:0052833: inositol monophosphate 4-phosphatase activity	5.78E-04
35	GO:0008967: phosphoglycolate phosphatase activity	5.78E-04
36	GO:0016630: protochlorophyllide reductase activity	5.78E-04
37	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	5.78E-04
38	GO:0004614: phosphoglucomutase activity	5.78E-04
39	GO:0047372: acylglycerol lipase activity	5.92E-04
40	GO:0031072: heat shock protein binding	7.67E-04
41	GO:0071917: triose-phosphate transmembrane transporter activity	9.39E-04
42	GO:0002161: aminoacyl-tRNA editing activity	9.39E-04
43	GO:0050833: pyruvate transmembrane transporter activity	9.39E-04
44	GO:0005504: fatty acid binding	9.39E-04
45	GO:0004075: biotin carboxylase activity	9.39E-04
46	GO:0004751: ribose-5-phosphate isomerase activity	9.39E-04
47	GO:0045174: glutathione dehydrogenase (ascorbate) activity	9.39E-04
48	GO:0008097: 5S rRNA binding	1.34E-03
49	GO:0008508: bile acid:sodium symporter activity	1.34E-03
50	GO:0004375: glycine dehydrogenase (decarboxylating) activity	1.34E-03
51	GO:0016851: magnesium chelatase activity	1.34E-03
52	GO:0016149: translation release factor activity, codon specific	1.34E-03
53	GO:0004550: nucleoside diphosphate kinase activity	1.34E-03
54	GO:0043023: ribosomal large subunit binding	1.34E-03
55	GO:0015120: phosphoglycerate transmembrane transporter activity	1.79E-03
56	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.29E-03
57	GO:0003959: NADPH dehydrogenase activity	2.29E-03
58	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	2.32E-03
59	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.82E-03
60	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.82E-03
61	GO:0004556: alpha-amylase activity	2.82E-03
62	GO:0048038: quinone binding	2.87E-03
63	GO:0051082: unfolded protein binding	2.88E-03
64	GO:0051920: peroxiredoxin activity	3.40E-03
65	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.40E-03
66	GO:0016209: antioxidant activity	4.65E-03
67	GO:0004034: aldose 1-epimerase activity	4.65E-03
68	GO:0046914: transition metal ion binding	5.32E-03
69	GO:0003747: translation release factor activity	6.03E-03
70	GO:0005384: manganese ion transmembrane transporter activity	6.77E-03
71	GO:0003723: RNA binding	7.09E-03
72	GO:0030234: enzyme regulator activity	7.54E-03
73	GO:0044183: protein binding involved in protein folding	8.35E-03
74	GO:0000049: tRNA binding	9.17E-03
75	GO:0015095: magnesium ion transmembrane transporter activity	1.00E-02
76	GO:0008083: growth factor activity	1.09E-02
77	GO:0008266: poly(U) RNA binding	1.09E-02
78	GO:0031409: pigment binding	1.28E-02
79	GO:0003824: catalytic activity	1.36E-02
80	GO:0051536: iron-sulfur cluster binding	1.38E-02
81	GO:0016491: oxidoreductase activity	1.86E-02
82	GO:0003727: single-stranded RNA binding	1.90E-02
83	GO:0004812: aminoacyl-tRNA ligase activity	2.01E-02
84	GO:0016853: isomerase activity	2.36E-02
85	GO:0050662: coenzyme binding	2.36E-02
86	GO:0051015: actin filament binding	2.86E-02
87	GO:0016791: phosphatase activity	2.99E-02
88	GO:0008237: metallopeptidase activity	3.12E-02
89	GO:0016597: amino acid binding	3.25E-02
90	GO:0016168: chlorophyll binding	3.52E-02
91	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.09E-02
92	GO:0008168: methyltransferase activity	4.37E-02
93	GO:0004222: metalloendopeptidase activity	4.38E-02

Rank	GO Term	Adjusted P value
1	GO:0009571: proplastid stroma	0.00E+00
2	GO:0005835: fatty acid synthase complex	0.00E+00
3	GO:0009575: chromoplast stroma	0.00E+00
4	GO:0009507: chloroplast	6.81E-76
5	GO:0009570: chloroplast stroma	5.10E-51
6	GO:0009941: chloroplast envelope	3.88E-42
7	GO:0009535: chloroplast thylakoid membrane	1.46E-33
8	GO:0009534: chloroplast thylakoid	3.84E-31
9	GO:0009579: thylakoid	3.38E-28
10	GO:0009543: chloroplast thylakoid lumen	4.00E-14
11	GO:0005840: ribosome	1.17E-13
12	GO:0031977: thylakoid lumen	2.59E-13
13	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.19E-09
14	GO:0010319: stromule	3.48E-08
15	GO:0031969: chloroplast membrane	8.51E-08
16	GO:0030095: chloroplast photosystem II	4.92E-05
17	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	1.09E-04
18	GO:0009547: plastid ribosome	2.63E-04
19	GO:0000427: plastid-encoded plastid RNA polymerase complex	5.78E-04
20	GO:0010287: plastoglobule	6.16E-04
21	GO:0010007: magnesium chelatase complex	9.39E-04
22	GO:0009317: acetyl-CoA carboxylase complex	9.39E-04
23	GO:0009654: photosystem II oxygen evolving complex	1.30E-03
24	GO:0005960: glycine cleavage complex	1.34E-03
25	GO:0015935: small ribosomal subunit	1.43E-03
26	GO:0009536: plastid	1.62E-03
27	GO:0009544: chloroplast ATP synthase complex	1.79E-03
28	GO:0048046: apoplast	2.42E-03
29	GO:0019898: extrinsic component of membrane	2.68E-03
30	GO:0016020: membrane	2.90E-03
31	GO:0009840: chloroplastic endopeptidase Clp complex	3.40E-03
32	GO:0009533: chloroplast stromal thylakoid	4.00E-03
33	GO:0009707: chloroplast outer membrane	5.39E-03
34	GO:0005763: mitochondrial small ribosomal subunit	6.03E-03
35	GO:0015934: large ribosomal subunit	6.23E-03
36	GO:0000311: plastid large ribosomal subunit	9.17E-03
37	GO:0032040: small-subunit processome	9.17E-03
38	GO:0009508: plastid chromosome	1.00E-02
39	GO:0000312: plastid small ribosomal subunit	1.09E-02
40	GO:0022626: cytosolic ribosome	1.18E-02
41	GO:0030076: light-harvesting complex	1.18E-02
42	GO:0022625: cytosolic large ribosomal subunit	1.41E-02
43	GO:0042651: thylakoid membrane	1.48E-02
44	GO:0009532: plastid stroma	1.58E-02
45	GO:0009706: chloroplast inner membrane	1.70E-02
46	GO:0015629: actin cytoskeleton	1.79E-02
47	GO:0009523: photosystem II	2.48E-02
48	GO:0009295: nucleoid	3.12E-02
49	GO:0005615: extracellular space	3.29E-02