| Rank | GO Term | Adjusted P value |
|---|
| 1 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 2 | GO:0001778: plasma membrane repair | 0.00E+00 |
| 3 | GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 4 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 5 | GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 6 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 7 | GO:1905255: regulation of RNA binding transcription factor activity | 0.00E+00 |
| 8 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 9 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 10 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 11 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 12 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 13 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 14 | GO:0042352: GDP-L-fucose salvage | 0.00E+00 |
| 15 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 16 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
| 17 | GO:0000455: enzyme-directed rRNA pseudouridine synthesis | 0.00E+00 |
| 18 | GO:0019323: pentose catabolic process | 0.00E+00 |
| 19 | GO:0017038: protein import | 0.00E+00 |
| 20 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 21 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 22 | GO:0009658: chloroplast organization | 1.21E-05 |
| 23 | GO:0009793: embryo development ending in seed dormancy | 1.38E-05 |
| 24 | GO:0018026: peptidyl-lysine monomethylation | 1.94E-05 |
| 25 | GO:1900871: chloroplast mRNA modification | 1.94E-05 |
| 26 | GO:1901259: chloroplast rRNA processing | 2.53E-05 |
| 27 | GO:0010027: thylakoid membrane organization | 5.48E-05 |
| 28 | GO:0046620: regulation of organ growth | 5.67E-05 |
| 29 | GO:0015995: chlorophyll biosynthetic process | 7.91E-05 |
| 30 | GO:0046739: transport of virus in multicellular host | 1.32E-04 |
| 31 | GO:1900865: chloroplast RNA modification | 1.37E-04 |
| 32 | GO:0009733: response to auxin | 2.36E-04 |
| 33 | GO:0009734: auxin-activated signaling pathway | 2.93E-04 |
| 34 | GO:0016123: xanthophyll biosynthetic process | 3.38E-04 |
| 35 | GO:0010020: chloroplast fission | 3.67E-04 |
| 36 | GO:0009959: negative gravitropism | 4.71E-04 |
| 37 | GO:0042793: transcription from plastid promoter | 4.71E-04 |
| 38 | GO:0016554: cytidine to uridine editing | 4.71E-04 |
| 39 | GO:0009416: response to light stimulus | 5.54E-04 |
| 40 | GO:0009451: RNA modification | 6.14E-04 |
| 41 | GO:0043266: regulation of potassium ion transport | 6.72E-04 |
| 42 | GO:0010063: positive regulation of trichoblast fate specification | 6.72E-04 |
| 43 | GO:0005980: glycogen catabolic process | 6.72E-04 |
| 44 | GO:0030198: extracellular matrix organization | 6.72E-04 |
| 45 | GO:0010480: microsporocyte differentiation | 6.72E-04 |
| 46 | GO:0006438: valyl-tRNA aminoacylation | 6.72E-04 |
| 47 | GO:0090558: plant epidermis development | 6.72E-04 |
| 48 | GO:0042759: long-chain fatty acid biosynthetic process | 6.72E-04 |
| 49 | GO:0043686: co-translational protein modification | 6.72E-04 |
| 50 | GO:2000021: regulation of ion homeostasis | 6.72E-04 |
| 51 | GO:0035987: endodermal cell differentiation | 6.72E-04 |
| 52 | GO:0043007: maintenance of rDNA | 6.72E-04 |
| 53 | GO:1902458: positive regulation of stomatal opening | 6.72E-04 |
| 54 | GO:0015904: tetracycline transport | 6.72E-04 |
| 55 | GO:0006419: alanyl-tRNA aminoacylation | 6.72E-04 |
| 56 | GO:0042659: regulation of cell fate specification | 6.72E-04 |
| 57 | GO:0070509: calcium ion import | 6.72E-04 |
| 58 | GO:0044262: cellular carbohydrate metabolic process | 6.72E-04 |
| 59 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 6.72E-04 |
| 60 | GO:0048437: floral organ development | 7.97E-04 |
| 61 | GO:2000070: regulation of response to water deprivation | 9.89E-04 |
| 62 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.20E-03 |
| 63 | GO:0009657: plastid organization | 1.20E-03 |
| 64 | GO:0006662: glycerol ether metabolic process | 1.36E-03 |
| 65 | GO:0010305: leaf vascular tissue pattern formation | 1.36E-03 |
| 66 | GO:0006432: phenylalanyl-tRNA aminoacylation | 1.45E-03 |
| 67 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.45E-03 |
| 68 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.45E-03 |
| 69 | GO:0080009: mRNA methylation | 1.45E-03 |
| 70 | GO:0009786: regulation of asymmetric cell division | 1.45E-03 |
| 71 | GO:0046740: transport of virus in host, cell to cell | 1.45E-03 |
| 72 | GO:0031648: protein destabilization | 1.45E-03 |
| 73 | GO:0001682: tRNA 5'-leader removal | 1.45E-03 |
| 74 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.45E-03 |
| 75 | GO:0006568: tryptophan metabolic process | 1.45E-03 |
| 76 | GO:2000123: positive regulation of stomatal complex development | 1.45E-03 |
| 77 | GO:0006420: arginyl-tRNA aminoacylation | 1.45E-03 |
| 78 | GO:0060359: response to ammonium ion | 1.45E-03 |
| 79 | GO:0031425: chloroplast RNA processing | 1.71E-03 |
| 80 | GO:0009790: embryo development | 1.76E-03 |
| 81 | GO:0048829: root cap development | 2.00E-03 |
| 82 | GO:0040008: regulation of growth | 2.19E-03 |
| 83 | GO:0009773: photosynthetic electron transport in photosystem I | 2.31E-03 |
| 84 | GO:0006696: ergosterol biosynthetic process | 2.39E-03 |
| 85 | GO:0043157: response to cation stress | 2.39E-03 |
| 86 | GO:0072661: protein targeting to plasma membrane | 2.39E-03 |
| 87 | GO:0033591: response to L-ascorbic acid | 2.39E-03 |
| 88 | GO:0090708: specification of plant organ axis polarity | 2.39E-03 |
| 89 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 2.39E-03 |
| 90 | GO:2000012: regulation of auxin polar transport | 3.02E-03 |
| 91 | GO:0010588: cotyledon vascular tissue pattern formation | 3.02E-03 |
| 92 | GO:0045454: cell redox homeostasis | 3.08E-03 |
| 93 | GO:0010207: photosystem II assembly | 3.41E-03 |
| 94 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 3.48E-03 |
| 95 | GO:0043572: plastid fission | 3.48E-03 |
| 96 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 3.48E-03 |
| 97 | GO:0031048: chromatin silencing by small RNA | 3.48E-03 |
| 98 | GO:0016556: mRNA modification | 3.48E-03 |
| 99 | GO:0010071: root meristem specification | 3.48E-03 |
| 100 | GO:0007231: osmosensory signaling pathway | 3.48E-03 |
| 101 | GO:0009102: biotin biosynthetic process | 3.48E-03 |
| 102 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 3.48E-03 |
| 103 | GO:0032456: endocytic recycling | 3.48E-03 |
| 104 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 3.48E-03 |
| 105 | GO:0009647: skotomorphogenesis | 3.48E-03 |
| 106 | GO:0010306: rhamnogalacturonan II biosynthetic process | 3.48E-03 |
| 107 | GO:0010239: chloroplast mRNA processing | 3.48E-03 |
| 108 | GO:0006612: protein targeting to membrane | 3.48E-03 |
| 109 | GO:0019048: modulation by virus of host morphology or physiology | 3.48E-03 |
| 110 | GO:0070588: calcium ion transmembrane transport | 3.83E-03 |
| 111 | GO:0006221: pyrimidine nucleotide biosynthetic process | 4.69E-03 |
| 112 | GO:0051567: histone H3-K9 methylation | 4.69E-03 |
| 113 | GO:0008295: spermidine biosynthetic process | 4.69E-03 |
| 114 | GO:0009755: hormone-mediated signaling pathway | 4.69E-03 |
| 115 | GO:0010109: regulation of photosynthesis | 4.69E-03 |
| 116 | GO:0042274: ribosomal small subunit biogenesis | 4.69E-03 |
| 117 | GO:0030104: water homeostasis | 4.69E-03 |
| 118 | GO:0033500: carbohydrate homeostasis | 4.69E-03 |
| 119 | GO:0009765: photosynthesis, light harvesting | 4.69E-03 |
| 120 | GO:2000038: regulation of stomatal complex development | 4.69E-03 |
| 121 | GO:0022622: root system development | 4.69E-03 |
| 122 | GO:0006418: tRNA aminoacylation for protein translation | 5.24E-03 |
| 123 | GO:0034599: cellular response to oxidative stress | 5.82E-03 |
| 124 | GO:0032543: mitochondrial translation | 6.03E-03 |
| 125 | GO:0045038: protein import into chloroplast thylakoid membrane | 6.03E-03 |
| 126 | GO:0016120: carotene biosynthetic process | 6.03E-03 |
| 127 | GO:0031365: N-terminal protein amino acid modification | 6.03E-03 |
| 128 | GO:0010438: cellular response to sulfur starvation | 6.03E-03 |
| 129 | GO:0032876: negative regulation of DNA endoreduplication | 6.03E-03 |
| 130 | GO:0010375: stomatal complex patterning | 6.03E-03 |
| 131 | GO:0009686: gibberellin biosynthetic process | 6.91E-03 |
| 132 | GO:0016458: gene silencing | 7.49E-03 |
| 133 | GO:0032973: amino acid export | 7.49E-03 |
| 134 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 7.49E-03 |
| 135 | GO:0000741: karyogamy | 7.49E-03 |
| 136 | GO:0010405: arabinogalactan protein metabolic process | 7.49E-03 |
| 137 | GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | 7.49E-03 |
| 138 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 7.49E-03 |
| 139 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 7.49E-03 |
| 140 | GO:0009926: auxin polar transport | 7.61E-03 |
| 141 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.97E-03 |
| 142 | GO:0016117: carotenoid biosynthetic process | 8.16E-03 |
| 143 | GO:0008033: tRNA processing | 8.83E-03 |
| 144 | GO:0010087: phloem or xylem histogenesis | 8.83E-03 |
| 145 | GO:0048280: vesicle fusion with Golgi apparatus | 9.06E-03 |
| 146 | GO:0030488: tRNA methylation | 9.06E-03 |
| 147 | GO:2000033: regulation of seed dormancy process | 9.06E-03 |
| 148 | GO:0031930: mitochondria-nucleus signaling pathway | 9.06E-03 |
| 149 | GO:0080086: stamen filament development | 9.06E-03 |
| 150 | GO:2000067: regulation of root morphogenesis | 9.06E-03 |
| 151 | GO:0042372: phylloquinone biosynthetic process | 9.06E-03 |
| 152 | GO:0009612: response to mechanical stimulus | 9.06E-03 |
| 153 | GO:0017148: negative regulation of translation | 9.06E-03 |
| 154 | GO:0010182: sugar mediated signaling pathway | 9.53E-03 |
| 155 | GO:0009646: response to absence of light | 1.03E-02 |
| 156 | GO:0010444: guard mother cell differentiation | 1.07E-02 |
| 157 | GO:0006400: tRNA modification | 1.07E-02 |
| 158 | GO:0030307: positive regulation of cell growth | 1.07E-02 |
| 159 | GO:0032880: regulation of protein localization | 1.07E-02 |
| 160 | GO:0010161: red light signaling pathway | 1.07E-02 |
| 161 | GO:0048528: post-embryonic root development | 1.07E-02 |
| 162 | GO:0043090: amino acid import | 1.07E-02 |
| 163 | GO:0010098: suspensor development | 1.07E-02 |
| 164 | GO:0030497: fatty acid elongation | 1.07E-02 |
| 165 | GO:0006605: protein targeting | 1.25E-02 |
| 166 | GO:0009819: drought recovery | 1.25E-02 |
| 167 | GO:0032875: regulation of DNA endoreduplication | 1.25E-02 |
| 168 | GO:0055075: potassium ion homeostasis | 1.25E-02 |
| 169 | GO:0000105: histidine biosynthetic process | 1.25E-02 |
| 170 | GO:0009231: riboflavin biosynthetic process | 1.25E-02 |
| 171 | GO:0048564: photosystem I assembly | 1.25E-02 |
| 172 | GO:0010439: regulation of glucosinolate biosynthetic process | 1.25E-02 |
| 173 | GO:0016032: viral process | 1.26E-02 |
| 174 | GO:1901657: glycosyl compound metabolic process | 1.35E-02 |
| 175 | GO:0016042: lipid catabolic process | 1.41E-02 |
| 176 | GO:0010100: negative regulation of photomorphogenesis | 1.44E-02 |
| 177 | GO:0007186: G-protein coupled receptor signaling pathway | 1.44E-02 |
| 178 | GO:0032544: plastid translation | 1.44E-02 |
| 179 | GO:0048367: shoot system development | 1.44E-02 |
| 180 | GO:0010099: regulation of photomorphogenesis | 1.44E-02 |
| 181 | GO:0015996: chlorophyll catabolic process | 1.44E-02 |
| 182 | GO:0006397: mRNA processing | 1.59E-02 |
| 183 | GO:0051607: defense response to virus | 1.62E-02 |
| 184 | GO:0006783: heme biosynthetic process | 1.64E-02 |
| 185 | GO:0000373: Group II intron splicing | 1.64E-02 |
| 186 | GO:0048507: meristem development | 1.64E-02 |
| 187 | GO:0000902: cell morphogenesis | 1.64E-02 |
| 188 | GO:0051865: protein autoubiquitination | 1.64E-02 |
| 189 | GO:0046685: response to arsenic-containing substance | 1.64E-02 |
| 190 | GO:0080144: amino acid homeostasis | 1.64E-02 |
| 191 | GO:0046916: cellular transition metal ion homeostasis | 1.64E-02 |
| 192 | GO:0009409: response to cold | 1.80E-02 |
| 193 | GO:2000280: regulation of root development | 1.85E-02 |
| 194 | GO:0009638: phototropism | 1.85E-02 |
| 195 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.85E-02 |
| 196 | GO:0009098: leucine biosynthetic process | 1.85E-02 |
| 197 | GO:0007275: multicellular organism development | 1.88E-02 |
| 198 | GO:0009742: brassinosteroid mediated signaling pathway | 1.89E-02 |
| 199 | GO:0006896: Golgi to vacuole transport | 2.06E-02 |
| 200 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.06E-02 |
| 201 | GO:0030422: production of siRNA involved in RNA interference | 2.06E-02 |
| 202 | GO:0045036: protein targeting to chloroplast | 2.06E-02 |
| 203 | GO:0009299: mRNA transcription | 2.06E-02 |
| 204 | GO:0010162: seed dormancy process | 2.06E-02 |
| 205 | GO:0016311: dephosphorylation | 2.13E-02 |
| 206 | GO:0009682: induced systemic resistance | 2.29E-02 |
| 207 | GO:0048229: gametophyte development | 2.29E-02 |
| 208 | GO:0006415: translational termination | 2.29E-02 |
| 209 | GO:0009073: aromatic amino acid family biosynthetic process | 2.29E-02 |
| 210 | GO:0043085: positive regulation of catalytic activity | 2.29E-02 |
| 211 | GO:0006816: calcium ion transport | 2.29E-02 |
| 212 | GO:0005975: carbohydrate metabolic process | 2.33E-02 |
| 213 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 2.52E-02 |
| 214 | GO:0005983: starch catabolic process | 2.52E-02 |
| 215 | GO:0045037: protein import into chloroplast stroma | 2.52E-02 |
| 216 | GO:0006865: amino acid transport | 2.72E-02 |
| 217 | GO:0010628: positive regulation of gene expression | 2.76E-02 |
| 218 | GO:0010102: lateral root morphogenesis | 2.76E-02 |
| 219 | GO:0050826: response to freezing | 2.76E-02 |
| 220 | GO:0009691: cytokinin biosynthetic process | 2.76E-02 |
| 221 | GO:0009718: anthocyanin-containing compound biosynthetic process | 2.76E-02 |
| 222 | GO:0010075: regulation of meristem growth | 2.76E-02 |
| 223 | GO:0009725: response to hormone | 2.76E-02 |
| 224 | GO:0045087: innate immune response | 2.85E-02 |
| 225 | GO:0009266: response to temperature stimulus | 3.01E-02 |
| 226 | GO:0009934: regulation of meristem structural organization | 3.01E-02 |
| 227 | GO:0030001: metal ion transport | 3.25E-02 |
| 228 | GO:0080188: RNA-directed DNA methylation | 3.26E-02 |
| 229 | GO:0090351: seedling development | 3.26E-02 |
| 230 | GO:0010030: positive regulation of seed germination | 3.26E-02 |
| 231 | GO:0019853: L-ascorbic acid biosynthetic process | 3.26E-02 |
| 232 | GO:0006833: water transport | 3.53E-02 |
| 233 | GO:0000162: tryptophan biosynthetic process | 3.53E-02 |
| 234 | GO:0010025: wax biosynthetic process | 3.53E-02 |
| 235 | GO:0009640: photomorphogenesis | 3.67E-02 |
| 236 | GO:0007010: cytoskeleton organization | 3.79E-02 |
| 237 | GO:0010187: negative regulation of seed germination | 3.79E-02 |
| 238 | GO:0007017: microtubule-based process | 4.07E-02 |
| 239 | GO:0051302: regulation of cell division | 4.07E-02 |
| 240 | GO:0008299: isoprenoid biosynthetic process | 4.07E-02 |
| 241 | GO:0007166: cell surface receptor signaling pathway | 4.11E-02 |
| 242 | GO:0006306: DNA methylation | 4.35E-02 |
| 243 | GO:0003333: amino acid transmembrane transport | 4.35E-02 |
| 244 | GO:0048511: rhythmic process | 4.35E-02 |
| 245 | GO:0030245: cellulose catabolic process | 4.64E-02 |
| 246 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 4.64E-02 |
| 247 | GO:0009294: DNA mediated transformation | 4.94E-02 |
| 248 | GO:0009625: response to insect | 4.94E-02 |
| 249 | GO:0006012: galactose metabolic process | 4.94E-02 |
| 250 | GO:0010082: regulation of root meristem growth | 4.94E-02 |