Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G46230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046865: terpenoid transport0.00E+00
2GO:1902009: positive regulation of toxin transport0.00E+00
3GO:0018063: cytochrome c-heme linkage0.00E+00
4GO:0051553: flavone biosynthetic process0.00E+00
5GO:0071985: multivesicular body sorting pathway0.00E+00
6GO:0010055: atrichoblast differentiation0.00E+00
7GO:0006654: phosphatidic acid biosynthetic process0.00E+00
8GO:1902001: fatty acid transmembrane transport0.00E+00
9GO:1902289: negative regulation of defense response to oomycetes0.00E+00
10GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
11GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
12GO:0080149: sucrose induced translational repression0.00E+00
13GO:0006605: protein targeting2.20E-05
14GO:0015031: protein transport3.48E-05
15GO:0042742: defense response to bacterium5.70E-05
16GO:0006623: protein targeting to vacuole7.87E-05
17GO:0051707: response to other organism8.04E-05
18GO:0000162: tryptophan biosynthetic process2.25E-04
19GO:0009759: indole glucosinolate biosynthetic process2.58E-04
20GO:1900057: positive regulation of leaf senescence4.45E-04
21GO:0006680: glucosylceramide catabolic process4.53E-04
22GO:1900384: regulation of flavonol biosynthetic process4.53E-04
23GO:1990542: mitochondrial transmembrane transport4.53E-04
24GO:0032107: regulation of response to nutrient levels4.53E-04
25GO:1990641: response to iron ion starvation4.53E-04
26GO:0010482: regulation of epidermal cell division4.53E-04
27GO:0050691: regulation of defense response to virus by host4.53E-04
28GO:0010230: alternative respiration4.53E-04
29GO:0006102: isocitrate metabolic process5.55E-04
30GO:0016559: peroxisome fission5.55E-04
31GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.55E-04
32GO:0010112: regulation of systemic acquired resistance8.12E-04
33GO:0051252: regulation of RNA metabolic process9.79E-04
34GO:0071668: plant-type cell wall assembly9.79E-04
35GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.79E-04
36GO:0055088: lipid homeostasis9.79E-04
37GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex9.79E-04
38GO:0006101: citrate metabolic process9.79E-04
39GO:0000719: photoreactive repair9.79E-04
40GO:0015908: fatty acid transport9.79E-04
41GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine9.79E-04
42GO:0019725: cellular homeostasis9.79E-04
43GO:0009617: response to bacterium1.12E-03
44GO:0051607: defense response to virus1.25E-03
45GO:0009751: response to salicylic acid1.37E-03
46GO:0009620: response to fungus1.40E-03
47GO:0045037: protein import into chloroplast stroma1.47E-03
48GO:0080163: regulation of protein serine/threonine phosphatase activity1.59E-03
49GO:0044375: regulation of peroxisome size1.59E-03
50GO:0071398: cellular response to fatty acid1.59E-03
51GO:0072661: protein targeting to plasma membrane1.59E-03
52GO:0010186: positive regulation of cellular defense response1.59E-03
53GO:0006065: UDP-glucuronate biosynthetic process1.59E-03
54GO:0010476: gibberellin mediated signaling pathway1.59E-03
55GO:0010325: raffinose family oligosaccharide biosynthetic process1.59E-03
56GO:0015692: lead ion transport1.59E-03
57GO:0052546: cell wall pectin metabolic process1.59E-03
58GO:0080168: abscisic acid transport1.59E-03
59GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.59E-03
60GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.59E-03
61GO:0010102: lateral root morphogenesis1.67E-03
62GO:0002237: response to molecule of bacterial origin1.88E-03
63GO:0090351: seedling development2.11E-03
64GO:0080024: indolebutyric acid metabolic process2.31E-03
65GO:0055070: copper ion homeostasis2.31E-03
66GO:0001676: long-chain fatty acid metabolic process2.31E-03
67GO:0055089: fatty acid homeostasis2.31E-03
68GO:0010116: positive regulation of abscisic acid biosynthetic process2.31E-03
69GO:0070301: cellular response to hydrogen peroxide2.31E-03
70GO:0051639: actin filament network formation2.31E-03
71GO:0002239: response to oomycetes2.31E-03
72GO:0071323: cellular response to chitin2.31E-03
73GO:0006099: tricarboxylic acid cycle2.70E-03
74GO:0016192: vesicle-mediated transport2.84E-03
75GO:0015867: ATP transport3.10E-03
76GO:0060548: negative regulation of cell death3.10E-03
77GO:0009939: positive regulation of gibberellic acid mediated signaling pathway3.10E-03
78GO:0051764: actin crosslink formation3.10E-03
79GO:0048830: adventitious root development3.10E-03
80GO:1902584: positive regulation of response to water deprivation3.10E-03
81GO:1901002: positive regulation of response to salt stress3.10E-03
82GO:0006621: protein retention in ER lumen3.10E-03
83GO:0033356: UDP-L-arabinose metabolic process3.10E-03
84GO:0051567: histone H3-K9 methylation3.10E-03
85GO:0006631: fatty acid metabolic process3.18E-03
86GO:0071456: cellular response to hypoxia3.47E-03
87GO:0006886: intracellular protein transport3.78E-03
88GO:0006097: glyoxylate cycle3.98E-03
89GO:0009229: thiamine diphosphate biosynthetic process3.98E-03
90GO:0045927: positive regulation of growth3.98E-03
91GO:0046283: anthocyanin-containing compound metabolic process3.98E-03
92GO:0009636: response to toxic substance4.10E-03
93GO:0007275: multicellular organism development4.13E-03
94GO:0009228: thiamine biosynthetic process4.92E-03
95GO:0006014: D-ribose metabolic process4.92E-03
96GO:0015866: ADP transport4.92E-03
97GO:0006777: Mo-molybdopterin cofactor biosynthetic process4.92E-03
98GO:0010256: endomembrane system organization4.92E-03
99GO:0009920: cell plate formation involved in plant-type cell wall biogenesis4.92E-03
100GO:1900425: negative regulation of defense response to bacterium4.92E-03
101GO:0048444: floral organ morphogenesis5.94E-03
102GO:0034389: lipid particle organization5.94E-03
103GO:0017148: negative regulation of translation5.94E-03
104GO:0010193: response to ozone6.43E-03
105GO:0002229: defense response to oomycetes6.43E-03
106GO:0050829: defense response to Gram-negative bacterium7.03E-03
107GO:1902074: response to salt7.03E-03
108GO:0010044: response to aluminum ion7.03E-03
109GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.03E-03
110GO:1900056: negative regulation of leaf senescence7.03E-03
111GO:0080186: developmental vegetative growth7.03E-03
112GO:0006614: SRP-dependent cotranslational protein targeting to membrane7.03E-03
113GO:0071669: plant-type cell wall organization or biogenesis7.03E-03
114GO:0000122: negative regulation of transcription from RNA polymerase II promoter7.03E-03
115GO:2000014: regulation of endosperm development7.03E-03
116GO:0006333: chromatin assembly or disassembly7.03E-03
117GO:0045010: actin nucleation8.18E-03
118GO:0031540: regulation of anthocyanin biosynthetic process8.18E-03
119GO:0009850: auxin metabolic process8.18E-03
120GO:0006997: nucleus organization9.38E-03
121GO:0010204: defense response signaling pathway, resistance gene-independent9.38E-03
122GO:0017004: cytochrome complex assembly9.38E-03
123GO:0010208: pollen wall assembly9.38E-03
124GO:0010120: camalexin biosynthetic process9.38E-03
125GO:0009816: defense response to bacterium, incompatible interaction9.87E-03
126GO:0009627: systemic acquired resistance1.04E-02
127GO:0006906: vesicle fusion1.04E-02
128GO:0010200: response to chitin1.06E-02
129GO:0009056: catabolic process1.07E-02
130GO:0000902: cell morphogenesis1.07E-02
131GO:0009835: fruit ripening1.07E-02
132GO:0007338: single fertilization1.07E-02
133GO:0008202: steroid metabolic process1.20E-02
134GO:0090332: stomatal closure1.20E-02
135GO:0009086: methionine biosynthetic process1.20E-02
136GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.20E-02
137GO:0009688: abscisic acid biosynthetic process1.34E-02
138GO:0009641: shade avoidance1.34E-02
139GO:0016441: posttranscriptional gene silencing1.34E-02
140GO:0051555: flavonol biosynthetic process1.34E-02
141GO:0009870: defense response signaling pathway, resistance gene-dependent1.34E-02
142GO:0000103: sulfate assimilation1.34E-02
143GO:0048765: root hair cell differentiation1.48E-02
144GO:0009684: indoleacetic acid biosynthetic process1.48E-02
145GO:0019684: photosynthesis, light reaction1.48E-02
146GO:0009682: induced systemic resistance1.48E-02
147GO:0052544: defense response by callose deposition in cell wall1.48E-02
148GO:0040008: regulation of growth1.54E-02
149GO:0010150: leaf senescence1.63E-02
150GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.63E-02
151GO:0000266: mitochondrial fission1.63E-02
152GO:0030036: actin cytoskeleton organization1.79E-02
153GO:2000012: regulation of auxin polar transport1.79E-02
154GO:0006887: exocytosis1.85E-02
155GO:0007166: cell surface receptor signaling pathway1.93E-02
156GO:0007015: actin filament organization1.95E-02
157GO:0010114: response to red light2.00E-02
158GO:0009753: response to jasmonic acid2.02E-02
159GO:0007033: vacuole organization2.12E-02
160GO:0009225: nucleotide-sugar metabolic process2.12E-02
161GO:0007031: peroxisome organization2.12E-02
162GO:0006636: unsaturated fatty acid biosynthetic process2.29E-02
163GO:0031347: regulation of defense response2.43E-02
164GO:0051017: actin filament bundle assembly2.46E-02
165GO:0006289: nucleotide-excision repair2.46E-02
166GO:0080147: root hair cell development2.46E-02
167GO:0030150: protein import into mitochondrial matrix2.46E-02
168GO:0051302: regulation of cell division2.64E-02
169GO:0006874: cellular calcium ion homeostasis2.64E-02
170GO:0010026: trichome differentiation2.64E-02
171GO:0006334: nucleosome assembly2.82E-02
172GO:0019915: lipid storage2.82E-02
173GO:0009269: response to desiccation2.82E-02
174GO:0006417: regulation of translation2.99E-02
175GO:0007005: mitochondrion organization3.01E-02
176GO:0031348: negative regulation of defense response3.01E-02
177GO:0016226: iron-sulfur cluster assembly3.01E-02
178GO:0030433: ubiquitin-dependent ERAD pathway3.01E-02
179GO:0009734: auxin-activated signaling pathway3.02E-02
180GO:0006970: response to osmotic stress3.10E-02
181GO:0009411: response to UV3.20E-02
182GO:0006012: galactose metabolic process3.20E-02
183GO:0009693: ethylene biosynthetic process3.20E-02
184GO:0042147: retrograde transport, endosome to Golgi3.60E-02
185GO:0010118: stomatal movement3.81E-02
186GO:0006662: glycerol ether metabolic process4.01E-02
187GO:0010182: sugar mediated signaling pathway4.01E-02
188GO:0009960: endosperm development4.01E-02
189GO:0006520: cellular amino acid metabolic process4.01E-02
190GO:0019252: starch biosynthetic process4.44E-02
191GO:0006635: fatty acid beta-oxidation4.66E-02
192GO:0071554: cell wall organization or biogenesis4.66E-02
193GO:0000302: response to reactive oxygen species4.66E-02
194GO:0006891: intra-Golgi vesicle-mediated transport4.66E-02
195GO:0016032: viral process4.88E-02
RankGO TermAdjusted P value
1GO:0005046: KDEL sequence binding0.00E+00
2GO:0034338: short-chain carboxylesterase activity0.00E+00
3GO:0033759: flavone synthase activity0.00E+00
4GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
5GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
6GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity0.00E+00
7GO:0102867: molybdenum cofactor sulfurtransferase activity0.00E+00
8GO:0050334: thiaminase activity0.00E+00
9GO:0004656: procollagen-proline 4-dioxygenase activity3.46E-04
10GO:0102391: decanoate--CoA ligase activity3.46E-04
11GO:0008320: protein transmembrane transporter activity4.45E-04
12GO:0004467: long-chain fatty acid-CoA ligase activity4.45E-04
13GO:0009000: selenocysteine lyase activity4.53E-04
14GO:0015245: fatty acid transporter activity4.53E-04
15GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity4.53E-04
16GO:0016229: steroid dehydrogenase activity4.53E-04
17GO:0004425: indole-3-glycerol-phosphate synthase activity4.53E-04
18GO:0070401: NADP+ binding4.53E-04
19GO:0032266: phosphatidylinositol-3-phosphate binding4.53E-04
20GO:0004348: glucosylceramidase activity4.53E-04
21GO:0047150: betaine-homocysteine S-methyltransferase activity4.53E-04
22GO:0030942: endoplasmic reticulum signal peptide binding4.53E-04
23GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity9.79E-04
24GO:0010331: gibberellin binding9.79E-04
25GO:0003994: aconitate hydratase activity9.79E-04
26GO:0032934: sterol binding9.79E-04
27GO:0008428: ribonuclease inhibitor activity9.79E-04
28GO:0052691: UDP-arabinopyranose mutase activity9.79E-04
29GO:0050736: O-malonyltransferase activity9.79E-04
30GO:0003979: UDP-glucose 6-dehydrogenase activity1.59E-03
31GO:0008265: Mo-molybdopterin cofactor sulfurase activity1.59E-03
32GO:0004324: ferredoxin-NADP+ reductase activity1.59E-03
33GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.59E-03
34GO:0043169: cation binding1.59E-03
35GO:0032403: protein complex binding1.59E-03
36GO:0016656: monodehydroascorbate reductase (NADH) activity2.31E-03
37GO:0008106: alcohol dehydrogenase (NADP+) activity2.31E-03
38GO:0017077: oxidative phosphorylation uncoupler activity2.31E-03
39GO:0035529: NADH pyrophosphatase activity2.31E-03
40GO:0030527: structural constituent of chromatin2.31E-03
41GO:0004449: isocitrate dehydrogenase (NAD+) activity2.31E-03
42GO:0010178: IAA-amino acid conjugate hydrolase activity2.31E-03
43GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.55E-03
44GO:0031418: L-ascorbic acid binding2.61E-03
45GO:0016866: intramolecular transferase activity3.10E-03
46GO:0004834: tryptophan synthase activity3.10E-03
47GO:0046923: ER retention sequence binding3.10E-03
48GO:0050378: UDP-glucuronate 4-epimerase activity3.10E-03
49GO:0047631: ADP-ribose diphosphatase activity3.98E-03
50GO:0030151: molybdenum ion binding3.98E-03
51GO:0045300: acyl-[acyl-carrier-protein] desaturase activity3.98E-03
52GO:0008948: oxaloacetate decarboxylase activity3.98E-03
53GO:0004623: phospholipase A2 activity3.98E-03
54GO:0000210: NAD+ diphosphatase activity4.92E-03
55GO:0050662: coenzyme binding5.60E-03
56GO:0003978: UDP-glucose 4-epimerase activity5.94E-03
57GO:0015217: ADP transmembrane transporter activity5.94E-03
58GO:0004747: ribokinase activity5.94E-03
59GO:0005347: ATP transmembrane transporter activity5.94E-03
60GO:0004869: cysteine-type endopeptidase inhibitor activity8.18E-03
61GO:0008865: fructokinase activity8.18E-03
62GO:0008312: 7S RNA binding8.18E-03
63GO:0047893: flavonol 3-O-glucosyltransferase activity8.18E-03
64GO:0052747: sinapyl alcohol dehydrogenase activity8.18E-03
65GO:0005544: calcium-dependent phospholipid binding8.18E-03
66GO:0004033: aldo-keto reductase (NADP) activity8.18E-03
67GO:0008483: transaminase activity8.30E-03
68GO:0008142: oxysterol binding9.38E-03
69GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.07E-02
70GO:0004806: triglyceride lipase activity1.10E-02
71GO:0030170: pyridoxal phosphate binding1.24E-02
72GO:0030234: enzyme regulator activity1.34E-02
73GO:0004864: protein phosphatase inhibitor activity1.34E-02
74GO:0042803: protein homodimerization activity1.42E-02
75GO:0045551: cinnamyl-alcohol dehydrogenase activity1.63E-02
76GO:0000149: SNARE binding1.70E-02
77GO:0051539: 4 iron, 4 sulfur cluster binding1.77E-02
78GO:0004022: alcohol dehydrogenase (NAD) activity1.79E-02
79GO:0005484: SNAP receptor activity2.00E-02
80GO:0005217: intracellular ligand-gated ion channel activity2.12E-02
81GO:0008061: chitin binding2.12E-02
82GO:0003712: transcription cofactor activity2.12E-02
83GO:0004970: ionotropic glutamate receptor activity2.12E-02
84GO:0005198: structural molecule activity2.25E-02
85GO:0051287: NAD binding2.43E-02
86GO:0051536: iron-sulfur cluster binding2.46E-02
87GO:0043130: ubiquitin binding2.46E-02
88GO:0001046: core promoter sequence-specific DNA binding2.46E-02
89GO:0015079: potassium ion transmembrane transporter activity2.64E-02
90GO:0035251: UDP-glucosyltransferase activity2.82E-02
91GO:0003682: chromatin binding3.03E-02
92GO:0016760: cellulose synthase (UDP-forming) activity3.20E-02
93GO:0004499: N,N-dimethylaniline monooxygenase activity3.40E-02
94GO:0016887: ATPase activity3.47E-02
95GO:0080043: quercetin 3-O-glucosyltransferase activity3.51E-02
96GO:0080044: quercetin 7-O-glucosyltransferase activity3.51E-02
97GO:0047134: protein-disulfide reductase activity3.60E-02
98GO:0005102: receptor binding3.60E-02
99GO:0015035: protein disulfide oxidoreductase activity3.96E-02
100GO:0016746: transferase activity, transferring acyl groups3.96E-02
101GO:0005509: calcium ion binding4.01E-02
102GO:0004791: thioredoxin-disulfide reductase activity4.23E-02
103GO:0004872: receptor activity4.44E-02
104GO:0005515: protein binding4.45E-02
105GO:0016758: transferase activity, transferring hexosyl groups4.67E-02
106GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.92E-02
RankGO TermAdjusted P value
1GO:0005794: Golgi apparatus9.70E-08
2GO:0016021: integral component of membrane9.00E-06
3GO:0005789: endoplasmic reticulum membrane1.78E-05
4GO:0017119: Golgi transport complex7.22E-05
5GO:0005801: cis-Golgi network3.46E-04
6GO:0005829: cytosol3.50E-04
7GO:0000138: Golgi trans cisterna4.53E-04
8GO:0045252: oxoglutarate dehydrogenase complex4.53E-04
9GO:0005779: integral component of peroxisomal membrane6.77E-04
10GO:0030665: clathrin-coated vesicle membrane9.56E-04
11GO:0000814: ESCRT II complex9.79E-04
12GO:0030134: ER to Golgi transport vesicle9.79E-04
13GO:0005802: trans-Golgi network1.22E-03
14GO:0042406: extrinsic component of endoplasmic reticulum membrane1.59E-03
15GO:0005768: endosome1.66E-03
16GO:0032432: actin filament bundle2.31E-03
17GO:0005783: endoplasmic reticulum2.31E-03
18GO:0030658: transport vesicle membrane2.31E-03
19GO:0031902: late endosome membrane3.18E-03
20GO:0000813: ESCRT I complex3.98E-03
21GO:0000164: protein phosphatase type 1 complex3.98E-03
22GO:0005743: mitochondrial inner membrane4.55E-03
23GO:0005885: Arp2/3 protein complex5.94E-03
24GO:0009504: cell plate6.00E-03
25GO:0031965: nuclear membrane6.00E-03
26GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane7.03E-03
27GO:0032580: Golgi cisterna membrane7.80E-03
28GO:0005778: peroxisomal membrane8.30E-03
29GO:0005886: plasma membrane9.18E-03
30GO:0005811: lipid particle9.38E-03
31GO:0005786: signal recognition particle, endoplasmic reticulum targeting9.38E-03
32GO:0031901: early endosome membrane1.07E-02
33GO:0005623: cell1.12E-02
34GO:0008540: proteasome regulatory particle, base subcomplex1.20E-02
35GO:0005884: actin filament1.48E-02
36GO:0005774: vacuolar membrane1.69E-02
37GO:0031201: SNARE complex1.85E-02
38GO:0005795: Golgi stack2.12E-02
39GO:0005769: early endosome2.29E-02
40GO:0005741: mitochondrial outer membrane2.82E-02
41GO:0031225: anchored component of membrane2.98E-02
42GO:0005744: mitochondrial inner membrane presequence translocase complex3.40E-02
43GO:0009506: plasmodesma3.52E-02
44GO:0009706: chloroplast inner membrane3.84E-02
45GO:0005770: late endosome4.01E-02
46GO:0019898: extrinsic component of membrane4.44E-02
47GO:0009543: chloroplast thylakoid lumen4.80E-02
48GO:0000785: chromatin4.88E-02
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Gene type



Gene DE type