GO Enrichment Analysis of Co-expressed Genes with
AT5G45680
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
2 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
3 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
4 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
5 | GO:0015979: photosynthesis | 1.45E-09 |
6 | GO:0015995: chlorophyll biosynthetic process | 4.18E-09 |
7 | GO:0009773: photosynthetic electron transport in photosystem I | 8.52E-09 |
8 | GO:0032544: plastid translation | 1.33E-07 |
9 | GO:0055114: oxidation-reduction process | 1.25E-06 |
10 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 3.96E-06 |
11 | GO:0010196: nonphotochemical quenching | 4.97E-06 |
12 | GO:0042254: ribosome biogenesis | 1.23E-05 |
13 | GO:0006000: fructose metabolic process | 1.41E-05 |
14 | GO:0090391: granum assembly | 1.41E-05 |
15 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 3.17E-05 |
16 | GO:0009735: response to cytokinin | 4.71E-05 |
17 | GO:0015994: chlorophyll metabolic process | 5.68E-05 |
18 | GO:0010207: photosystem II assembly | 6.35E-05 |
19 | GO:1901259: chloroplast rRNA processing | 1.78E-04 |
20 | GO:0006412: translation | 2.07E-04 |
21 | GO:0010028: xanthophyll cycle | 2.94E-04 |
22 | GO:0034337: RNA folding | 2.94E-04 |
23 | GO:0005980: glycogen catabolic process | 2.94E-04 |
24 | GO:0009642: response to light intensity | 2.94E-04 |
25 | GO:0000476: maturation of 4.5S rRNA | 2.94E-04 |
26 | GO:0000967: rRNA 5'-end processing | 2.94E-04 |
27 | GO:0006002: fructose 6-phosphate metabolic process | 3.62E-04 |
28 | GO:0009657: plastid organization | 3.62E-04 |
29 | GO:0010206: photosystem II repair | 4.36E-04 |
30 | GO:0010027: thylakoid membrane organization | 6.04E-04 |
31 | GO:0010353: response to trehalose | 6.45E-04 |
32 | GO:0016122: xanthophyll metabolic process | 6.45E-04 |
33 | GO:0006729: tetrahydrobiopterin biosynthetic process | 6.45E-04 |
34 | GO:0010270: photosystem II oxygen evolving complex assembly | 6.45E-04 |
35 | GO:0034470: ncRNA processing | 6.45E-04 |
36 | GO:0006898: receptor-mediated endocytosis | 6.45E-04 |
37 | GO:0043085: positive regulation of catalytic activity | 6.94E-04 |
38 | GO:0005983: starch catabolic process | 7.93E-04 |
39 | GO:0006094: gluconeogenesis | 8.98E-04 |
40 | GO:0005986: sucrose biosynthetic process | 8.98E-04 |
41 | GO:0006518: peptide metabolic process | 1.04E-03 |
42 | GO:0034599: cellular response to oxidative stress | 1.20E-03 |
43 | GO:0006633: fatty acid biosynthetic process | 1.21E-03 |
44 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.25E-03 |
45 | GO:1902358: sulfate transmembrane transport | 1.50E-03 |
46 | GO:0006020: inositol metabolic process | 1.50E-03 |
47 | GO:0071484: cellular response to light intensity | 1.50E-03 |
48 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.50E-03 |
49 | GO:0010731: protein glutathionylation | 1.50E-03 |
50 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.53E-03 |
51 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.01E-03 |
52 | GO:0006109: regulation of carbohydrate metabolic process | 2.01E-03 |
53 | GO:0045727: positive regulation of translation | 2.01E-03 |
54 | GO:0006021: inositol biosynthetic process | 2.01E-03 |
55 | GO:0071483: cellular response to blue light | 2.01E-03 |
56 | GO:0006364: rRNA processing | 2.27E-03 |
57 | GO:0006461: protein complex assembly | 2.56E-03 |
58 | GO:0006656: phosphatidylcholine biosynthetic process | 2.56E-03 |
59 | GO:0009904: chloroplast accumulation movement | 2.56E-03 |
60 | GO:0009658: chloroplast organization | 2.71E-03 |
61 | GO:0006662: glycerol ether metabolic process | 2.74E-03 |
62 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 3.16E-03 |
63 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 3.16E-03 |
64 | GO:0006828: manganese ion transport | 3.16E-03 |
65 | GO:1902456: regulation of stomatal opening | 3.16E-03 |
66 | GO:0046855: inositol phosphate dephosphorylation | 3.16E-03 |
67 | GO:0010190: cytochrome b6f complex assembly | 3.16E-03 |
68 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 3.16E-03 |
69 | GO:0006810: transport | 3.48E-03 |
70 | GO:0009854: oxidative photosynthetic carbon pathway | 3.81E-03 |
71 | GO:0009955: adaxial/abaxial pattern specification | 3.81E-03 |
72 | GO:0042026: protein refolding | 3.81E-03 |
73 | GO:0009903: chloroplast avoidance movement | 3.81E-03 |
74 | GO:0009610: response to symbiotic fungus | 4.49E-03 |
75 | GO:0009772: photosynthetic electron transport in photosystem II | 4.49E-03 |
76 | GO:0008272: sulfate transport | 4.49E-03 |
77 | GO:0045454: cell redox homeostasis | 4.95E-03 |
78 | GO:0030091: protein repair | 5.21E-03 |
79 | GO:0006353: DNA-templated transcription, termination | 5.21E-03 |
80 | GO:0015996: chlorophyll catabolic process | 5.98E-03 |
81 | GO:0016311: dephosphorylation | 6.06E-03 |
82 | GO:0032259: methylation | 6.38E-03 |
83 | GO:0006783: heme biosynthetic process | 6.77E-03 |
84 | GO:0006754: ATP biosynthetic process | 6.77E-03 |
85 | GO:0009631: cold acclimation | 7.37E-03 |
86 | GO:0005982: starch metabolic process | 7.60E-03 |
87 | GO:0010205: photoinhibition | 7.60E-03 |
88 | GO:0009853: photorespiration | 8.08E-03 |
89 | GO:0009641: shade avoidance | 8.48E-03 |
90 | GO:0006782: protoporphyrinogen IX biosynthetic process | 8.48E-03 |
91 | GO:0009409: response to cold | 8.87E-03 |
92 | GO:0006816: calcium ion transport | 9.38E-03 |
93 | GO:0009089: lysine biosynthetic process via diaminopimelate | 9.38E-03 |
94 | GO:0006415: translational termination | 9.38E-03 |
95 | GO:0000272: polysaccharide catabolic process | 9.38E-03 |
96 | GO:0009750: response to fructose | 9.38E-03 |
97 | GO:0018119: peptidyl-cysteine S-nitrosylation | 9.38E-03 |
98 | GO:0006790: sulfur compound metabolic process | 1.03E-02 |
99 | GO:0010114: response to red light | 1.04E-02 |
100 | GO:0018107: peptidyl-threonine phosphorylation | 1.13E-02 |
101 | GO:0010223: secondary shoot formation | 1.23E-02 |
102 | GO:0009266: response to temperature stimulus | 1.23E-02 |
103 | GO:0019253: reductive pentose-phosphate cycle | 1.23E-02 |
104 | GO:0007015: actin filament organization | 1.23E-02 |
105 | GO:0046854: phosphatidylinositol phosphorylation | 1.33E-02 |
106 | GO:0005985: sucrose metabolic process | 1.33E-02 |
107 | GO:0071732: cellular response to nitric oxide | 1.33E-02 |
108 | GO:0000027: ribosomal large subunit assembly | 1.55E-02 |
109 | GO:0051017: actin filament bundle assembly | 1.55E-02 |
110 | GO:0006418: tRNA aminoacylation for protein translation | 1.66E-02 |
111 | GO:0016114: terpenoid biosynthetic process | 1.78E-02 |
112 | GO:0007005: mitochondrion organization | 1.90E-02 |
113 | GO:0016226: iron-sulfur cluster assembly | 1.90E-02 |
114 | GO:0035428: hexose transmembrane transport | 1.90E-02 |
115 | GO:0071369: cellular response to ethylene stimulus | 2.02E-02 |
116 | GO:0006396: RNA processing | 2.07E-02 |
117 | GO:0016117: carotenoid biosynthetic process | 2.27E-02 |
118 | GO:0070417: cellular response to cold | 2.27E-02 |
119 | GO:0042631: cellular response to water deprivation | 2.40E-02 |
120 | GO:0046323: glucose import | 2.53E-02 |
121 | GO:0009741: response to brassinosteroid | 2.53E-02 |
122 | GO:0015986: ATP synthesis coupled proton transport | 2.66E-02 |
123 | GO:0006629: lipid metabolic process | 2.68E-02 |
124 | GO:0019252: starch biosynthetic process | 2.80E-02 |
125 | GO:0000302: response to reactive oxygen species | 2.94E-02 |
126 | GO:0008152: metabolic process | 3.02E-02 |
127 | GO:0071281: cellular response to iron ion | 3.22E-02 |
128 | GO:0046686: response to cadmium ion | 3.26E-02 |
129 | GO:0009627: systemic acquired resistance | 4.13E-02 |
130 | GO:0008219: cell death | 4.61E-02 |
131 | GO:0009817: defense response to fungus, incompatible interaction | 4.61E-02 |
132 | GO:0048481: plant ovule development | 4.61E-02 |
133 | GO:0018298: protein-chromophore linkage | 4.61E-02 |
134 | GO:0006979: response to oxidative stress | 4.62E-02 |
135 | GO:0009813: flavonoid biosynthetic process | 4.77E-02 |
136 | GO:0010218: response to far red light | 4.94E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
2 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
3 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
4 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
5 | GO:0090711: FMN hydrolase activity | 0.00E+00 |
6 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
7 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
8 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
9 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
10 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
11 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
12 | GO:0008887: glycerate kinase activity | 0.00E+00 |
13 | GO:0019843: rRNA binding | 3.33E-12 |
14 | GO:0003735: structural constituent of ribosome | 2.43E-06 |
15 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 3.96E-06 |
16 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.68E-05 |
17 | GO:0005528: FK506 binding | 1.05E-04 |
18 | GO:0016491: oxidoreductase activity | 2.58E-04 |
19 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.79E-04 |
20 | GO:0045486: naringenin 3-dioxygenase activity | 2.94E-04 |
21 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 2.94E-04 |
22 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 2.94E-04 |
23 | GO:0050521: alpha-glucan, water dikinase activity | 2.94E-04 |
24 | GO:0008184: glycogen phosphorylase activity | 2.94E-04 |
25 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 2.94E-04 |
26 | GO:0004853: uroporphyrinogen decarboxylase activity | 2.94E-04 |
27 | GO:0045485: omega-6 fatty acid desaturase activity | 2.94E-04 |
28 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 2.94E-04 |
29 | GO:0004645: phosphorylase activity | 2.94E-04 |
30 | GO:0034256: chlorophyll(ide) b reductase activity | 2.94E-04 |
31 | GO:0048038: quinone binding | 3.75E-04 |
32 | GO:0008047: enzyme activator activity | 6.02E-04 |
33 | GO:0047746: chlorophyllase activity | 6.45E-04 |
34 | GO:0042389: omega-3 fatty acid desaturase activity | 6.45E-04 |
35 | GO:0010297: heteropolysaccharide binding | 6.45E-04 |
36 | GO:0052832: inositol monophosphate 3-phosphatase activity | 6.45E-04 |
37 | GO:0033201: alpha-1,4-glucan synthase activity | 6.45E-04 |
38 | GO:0008934: inositol monophosphate 1-phosphatase activity | 6.45E-04 |
39 | GO:0052833: inositol monophosphate 4-phosphatase activity | 6.45E-04 |
40 | GO:0018708: thiol S-methyltransferase activity | 6.45E-04 |
41 | GO:0016630: protochlorophyllide reductase activity | 6.45E-04 |
42 | GO:0008967: phosphoglycolate phosphatase activity | 6.45E-04 |
43 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 6.45E-04 |
44 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 6.45E-04 |
45 | GO:0070402: NADPH binding | 1.04E-03 |
46 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 1.04E-03 |
47 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 1.04E-03 |
48 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 1.04E-03 |
49 | GO:0004373: glycogen (starch) synthase activity | 1.04E-03 |
50 | GO:0002161: aminoacyl-tRNA editing activity | 1.04E-03 |
51 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 1.04E-03 |
52 | GO:0031409: pigment binding | 1.25E-03 |
53 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.50E-03 |
54 | GO:0019201: nucleotide kinase activity | 1.50E-03 |
55 | GO:0016851: magnesium chelatase activity | 1.50E-03 |
56 | GO:0016149: translation release factor activity, codon specific | 1.50E-03 |
57 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 2.01E-03 |
58 | GO:0009011: starch synthase activity | 2.01E-03 |
59 | GO:0047134: protein-disulfide reductase activity | 2.35E-03 |
60 | GO:0003959: NADPH dehydrogenase activity | 2.56E-03 |
61 | GO:0004791: thioredoxin-disulfide reductase activity | 2.94E-03 |
62 | GO:0008200: ion channel inhibitor activity | 3.16E-03 |
63 | GO:0004130: cytochrome-c peroxidase activity | 3.16E-03 |
64 | GO:0051920: peroxiredoxin activity | 3.81E-03 |
65 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 3.81E-03 |
66 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.81E-03 |
67 | GO:0004017: adenylate kinase activity | 3.81E-03 |
68 | GO:0004602: glutathione peroxidase activity | 3.81E-03 |
69 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.85E-03 |
70 | GO:0016168: chlorophyll binding | 5.16E-03 |
71 | GO:0016209: antioxidant activity | 5.21E-03 |
72 | GO:0004033: aldo-keto reductase (NADP) activity | 5.21E-03 |
73 | GO:0004525: ribonuclease III activity | 5.21E-03 |
74 | GO:0008271: secondary active sulfate transmembrane transporter activity | 5.98E-03 |
75 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 5.98E-03 |
76 | GO:0003747: translation release factor activity | 6.77E-03 |
77 | GO:0004222: metalloendopeptidase activity | 7.03E-03 |
78 | GO:0047617: acyl-CoA hydrolase activity | 7.60E-03 |
79 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 7.60E-03 |
80 | GO:0005384: manganese ion transmembrane transporter activity | 7.60E-03 |
81 | GO:0016787: hydrolase activity | 7.87E-03 |
82 | GO:0003993: acid phosphatase activity | 8.45E-03 |
83 | GO:0030234: enzyme regulator activity | 8.48E-03 |
84 | GO:0044183: protein binding involved in protein folding | 9.38E-03 |
85 | GO:0047372: acylglycerol lipase activity | 9.38E-03 |
86 | GO:0015116: sulfate transmembrane transporter activity | 1.03E-02 |
87 | GO:0000049: tRNA binding | 1.03E-02 |
88 | GO:0015095: magnesium ion transmembrane transporter activity | 1.13E-02 |
89 | GO:0031072: heat shock protein binding | 1.13E-02 |
90 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.13E-02 |
91 | GO:0043621: protein self-association | 1.13E-02 |
92 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.13E-02 |
93 | GO:0008168: methyltransferase activity | 1.19E-02 |
94 | GO:0008266: poly(U) RNA binding | 1.23E-02 |
95 | GO:0051536: iron-sulfur cluster binding | 1.55E-02 |
96 | GO:0031418: L-ascorbic acid binding | 1.55E-02 |
97 | GO:0004857: enzyme inhibitor activity | 1.55E-02 |
98 | GO:0051082: unfolded protein binding | 2.01E-02 |
99 | GO:0015035: protein disulfide oxidoreductase activity | 2.07E-02 |
100 | GO:0003727: single-stranded RNA binding | 2.14E-02 |
101 | GO:0004812: aminoacyl-tRNA ligase activity | 2.27E-02 |
102 | GO:0003723: RNA binding | 2.47E-02 |
103 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 2.53E-02 |
104 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.59E-02 |
105 | GO:0005355: glucose transmembrane transporter activity | 2.66E-02 |
106 | GO:0050662: coenzyme binding | 2.66E-02 |
107 | GO:0051015: actin filament binding | 3.22E-02 |
108 | GO:0008237: metallopeptidase activity | 3.51E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0009571: proplastid stroma | 0.00E+00 |
2 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
3 | GO:0009575: chromoplast stroma | 0.00E+00 |
4 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
5 | GO:0009507: chloroplast | 8.41E-74 |
6 | GO:0009535: chloroplast thylakoid membrane | 4.03E-52 |
7 | GO:0009941: chloroplast envelope | 2.55E-40 |
8 | GO:0009534: chloroplast thylakoid | 2.62E-39 |
9 | GO:0009570: chloroplast stroma | 1.81E-33 |
10 | GO:0009579: thylakoid | 2.26E-24 |
11 | GO:0009543: chloroplast thylakoid lumen | 3.22E-15 |
12 | GO:0031977: thylakoid lumen | 6.04E-13 |
13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.21E-11 |
14 | GO:0031969: chloroplast membrane | 1.19E-08 |
15 | GO:0005840: ribosome | 6.87E-08 |
16 | GO:0010319: stromule | 4.35E-05 |
17 | GO:0030095: chloroplast photosystem II | 6.35E-05 |
18 | GO:0042651: thylakoid membrane | 1.22E-04 |
19 | GO:0009547: plastid ribosome | 2.94E-04 |
20 | GO:0009706: chloroplast inner membrane | 6.11E-04 |
21 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 6.45E-04 |
22 | GO:0031357: integral component of chloroplast inner membrane | 6.45E-04 |
23 | GO:0010287: plastoglobule | 7.93E-04 |
24 | GO:0010007: magnesium chelatase complex | 1.04E-03 |
25 | GO:0030076: light-harvesting complex | 1.13E-03 |
26 | GO:0005960: glycine cleavage complex | 1.50E-03 |
27 | GO:0009654: photosystem II oxygen evolving complex | 1.53E-03 |
28 | GO:0015935: small ribosomal subunit | 1.68E-03 |
29 | GO:0009544: chloroplast ATP synthase complex | 2.01E-03 |
30 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 3.16E-03 |
31 | GO:0019898: extrinsic component of membrane | 3.16E-03 |
32 | GO:0009840: chloroplastic endopeptidase Clp complex | 3.81E-03 |
33 | GO:0009533: chloroplast stromal thylakoid | 4.49E-03 |
34 | GO:0009501: amyloplast | 5.21E-03 |
35 | GO:0031982: vesicle | 5.21E-03 |
36 | GO:0005763: mitochondrial small ribosomal subunit | 6.77E-03 |
37 | GO:0000311: plastid large ribosomal subunit | 1.03E-02 |
38 | GO:0032040: small-subunit processome | 1.03E-02 |
39 | GO:0022626: cytosolic ribosome | 1.52E-02 |
40 | GO:0009532: plastid stroma | 1.78E-02 |
41 | GO:0015629: actin cytoskeleton | 2.02E-02 |
42 | GO:0005623: cell | 2.59E-02 |
43 | GO:0009522: photosystem I | 2.66E-02 |
44 | GO:0009523: photosystem II | 2.80E-02 |
45 | GO:0009707: chloroplast outer membrane | 4.61E-02 |