co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G45510

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006903: vesicle targeting	0.00E+00
2	GO:0036258: multivesicular body assembly	0.00E+00
3	GO:0046680: response to DDT	0.00E+00
4	GO:0002191: cap-dependent translational initiation	0.00E+00
5	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
6	GO:0009173: pyrimidine ribonucleoside monophosphate metabolic process	0.00E+00
7	GO:0006511: ubiquitin-dependent protein catabolic process	2.30E-10
8	GO:0030163: protein catabolic process	1.61E-06
9	GO:0042176: regulation of protein catabolic process	2.42E-05
10	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.42E-05
11	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.04E-04
12	GO:0000032: cell wall mannoprotein biosynthetic process	1.04E-04
13	GO:0006888: ER to Golgi vesicle-mediated transport	1.06E-04
14	GO:0010043: response to zinc ion	1.52E-04
15	GO:0009805: coumarin biosynthetic process	2.44E-04
16	GO:0031124: mRNA 3'-end processing	2.44E-04
17	GO:2000072: regulation of defense response to fungus, incompatible interaction	2.44E-04
18	GO:0051603: proteolysis involved in cellular protein catabolic process	3.81E-04
19	GO:0033591: response to L-ascorbic acid	4.05E-04
20	GO:0010498: proteasomal protein catabolic process	4.05E-04
21	GO:0030433: ubiquitin-dependent ERAD pathway	4.52E-04
22	GO:0042147: retrograde transport, endosome to Golgi	5.78E-04
23	GO:0009298: GDP-mannose biosynthetic process	5.82E-04
24	GO:0002679: respiratory burst involved in defense response	5.82E-04
25	GO:0006612: protein targeting to membrane	5.82E-04
26	GO:0006893: Golgi to plasma membrane transport	5.82E-04
27	GO:0010255: glucose mediated signaling pathway	5.82E-04
28	GO:0071786: endoplasmic reticulum tubular network organization	5.82E-04
29	GO:0070676: intralumenal vesicle formation	5.82E-04
30	GO:0006515: misfolded or incompletely synthesized protein catabolic process	5.82E-04
31	GO:0010363: regulation of plant-type hypersensitive response	7.73E-04
32	GO:0006221: pyrimidine nucleotide biosynthetic process	7.73E-04
33	GO:0033356: UDP-L-arabinose metabolic process	7.73E-04
34	GO:0010222: stem vascular tissue pattern formation	7.73E-04
35	GO:0006564: L-serine biosynthetic process	9.77E-04
36	GO:0005513: detection of calcium ion	9.77E-04
37	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.19E-03
38	GO:0006555: methionine metabolic process	1.19E-03
39	GO:0001731: formation of translation preinitiation complex	1.19E-03
40	GO:0048827: phyllome development	1.19E-03
41	GO:0019509: L-methionine salvage from methylthioadenosine	1.43E-03
42	GO:0009612: response to mechanical stimulus	1.43E-03
43	GO:0048280: vesicle fusion with Golgi apparatus	1.43E-03
44	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	1.67E-03
45	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.93E-03
46	GO:0006491: N-glycan processing	1.93E-03
47	GO:0048766: root hair initiation	1.93E-03
48	GO:0050821: protein stabilization	1.93E-03
49	GO:0009699: phenylpropanoid biosynthetic process	2.21E-03
50	GO:0009932: cell tip growth	2.21E-03
51	GO:0060321: acceptance of pollen	2.21E-03
52	GO:0046685: response to arsenic-containing substance	2.49E-03
53	GO:0006379: mRNA cleavage	2.49E-03
54	GO:0043067: regulation of programmed cell death	2.79E-03
55	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.79E-03
56	GO:0009651: response to salt stress	2.88E-03
57	GO:0009846: pollen germination	3.05E-03
58	GO:0006896: Golgi to vacuole transport	3.10E-03
59	GO:0045454: cell redox homeostasis	3.20E-03
60	GO:0006486: protein glycosylation	3.27E-03
61	GO:0046856: phosphatidylinositol dephosphorylation	3.42E-03
62	GO:0072593: reactive oxygen species metabolic process	3.42E-03
63	GO:0043085: positive regulation of catalytic activity	3.42E-03
64	GO:0048765: root hair cell differentiation	3.42E-03
65	GO:0006378: mRNA polyadenylation	3.42E-03
66	GO:0006790: sulfur compound metabolic process	3.75E-03
67	GO:0006446: regulation of translational initiation	4.44E-03
68	GO:0009553: embryo sac development	4.50E-03
69	GO:0010053: root epidermal cell differentiation	4.80E-03
70	GO:0007031: peroxisome organization	4.80E-03
71	GO:0019853: L-ascorbic acid biosynthetic process	4.80E-03
72	GO:0046854: phosphatidylinositol phosphorylation	4.80E-03
73	GO:0034976: response to endoplasmic reticulum stress	5.18E-03
74	GO:0000027: ribosomal large subunit assembly	5.56E-03
75	GO:0010187: negative regulation of seed germination	5.56E-03
76	GO:0010431: seed maturation	6.35E-03
77	GO:0019748: secondary metabolic process	6.76E-03
78	GO:0007005: mitochondrion organization	6.76E-03
79	GO:0080092: regulation of pollen tube growth	6.76E-03
80	GO:0015031: protein transport	7.34E-03
81	GO:0009561: megagametogenesis	7.61E-03
82	GO:0034220: ion transmembrane transport	8.49E-03
83	GO:0009555: pollen development	8.64E-03
84	GO:0010154: fruit development	8.95E-03
85	GO:0006662: glycerol ether metabolic process	8.95E-03
86	GO:0009646: response to absence of light	9.42E-03
87	GO:0006623: protein targeting to vacuole	9.90E-03
88	GO:0010183: pollen tube guidance	9.90E-03
89	GO:0055072: iron ion homeostasis	9.90E-03
90	GO:0046686: response to cadmium ion	9.98E-03
91	GO:0006891: intra-Golgi vesicle-mediated transport	1.04E-02
92	GO:0009630: gravitropism	1.09E-02
93	GO:0006904: vesicle docking involved in exocytosis	1.24E-02
94	GO:0009860: pollen tube growth	1.34E-02
95	GO:0009816: defense response to bacterium, incompatible interaction	1.40E-02
96	GO:0009817: defense response to fungus, incompatible interaction	1.62E-02
97	GO:0030244: cellulose biosynthetic process	1.62E-02
98	GO:0009832: plant-type cell wall biogenesis	1.68E-02
99	GO:0006499: N-terminal protein myristoylation	1.74E-02
100	GO:0007568: aging	1.80E-02
101	GO:0055114: oxidation-reduction process	1.81E-02
102	GO:0006886: intracellular protein transport	1.90E-02
103	GO:0009867: jasmonic acid mediated signaling pathway	1.92E-02
104	GO:0045087: innate immune response	1.92E-02
105	GO:0034599: cellular response to oxidative stress	1.98E-02
106	GO:0006887: exocytosis	2.17E-02
107	GO:0009744: response to sucrose	2.30E-02
108	GO:0048316: seed development	3.28E-02
109	GO:0009626: plant-type hypersensitive response	3.35E-02
110	GO:0006810: transport	3.41E-02
111	GO:0009790: embryo development	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0070577: lysine-acetylated histone binding	0.00E+00
2	GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group	0.00E+00
3	GO:0098808: mRNA cap binding	0.00E+00
4	GO:0016504: peptidase activator activity	0.00E+00
5	GO:0004298: threonine-type endopeptidase activity	2.40E-09
6	GO:0036402: proteasome-activating ATPase activity	2.42E-05
7	GO:0008233: peptidase activity	4.50E-05
8	GO:0004476: mannose-6-phosphate isomerase activity	1.04E-04
9	GO:0030234: enzyme regulator activity	1.37E-04
10	GO:0010297: heteropolysaccharide binding	2.44E-04
11	GO:0051879: Hsp90 protein binding	2.44E-04
12	GO:0004617: phosphoglycerate dehydrogenase activity	2.44E-04
13	GO:0004127: cytidylate kinase activity	2.44E-04
14	GO:0008805: carbon-monoxide oxygenase activity	2.44E-04
15	GO:0070361: mitochondrial light strand promoter anti-sense binding	2.44E-04
16	GO:0051731: polynucleotide 5'-hydroxyl-kinase activity	2.44E-04
17	GO:0016887: ATPase activity	2.61E-04
18	GO:0017025: TBP-class protein binding	2.74E-04
19	GO:0004190: aspartic-type endopeptidase activity	2.74E-04
20	GO:0043130: ubiquitin binding	3.40E-04
21	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	4.05E-04
22	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	4.05E-04
23	GO:0047134: protein-disulfide reductase activity	5.78E-04
24	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	5.82E-04
25	GO:0009041: uridylate kinase activity	5.82E-04
26	GO:0004791: thioredoxin-disulfide reductase activity	7.18E-04
27	GO:0070628: proteasome binding	7.73E-04
28	GO:0031593: polyubiquitin binding	1.19E-03
29	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.43E-03
30	GO:0004656: procollagen-proline 4-dioxygenase activity	1.43E-03
31	GO:0004559: alpha-mannosidase activity	1.43E-03
32	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.90E-03
33	GO:0003746: translation elongation factor activity	1.90E-03
34	GO:0008047: enzyme activator activity	3.10E-03
35	GO:0031625: ubiquitin protein ligase binding	3.62E-03
36	GO:0031418: L-ascorbic acid binding	5.56E-03
37	GO:0043424: protein histidine kinase binding	5.95E-03
38	GO:0004176: ATP-dependent peptidase activity	6.35E-03
39	GO:0003756: protein disulfide isomerase activity	7.61E-03
40	GO:0004872: receptor activity	9.90E-03
41	GO:0004518: nuclease activity	1.09E-02
42	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.14E-02
43	GO:0008237: metallopeptidase activity	1.24E-02
44	GO:0005524: ATP binding	1.29E-02
45	GO:0016597: amino acid binding	1.29E-02
46	GO:0015250: water channel activity	1.35E-02
47	GO:0051213: dioxygenase activity	1.35E-02
48	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.51E-02
49	GO:0008236: serine-type peptidase activity	1.57E-02
50	GO:0061630: ubiquitin protein ligase activity	1.62E-02
51	GO:0000149: SNARE binding	2.04E-02
52	GO:0005484: SNAP receptor activity	2.30E-02
53	GO:0035091: phosphatidylinositol binding	2.43E-02
54	GO:0051287: NAD binding	2.64E-02
55	GO:0022857: transmembrane transporter activity	3.50E-02
56	GO:0015035: protein disulfide oxidoreductase activity	3.73E-02
57	GO:0000166: nucleotide binding	4.03E-02
58	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.37E-02
59	GO:0004252: serine-type endopeptidase activity	4.62E-02
60	GO:0008565: protein transporter activity	4.87E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0000502: proteasome complex	3.13E-17
3	GO:0005839: proteasome core complex	1.95E-11
4	GO:0005829: cytosol	6.11E-07
5	GO:0008541: proteasome regulatory particle, lid subcomplex	2.94E-06
6	GO:0031597: cytosolic proteasome complex	3.43E-05
7	GO:0031595: nuclear proteasome complex	4.66E-05
8	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	6.06E-05
9	GO:0019773: proteasome core complex, alpha-subunit complex	7.69E-05
10	GO:0009510: plasmodesmatal desmotubule	1.04E-04
11	GO:0005783: endoplasmic reticulum	1.12E-04
12	GO:0008540: proteasome regulatory particle, base subcomplex	1.15E-04
13	GO:0031902: late endosome membrane	2.20E-04
14	GO:0005849: mRNA cleavage factor complex	5.82E-04
15	GO:0071782: endoplasmic reticulum tubular network	5.82E-04
16	GO:0005789: endoplasmic reticulum membrane	6.11E-04
17	GO:0005794: Golgi apparatus	6.67E-04
18	GO:0030660: Golgi-associated vesicle membrane	7.73E-04
19	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	7.73E-04
20	GO:0000813: ESCRT I complex	9.77E-04
21	GO:0030904: retromer complex	1.19E-03
22	GO:0030140: trans-Golgi network transport vesicle	1.19E-03
23	GO:0016282: eukaryotic 43S preinitiation complex	1.19E-03
24	GO:0030127: COPII vesicle coat	1.19E-03
25	GO:0005788: endoplasmic reticulum lumen	1.23E-03
26	GO:0033290: eukaryotic 48S preinitiation complex	1.43E-03
27	GO:0031982: vesicle	1.93E-03
28	GO:0012507: ER to Golgi transport vesicle membrane	1.93E-03
29	GO:0000326: protein storage vacuole	2.21E-03
30	GO:0005774: vacuolar membrane	3.07E-03
31	GO:0005765: lysosomal membrane	3.42E-03
32	GO:0048471: perinuclear region of cytoplasm	3.42E-03
33	GO:0005802: trans-Golgi network	3.57E-03
34	GO:0009506: plasmodesma	6.04E-03
35	GO:0005770: late endosome	8.95E-03
36	GO:0005886: plasma membrane	9.06E-03
37	GO:0009504: cell plate	9.90E-03
38	GO:0016592: mediator complex	1.09E-02
39	GO:0000145: exocyst	1.09E-02
40	GO:0005778: peroxisomal membrane	1.24E-02
41	GO:0019005: SCF ubiquitin ligase complex	1.62E-02
42	GO:0000325: plant-type vacuole	1.80E-02
43	GO:0005768: endosome	1.85E-02
44	GO:0005773: vacuole	2.14E-02
45	GO:0031201: SNARE complex	2.17E-02
46	GO:0005634: nucleus	2.39E-02
47	GO:0005856: cytoskeleton	2.50E-02
48	GO:0031966: mitochondrial membrane	2.70E-02
49	GO:0009536: plastid	2.73E-02
50	GO:0022626: cytosolic ribosome	3.86E-02
51	GO:0005737: cytoplasm	4.29E-02
52	GO:0005623: cell	4.37E-02
53	GO:0009524: phragmoplast	4.45E-02