co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G45170

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006573: valine metabolic process	0.00E+00
2	GO:0006114: glycerol biosynthetic process	0.00E+00
3	GO:0000372: Group I intron splicing	0.00E+00
4	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
5	GO:0070979: protein K11-linked ubiquitination	0.00E+00
6	GO:0010081: regulation of inflorescence meristem growth	0.00E+00
7	GO:0010207: photosystem II assembly	4.92E-05
8	GO:0019478: D-amino acid catabolic process	2.63E-04
9	GO:0009090: homoserine biosynthetic process	2.63E-04
10	GO:0000012: single strand break repair	2.63E-04
11	GO:0043266: regulation of potassium ion transport	2.63E-04
12	GO:0010080: regulation of floral meristem growth	2.63E-04
13	GO:0006551: leucine metabolic process	2.63E-04
14	GO:2000021: regulation of ion homeostasis	2.63E-04
15	GO:0006436: tryptophanyl-tRNA aminoacylation	2.63E-04
16	GO:0000066: mitochondrial ornithine transport	2.63E-04
17	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	2.63E-04
18	GO:0000373: Group II intron splicing	3.70E-04
19	GO:0006435: threonyl-tRNA aminoacylation	5.78E-04
20	GO:0010582: floral meristem determinacy	6.76E-04
21	GO:0009793: embryo development ending in seed dormancy	7.55E-04
22	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	9.39E-04
23	GO:0031145: anaphase-promoting complex-dependent catabolic process	9.39E-04
24	GO:0051604: protein maturation	9.39E-04
25	GO:0010022: meristem determinacy	9.39E-04
26	GO:0009800: cinnamic acid biosynthetic process	1.34E-03
27	GO:0010306: rhamnogalacturonan II biosynthetic process	1.34E-03
28	GO:0009067: aspartate family amino acid biosynthetic process	1.34E-03
29	GO:0051513: regulation of monopolar cell growth	1.34E-03
30	GO:0030071: regulation of mitotic metaphase/anaphase transition	1.34E-03
31	GO:0051639: actin filament network formation	1.34E-03
32	GO:0010239: chloroplast mRNA processing	1.34E-03
33	GO:0042989: sequestering of actin monomers	1.34E-03
34	GO:0051781: positive regulation of cell division	1.79E-03
35	GO:0051764: actin crosslink formation	1.79E-03
36	GO:0048442: sepal development	1.79E-03
37	GO:0051322: anaphase	1.79E-03
38	GO:0080110: sporopollenin biosynthetic process	2.29E-03
39	GO:0030041: actin filament polymerization	2.29E-03
40	GO:0045038: protein import into chloroplast thylakoid membrane	2.29E-03
41	GO:0031365: N-terminal protein amino acid modification	2.29E-03
42	GO:0016123: xanthophyll biosynthetic process	2.29E-03
43	GO:0010158: abaxial cell fate specification	2.29E-03
44	GO:0032876: negative regulation of DNA endoreduplication	2.29E-03
45	GO:0045489: pectin biosynthetic process	2.32E-03
46	GO:0007059: chromosome segregation	2.50E-03
47	GO:0010190: cytochrome b6f complex assembly	2.82E-03
48	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.82E-03
49	GO:0006559: L-phenylalanine catabolic process	2.82E-03
50	GO:0000302: response to reactive oxygen species	2.87E-03
51	GO:0007264: small GTPase mediated signal transduction	3.06E-03
52	GO:1901259: chloroplast rRNA processing	3.40E-03
53	GO:0042372: phylloquinone biosynthetic process	3.40E-03
54	GO:0010076: maintenance of floral meristem identity	3.40E-03
55	GO:0009082: branched-chain amino acid biosynthetic process	3.40E-03
56	GO:0009099: valine biosynthetic process	3.40E-03
57	GO:0009088: threonine biosynthetic process	3.40E-03
58	GO:0009648: photoperiodism	3.40E-03
59	GO:0051510: regulation of unidimensional cell growth	4.00E-03
60	GO:0010050: vegetative phase change	4.00E-03
61	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	4.00E-03
62	GO:0006353: DNA-templated transcription, termination	4.65E-03
63	GO:0070413: trehalose metabolism in response to stress	4.65E-03
64	GO:0009850: auxin metabolic process	4.65E-03
65	GO:0032875: regulation of DNA endoreduplication	4.65E-03
66	GO:0048564: photosystem I assembly	4.65E-03
67	GO:0009097: isoleucine biosynthetic process	5.32E-03
68	GO:0032544: plastid translation	5.32E-03
69	GO:0022900: electron transport chain	5.32E-03
70	GO:0009827: plant-type cell wall modification	5.32E-03
71	GO:0010206: photosystem II repair	6.03E-03
72	GO:0009086: methionine biosynthetic process	6.77E-03
73	GO:0048441: petal development	7.54E-03
74	GO:0006535: cysteine biosynthetic process from serine	7.54E-03
75	GO:0006259: DNA metabolic process	7.54E-03
76	GO:0006265: DNA topological change	8.35E-03
77	GO:0009089: lysine biosynthetic process via diaminopimelate	8.35E-03
78	GO:0045037: protein import into chloroplast stroma	9.17E-03
79	GO:0042546: cell wall biogenesis	9.18E-03
80	GO:0006302: double-strand break repair	1.09E-02
81	GO:0048440: carpel development	1.09E-02
82	GO:0090351: seedling development	1.18E-02
83	GO:0007010: cytoskeleton organization	1.38E-02
84	GO:0051017: actin filament bundle assembly	1.38E-02
85	GO:0006289: nucleotide-excision repair	1.38E-02
86	GO:0005992: trehalose biosynthetic process	1.38E-02
87	GO:0019344: cysteine biosynthetic process	1.38E-02
88	GO:0030150: protein import into mitochondrial matrix	1.38E-02
89	GO:0048316: seed development	1.46E-02
90	GO:0008299: isoprenoid biosynthetic process	1.48E-02
91	GO:0006418: tRNA aminoacylation for protein translation	1.48E-02
92	GO:0015992: proton transport	1.58E-02
93	GO:0010431: seed maturation	1.58E-02
94	GO:0035428: hexose transmembrane transport	1.68E-02
95	GO:0019722: calcium-mediated signaling	1.90E-02
96	GO:0010584: pollen exine formation	1.90E-02
97	GO:0048443: stamen development	1.90E-02
98	GO:0055114: oxidation-reduction process	1.91E-02
99	GO:0016117: carotenoid biosynthetic process	2.01E-02
100	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.01E-02
101	GO:0034220: ion transmembrane transport	2.13E-02
102	GO:0010087: phloem or xylem histogenesis	2.13E-02
103	GO:0009958: positive gravitropism	2.24E-02
104	GO:0048868: pollen tube development	2.24E-02
105	GO:0046323: glucose import	2.24E-02
106	GO:0010268: brassinosteroid homeostasis	2.24E-02
107	GO:0009845: seed germination	2.31E-02
108	GO:0048544: recognition of pollen	2.36E-02
109	GO:0016132: brassinosteroid biosynthetic process	2.61E-02
110	GO:0016032: viral process	2.73E-02
111	GO:0006914: autophagy	2.99E-02
112	GO:0016125: sterol metabolic process	2.99E-02
113	GO:0007267: cell-cell signaling	3.12E-02
114	GO:0000910: cytokinesis	3.25E-02
115	GO:0010027: thylakoid membrane organization	3.39E-02
116	GO:0016126: sterol biosynthetic process	3.39E-02
117	GO:0010029: regulation of seed germination	3.52E-02
118	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.52E-02
119	GO:0010411: xyloglucan metabolic process	3.80E-02
120	GO:0016311: dephosphorylation	3.95E-02
121	GO:0048481: plant ovule development	4.09E-02
122	GO:0030244: cellulose biosynthetic process	4.09E-02
123	GO:0009834: plant-type secondary cell wall biogenesis	4.38E-02
124	GO:0048527: lateral root development	4.53E-02
125	GO:0007568: aging	4.53E-02
126	GO:0042254: ribosome biogenesis	4.62E-02
127	GO:0034599: cellular response to oxidative stress	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
2	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
3	GO:0050613: delta14-sterol reductase activity	0.00E+00
4	GO:0005048: signal sequence binding	0.00E+00
5	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
6	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
7	GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity	0.00E+00
8	GO:0004561: alpha-N-acetylglucosaminidase activity	0.00E+00
9	GO:0043022: ribosome binding	2.48E-04
10	GO:0003984: acetolactate synthase activity	2.63E-04
11	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	2.63E-04
12	GO:0004830: tryptophan-tRNA ligase activity	2.63E-04
13	GO:0052624: 2-phytyl-1,4-naphthoquinone methyltransferase activity	2.63E-04
14	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	2.63E-04
15	GO:0080042: ADP-glucose pyrophosphohydrolase activity	2.63E-04
16	GO:0005290: L-histidine transmembrane transporter activity	2.63E-04
17	GO:0048531: beta-1,3-galactosyltransferase activity	5.78E-04
18	GO:0004829: threonine-tRNA ligase activity	5.78E-04
19	GO:0050017: L-3-cyanoalanine synthase activity	5.78E-04
20	GO:0010291: carotene beta-ring hydroxylase activity	5.78E-04
21	GO:0080041: ADP-ribose pyrophosphohydrolase activity	5.78E-04
22	GO:0000064: L-ornithine transmembrane transporter activity	5.78E-04
23	GO:0004412: homoserine dehydrogenase activity	5.78E-04
24	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	8.62E-04
25	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	9.39E-04
26	GO:0070402: NADPH binding	9.39E-04
27	GO:0045548: phenylalanine ammonia-lyase activity	9.39E-04
28	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.34E-03
29	GO:0009678: hydrogen-translocating pyrophosphatase activity	1.34E-03
30	GO:0017172: cysteine dioxygenase activity	1.34E-03
31	GO:0004300: enoyl-CoA hydratase activity	1.34E-03
32	GO:0015189: L-lysine transmembrane transporter activity	1.34E-03
33	GO:0004072: aspartate kinase activity	1.34E-03
34	GO:0015181: arginine transmembrane transporter activity	1.34E-03
35	GO:0070628: proteasome binding	1.79E-03
36	GO:0003785: actin monomer binding	2.29E-03
37	GO:0005525: GTP binding	2.34E-03
38	GO:0031593: polyubiquitin binding	2.82E-03
39	GO:0016688: L-ascorbate peroxidase activity	2.82E-03
40	GO:0004130: cytochrome-c peroxidase activity	2.82E-03
41	GO:0004518: nuclease activity	3.06E-03
42	GO:0004656: procollagen-proline 4-dioxygenase activity	3.40E-03
43	GO:0004124: cysteine synthase activity	3.40E-03
44	GO:0016597: amino acid binding	3.90E-03
45	GO:0008235: metalloexopeptidase activity	4.00E-03
46	GO:0004427: inorganic diphosphatase activity	4.00E-03
47	GO:0008312: 7S RNA binding	4.65E-03
48	GO:0008236: serine-type peptidase activity	5.13E-03
49	GO:0003924: GTPase activity	5.28E-03
50	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	5.32E-03
51	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	5.49E-03
52	GO:0004805: trehalose-phosphatase activity	7.54E-03
53	GO:0005089: Rho guanyl-nucleotide exchange factor activity	8.35E-03
54	GO:0004177: aminopeptidase activity	8.35E-03
55	GO:0015266: protein channel activity	1.00E-02
56	GO:0008081: phosphoric diester hydrolase activity	1.00E-02
57	GO:0031072: heat shock protein binding	1.00E-02
58	GO:0003690: double-stranded DNA binding	1.23E-02
59	GO:0031418: L-ascorbic acid binding	1.38E-02
60	GO:0043130: ubiquitin binding	1.38E-02
61	GO:0005528: FK506 binding	1.38E-02
62	GO:0051087: chaperone binding	1.48E-02
63	GO:0030570: pectate lyase activity	1.79E-02
64	GO:0016491: oxidoreductase activity	1.86E-02
65	GO:0004812: aminoacyl-tRNA ligase activity	2.01E-02
66	GO:0019843: rRNA binding	2.13E-02
67	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.19E-02
68	GO:0004527: exonuclease activity	2.24E-02
69	GO:0008536: Ran GTPase binding	2.24E-02
70	GO:0010181: FMN binding	2.36E-02
71	GO:0005355: glucose transmembrane transporter activity	2.36E-02
72	GO:0050662: coenzyme binding	2.36E-02
73	GO:0016853: isomerase activity	2.36E-02
74	GO:0019901: protein kinase binding	2.48E-02
75	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.61E-02
76	GO:0048038: quinone binding	2.61E-02
77	GO:0051015: actin filament binding	2.86E-02
78	GO:0016791: phosphatase activity	2.99E-02
79	GO:0003684: damaged DNA binding	2.99E-02
80	GO:0016413: O-acetyltransferase activity	3.25E-02
81	GO:0015250: water channel activity	3.39E-02
82	GO:0005506: iron ion binding	3.51E-02
83	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.80E-02
84	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.09E-02
85	GO:0016787: hydrolase activity	4.17E-02
86	GO:0008168: methyltransferase activity	4.37E-02
87	GO:0030145: manganese ion binding	4.53E-02
88	GO:0003746: translation elongation factor activity	4.84E-02
89	GO:0003697: single-stranded DNA binding	4.84E-02
90	GO:0003993: acid phosphatase activity	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0005948: acetolactate synthase complex	0.00E+00
2	GO:0009507: chloroplast	4.31E-13
3	GO:0009535: chloroplast thylakoid membrane	2.12E-04
4	GO:0009570: chloroplast stroma	2.58E-04
5	GO:0080085: signal recognition particle, chloroplast targeting	5.78E-04
6	GO:0032432: actin filament bundle	1.34E-03
7	GO:0009526: plastid envelope	1.79E-03
8	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	1.79E-03
9	GO:0055035: plastid thylakoid membrane	2.29E-03
10	GO:0042807: central vacuole	4.00E-03
11	GO:0030529: intracellular ribonucleoprotein complex	4.14E-03
12	GO:0009579: thylakoid	4.62E-03
13	GO:0031305: integral component of mitochondrial inner membrane	4.65E-03
14	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	5.32E-03
15	GO:0000326: protein storage vacuole	5.32E-03
16	GO:0005680: anaphase-promoting complex	6.03E-03
17	GO:0016604: nuclear body	6.77E-03
18	GO:0031977: thylakoid lumen	8.13E-03
19	GO:0005884: actin filament	8.35E-03
20	GO:0000311: plastid large ribosomal subunit	9.17E-03
21	GO:0005938: cell cortex	1.00E-02
22	GO:0009574: preprophase band	1.00E-02
23	GO:0005578: proteinaceous extracellular matrix	1.00E-02
24	GO:0030176: integral component of endoplasmic reticulum membrane	1.18E-02
25	GO:0042651: thylakoid membrane	1.48E-02
26	GO:0009532: plastid stroma	1.58E-02
27	GO:0009536: plastid	1.64E-02
28	GO:0015629: actin cytoskeleton	1.79E-02
29	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.90E-02
30	GO:0009543: chloroplast thylakoid lumen	2.13E-02
31	GO:0031965: nuclear membrane	2.48E-02
32	GO:0009705: plant-type vacuole membrane	2.94E-02
33	GO:0005768: endosome	3.08E-02
34	GO:0009295: nucleoid	3.12E-02
35	GO:0005840: ribosome	3.84E-02
36	GO:0046658: anchored component of plasma membrane	3.89E-02
37	GO:0019005: SCF ubiquitin ligase complex	4.09E-02
38	GO:0015934: large ribosomal subunit	4.53E-02
39	GO:0009505: plant-type cell wall	4.96E-02