co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G44660

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043972: histone H3-K23 acetylation	0.00E+00
2	GO:0044154: histone H3-K14 acetylation	0.00E+00
3	GO:0019478: D-amino acid catabolic process	9.33E-05
4	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	9.33E-05
5	GO:0051171: regulation of nitrogen compound metabolic process	9.33E-05
6	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	9.33E-05
7	GO:0043971: histone H3-K18 acetylation	9.33E-05
8	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	2.20E-04
9	GO:0009220: pyrimidine ribonucleotide biosynthetic process	2.20E-04
10	GO:0010275: NAD(P)H dehydrogenase complex assembly	2.20E-04
11	GO:0006013: mannose metabolic process	3.67E-04
12	GO:0010306: rhamnogalacturonan II biosynthetic process	5.28E-04
13	GO:0010255: glucose mediated signaling pathway	5.28E-04
14	GO:0015846: polyamine transport	7.02E-04
15	GO:0044205: 'de novo' UMP biosynthetic process	7.02E-04
16	GO:0016558: protein import into peroxisome matrix	8.88E-04
17	GO:0031365: N-terminal protein amino acid modification	8.88E-04
18	GO:0009451: RNA modification	9.61E-04
19	GO:0006655: phosphatidylglycerol biosynthetic process	1.08E-03
20	GO:0009088: threonine biosynthetic process	1.29E-03
21	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	1.51E-03
22	GO:0007155: cell adhesion	1.75E-03
23	GO:0007389: pattern specification process	2.00E-03
24	GO:0044030: regulation of DNA methylation	2.00E-03
25	GO:0009056: catabolic process	2.25E-03
26	GO:0008202: steroid metabolic process	2.52E-03
27	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.52E-03
28	GO:0010380: regulation of chlorophyll biosynthetic process	2.52E-03
29	GO:0010192: mucilage biosynthetic process	2.80E-03
30	GO:0016485: protein processing	3.09E-03
31	GO:0016024: CDP-diacylglycerol biosynthetic process	3.38E-03
32	GO:0009825: multidimensional cell growth	4.33E-03
33	GO:0080188: RNA-directed DNA methylation	4.33E-03
34	GO:0010187: negative regulation of seed germination	5.01E-03
35	GO:0009116: nucleoside metabolic process	5.01E-03
36	GO:0048868: pollen tube development	8.06E-03
37	GO:0008654: phospholipid biosynthetic process	8.90E-03
38	GO:0006635: fatty acid beta-oxidation	9.33E-03
39	GO:0002229: defense response to oomycetes	9.33E-03
40	GO:0010252: auxin homeostasis	1.07E-02
41	GO:0016126: sterol biosynthetic process	1.21E-02
42	GO:0009793: embryo development ending in seed dormancy	1.44E-02
43	GO:0009910: negative regulation of flower development	1.62E-02
44	GO:0009926: auxin polar transport	2.07E-02
45	GO:0006508: proteolysis	2.20E-02
46	GO:0051603: proteolysis involved in cellular protein catabolic process	2.62E-02
47	GO:0043086: negative regulation of catalytic activity	2.88E-02
48	GO:0009740: gibberellic acid mediated signaling pathway	3.15E-02
49	GO:0006355: regulation of transcription, DNA-templated	3.47E-02
50	GO:0009416: response to light stimulus	3.47E-02
51	GO:0042744: hydrogen peroxide catabolic process	4.22E-02
52	GO:0055085: transmembrane transport	4.39E-02
53	GO:0006633: fatty acid biosynthetic process	4.53E-02
54	GO:0016036: cellular response to phosphate starvation	4.61E-02
55	GO:0007623: circadian rhythm	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0004588: orotate phosphoribosyltransferase activity	0.00E+00
2	GO:0004590: orotidine-5'-phosphate decarboxylase activity	0.00E+00
3	GO:0019808: polyamine binding	0.00E+00
4	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
5	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	9.33E-05
6	GO:0004795: threonine synthase activity	9.33E-05
7	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	2.20E-04
8	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	2.20E-04
9	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	3.67E-04
10	GO:0000254: C-4 methylsterol oxidase activity	5.28E-04
11	GO:0010385: double-stranded methylated DNA binding	7.02E-04
12	GO:0004605: phosphatidate cytidylyltransferase activity	1.08E-03
13	GO:0004559: alpha-mannosidase activity	1.29E-03
14	GO:0019899: enzyme binding	1.51E-03
15	GO:0008235: metalloexopeptidase activity	1.51E-03
16	GO:0008142: oxysterol binding	2.00E-03
17	GO:0009672: auxin:proton symporter activity	2.52E-03
18	GO:0015020: glucuronosyltransferase activity	2.80E-03
19	GO:0004713: protein tyrosine kinase activity	2.80E-03
20	GO:0008327: methyl-CpG binding	3.09E-03
21	GO:0004177: aminopeptidase activity	3.09E-03
22	GO:0009982: pseudouridine synthase activity	3.69E-03
23	GO:0010329: auxin efflux transmembrane transporter activity	3.69E-03
24	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.01E-03
25	GO:0004857: enzyme inhibitor activity	5.01E-03
26	GO:0008408: 3'-5' exonuclease activity	5.72E-03
27	GO:0004402: histone acetyltransferase activity	7.65E-03
28	GO:0001085: RNA polymerase II transcription factor binding	8.06E-03
29	GO:0016788: hydrolase activity, acting on ester bonds	1.09E-02
30	GO:0008237: metallopeptidase activity	1.11E-02
31	GO:0030247: polysaccharide binding	1.36E-02
32	GO:0008236: serine-type peptidase activity	1.41E-02
33	GO:0052689: carboxylic ester hydrolase activity	1.46E-02
34	GO:0004222: metalloendopeptidase activity	1.56E-02
35	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.62E-02
36	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.84E-02
37	GO:0042393: histone binding	1.89E-02
38	GO:0005215: transporter activity	1.98E-02
39	GO:0004185: serine-type carboxypeptidase activity	2.07E-02
40	GO:0004519: endonuclease activity	2.13E-02
41	GO:0051537: 2 iron, 2 sulfur cluster binding	2.18E-02
42	GO:0043621: protein self-association	2.18E-02
43	GO:0035091: phosphatidylinositol binding	2.18E-02
44	GO:0003777: microtubule motor activity	2.75E-02
45	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.08E-02
46	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.08E-02
47	GO:0022857: transmembrane transporter activity	3.15E-02
48	GO:0000166: nucleotide binding	3.47E-02
49	GO:0004386: helicase activity	3.49E-02
50	GO:0016758: transferase activity, transferring hexosyl groups	3.78E-02
51	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.22E-02
52	GO:0015144: carbohydrate transmembrane transporter activity	4.38E-02
53	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.56E-02
54	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.61E-02
55	GO:0046910: pectinesterase inhibitor activity	4.61E-02
56	GO:0030246: carbohydrate binding	4.65E-02
57	GO:0005351: sugar:proton symporter activity	4.76E-02
58	GO:0008017: microtubule binding	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0010370: perinucleolar chromocenter	9.33E-05
3	GO:0009507: chloroplast	3.60E-04
4	GO:0009897: external side of plasma membrane	3.67E-04
5	GO:0005720: nuclear heterochromatin	2.25E-03
6	GO:0015030: Cajal body	2.52E-03
7	GO:0005686: U2 snRNP	2.80E-03
8	GO:0009505: plant-type cell wall	5.70E-03
9	GO:0046658: anchored component of plasma membrane	9.11E-03
10	GO:0005802: trans-Golgi network	1.30E-02
11	GO:0005667: transcription factor complex	1.31E-02
12	GO:0009707: chloroplast outer membrane	1.46E-02
13	GO:0005768: endosome	1.53E-02
14	GO:0005819: spindle	1.84E-02
15	GO:0031977: thylakoid lumen	1.95E-02
16	GO:0043231: intracellular membrane-bounded organelle	2.16E-02
17	GO:0009536: plastid	2.26E-02
18	GO:0005681: spliceosomal complex	2.88E-02
19	GO:0005789: endoplasmic reticulum membrane	2.97E-02
20	GO:0005834: heterotrimeric G-protein complex	3.01E-02
21	GO:0009543: chloroplast thylakoid lumen	3.85E-02
22	GO:0005759: mitochondrial matrix	4.53E-02
23	GO:0009535: chloroplast thylakoid membrane	4.75E-02
24	GO:0005773: vacuole	4.86E-02