Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G44190

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905157: positive regulation of photosynthesis0.00E+00
2GO:0015843: methylammonium transport0.00E+00
3GO:0043488: regulation of mRNA stability0.00E+00
4GO:1902171: regulation of tocopherol cyclase activity0.00E+00
5GO:0033494: ferulate metabolic process0.00E+00
6GO:0042821: pyridoxal biosynthetic process0.00E+00
7GO:0016118: carotenoid catabolic process0.00E+00
8GO:0015882: L-ascorbic acid transport0.00E+00
9GO:0046471: phosphatidylglycerol metabolic process0.00E+00
10GO:0042820: vitamin B6 catabolic process0.00E+00
11GO:0006480: N-terminal protein amino acid methylation0.00E+00
12GO:0032502: developmental process2.28E-05
13GO:0009658: chloroplast organization6.99E-05
14GO:0009854: oxidative photosynthetic carbon pathway1.53E-04
15GO:0010028: xanthophyll cycle2.68E-04
16GO:0000476: maturation of 4.5S rRNA2.68E-04
17GO:0009443: pyridoxal 5'-phosphate salvage2.68E-04
18GO:0000967: rRNA 5'-end processing2.68E-04
19GO:0080112: seed growth2.68E-04
20GO:1905039: carboxylic acid transmembrane transport2.68E-04
21GO:1905200: gibberellic acid transmembrane transport2.68E-04
22GO:0043953: protein transport by the Tat complex2.68E-04
23GO:0046467: membrane lipid biosynthetic process2.68E-04
24GO:0006637: acyl-CoA metabolic process2.68E-04
25GO:0051775: response to redox state2.68E-04
26GO:0065002: intracellular protein transmembrane transport2.68E-04
27GO:0019252: starch biosynthetic process2.85E-04
28GO:0009657: plastid organization3.14E-04
29GO:0005982: starch metabolic process4.50E-04
30GO:0016121: carotene catabolic process5.89E-04
31GO:0034470: ncRNA processing5.89E-04
32GO:0051645: Golgi localization5.89E-04
33GO:1902326: positive regulation of chlorophyll biosynthetic process5.89E-04
34GO:0016124: xanthophyll catabolic process5.89E-04
35GO:0034755: iron ion transmembrane transport5.89E-04
36GO:0071457: cellular response to ozone5.89E-04
37GO:0060151: peroxisome localization5.89E-04
38GO:0000256: allantoin catabolic process5.89E-04
39GO:1904143: positive regulation of carotenoid biosynthetic process5.89E-04
40GO:0030048: actin filament-based movement7.86E-04
41GO:0048467: gynoecium development8.84E-04
42GO:0010020: chloroplast fission8.84E-04
43GO:0005977: glycogen metabolic process9.55E-04
44GO:0051646: mitochondrion localization9.55E-04
45GO:0010136: ureide catabolic process9.55E-04
46GO:0090436: leaf pavement cell development9.55E-04
47GO:0009768: photosynthesis, light harvesting in photosystem I1.33E-03
48GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.36E-03
49GO:0071484: cellular response to light intensity1.36E-03
50GO:0009152: purine ribonucleotide biosynthetic process1.36E-03
51GO:0046653: tetrahydrofolate metabolic process1.36E-03
52GO:0006107: oxaloacetate metabolic process1.36E-03
53GO:0009052: pentose-phosphate shunt, non-oxidative branch1.36E-03
54GO:0006145: purine nucleobase catabolic process1.36E-03
55GO:0010731: protein glutathionylation1.36E-03
56GO:0015696: ammonium transport1.36E-03
57GO:0071786: endoplasmic reticulum tubular network organization1.36E-03
58GO:0019748: secondary metabolic process1.60E-03
59GO:0015976: carbon utilization1.83E-03
60GO:0071486: cellular response to high light intensity1.83E-03
61GO:0015689: molybdate ion transport1.83E-03
62GO:0009765: photosynthesis, light harvesting1.83E-03
63GO:0072488: ammonium transmembrane transport1.83E-03
64GO:0010107: potassium ion import1.83E-03
65GO:2000122: negative regulation of stomatal complex development1.83E-03
66GO:0006734: NADH metabolic process1.83E-03
67GO:0010021: amylopectin biosynthetic process1.83E-03
68GO:0010037: response to carbon dioxide1.83E-03
69GO:0006465: signal peptide processing2.33E-03
70GO:0071493: cellular response to UV-B2.33E-03
71GO:0098719: sodium ion import across plasma membrane2.33E-03
72GO:0006564: L-serine biosynthetic process2.33E-03
73GO:0000278: mitotic cell cycle2.33E-03
74GO:0009791: post-embryonic development2.75E-03
75GO:0010190: cytochrome b6f complex assembly2.88E-03
76GO:0009643: photosynthetic acclimation2.88E-03
77GO:0050665: hydrogen peroxide biosynthetic process2.88E-03
78GO:0071333: cellular response to glucose stimulus3.46E-03
79GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity3.46E-03
80GO:1901259: chloroplast rRNA processing3.46E-03
81GO:0009769: photosynthesis, light harvesting in photosystem II4.08E-03
82GO:0009645: response to low light intensity stimulus4.08E-03
83GO:0052543: callose deposition in cell wall4.73E-03
84GO:0016559: peroxisome fission4.73E-03
85GO:0042255: ribosome assembly4.73E-03
86GO:0006353: DNA-templated transcription, termination4.73E-03
87GO:0070413: trehalose metabolism in response to stress4.73E-03
88GO:0009690: cytokinin metabolic process4.73E-03
89GO:0010078: maintenance of root meristem identity4.73E-03
90GO:0050821: protein stabilization4.73E-03
91GO:0055075: potassium ion homeostasis4.73E-03
92GO:0071482: cellular response to light stimulus5.42E-03
93GO:0019430: removal of superoxide radicals5.42E-03
94GO:0010204: defense response signaling pathway, resistance gene-independent5.42E-03
95GO:0043562: cellular response to nitrogen levels5.42E-03
96GO:0018298: protein-chromophore linkage5.54E-03
97GO:0010218: response to far red light6.11E-03
98GO:0098656: anion transmembrane transport6.14E-03
99GO:0009821: alkaloid biosynthetic process6.14E-03
100GO:0006098: pentose-phosphate shunt6.14E-03
101GO:0090333: regulation of stomatal closure6.14E-03
102GO:0051453: regulation of intracellular pH6.90E-03
103GO:0007346: regulation of mitotic cell cycle6.90E-03
104GO:0009637: response to blue light7.02E-03
105GO:0009853: photorespiration7.02E-03
106GO:0034599: cellular response to oxidative stress7.34E-03
107GO:0006810: transport7.89E-03
108GO:0009684: indoleacetic acid biosynthetic process8.50E-03
109GO:0009773: photosynthetic electron transport in photosystem I8.50E-03
110GO:0072593: reactive oxygen species metabolic process8.50E-03
111GO:0015770: sucrose transport8.50E-03
112GO:0006415: translational termination8.50E-03
113GO:0006879: cellular iron ion homeostasis8.50E-03
114GO:0010114: response to red light9.06E-03
115GO:0006094: gluconeogenesis1.02E-02
116GO:0009767: photosynthetic electron transport chain1.02E-02
117GO:0010588: cotyledon vascular tissue pattern formation1.02E-02
118GO:0006108: malate metabolic process1.02E-02
119GO:0010143: cutin biosynthetic process1.11E-02
120GO:0010207: photosystem II assembly1.11E-02
121GO:0009901: anther dehiscence1.21E-02
122GO:0019853: L-ascorbic acid biosynthetic process1.21E-02
123GO:0006636: unsaturated fatty acid biosynthetic process1.30E-02
124GO:0042023: DNA endoreduplication1.30E-02
125GO:0009833: plant-type primary cell wall biogenesis1.30E-02
126GO:0005992: trehalose biosynthetic process1.40E-02
127GO:0019915: lipid storage1.61E-02
128GO:0009269: response to desiccation1.61E-02
129GO:0003333: amino acid transmembrane transport1.61E-02
130GO:0015979: photosynthesis1.62E-02
131GO:0030433: ubiquitin-dependent ERAD pathway1.71E-02
132GO:0009624: response to nematode1.75E-02
133GO:0006012: galactose metabolic process1.82E-02
134GO:0071215: cellular response to abscisic acid stimulus1.82E-02
135GO:0009306: protein secretion1.94E-02
136GO:0055114: oxidation-reduction process2.08E-02
137GO:0042631: cellular response to water deprivation2.17E-02
138GO:0080022: primary root development2.17E-02
139GO:0010087: phloem or xylem histogenesis2.17E-02
140GO:0009741: response to brassinosteroid2.29E-02
141GO:0009958: positive gravitropism2.29E-02
142GO:0006885: regulation of pH2.29E-02
143GO:0006520: cellular amino acid metabolic process2.29E-02
144GO:0071472: cellular response to salt stress2.29E-02
145GO:0010154: fruit development2.29E-02
146GO:0009058: biosynthetic process2.31E-02
147GO:0007059: chromosome segregation2.41E-02
148GO:0009646: response to absence of light2.41E-02
149GO:0006814: sodium ion transport2.41E-02
150GO:0005975: carbohydrate metabolic process2.47E-02
151GO:0009851: auxin biosynthetic process2.53E-02
152GO:0048825: cotyledon development2.53E-02
153GO:0009630: gravitropism2.78E-02
154GO:0007264: small GTPase mediated signal transduction2.78E-02
155GO:1901657: glycosyl compound metabolic process2.91E-02
156GO:0010090: trichome morphogenesis2.91E-02
157GO:0009567: double fertilization forming a zygote and endosperm3.04E-02
158GO:0010027: thylakoid membrane organization3.45E-02
159GO:0008380: RNA splicing3.60E-02
160GO:0016311: dephosphorylation4.02E-02
161GO:0016049: cell growth4.02E-02
162GO:0030244: cellulose biosynthetic process4.17E-02
163GO:0006811: ion transport4.47E-02
164GO:0009416: response to light stimulus4.57E-02
165GO:0048527: lateral root development4.62E-02
166GO:0010119: regulation of stomatal movement4.62E-02
RankGO TermAdjusted P value
1GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
2GO:0010349: L-galactose dehydrogenase activity0.00E+00
3GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
4GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
5GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
6GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity0.00E+00
7GO:0015229: L-ascorbic acid transporter activity0.00E+00
8GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
9GO:0008465: glycerate dehydrogenase activity0.00E+00
10GO:0009011: starch synthase activity3.14E-07
11GO:0004033: aldo-keto reductase (NADP) activity2.55E-04
12GO:1905201: gibberellin transmembrane transporter activity2.68E-04
13GO:0008746: NAD(P)+ transhydrogenase activity2.68E-04
14GO:0004328: formamidase activity2.68E-04
15GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity5.89E-04
16GO:0009977: proton motive force dependent protein transmembrane transporter activity5.89E-04
17GO:0004617: phosphoglycerate dehydrogenase activity5.89E-04
18GO:0033201: alpha-1,4-glucan synthase activity5.89E-04
19GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity5.89E-04
20GO:0080097: L-tryptophan:pyruvate aminotransferase activity5.89E-04
21GO:0061575: cyclin-dependent protein serine/threonine kinase activator activity5.89E-04
22GO:0019156: isoamylase activity5.89E-04
23GO:0004103: choline kinase activity5.89E-04
24GO:0015386: potassium:proton antiporter activity6.07E-04
25GO:0003774: motor activity8.84E-04
26GO:0008864: formyltetrahydrofolate deformylase activity9.55E-04
27GO:0004373: glycogen (starch) synthase activity9.55E-04
28GO:0050734: hydroxycinnamoyltransferase activity9.55E-04
29GO:0004848: ureidoglycolate hydrolase activity9.55E-04
30GO:0004751: ribose-5-phosphate isomerase activity9.55E-04
31GO:0016742: hydroxymethyl-, formyl- and related transferase activity9.55E-04
32GO:0070402: NADPH binding9.55E-04
33GO:0003993: acid phosphatase activity1.01E-03
34GO:0031409: pigment binding1.10E-03
35GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity1.36E-03
36GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity1.36E-03
37GO:0022890: inorganic cation transmembrane transporter activity1.36E-03
38GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.36E-03
39GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity1.36E-03
40GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.83E-03
41GO:0004045: aminoacyl-tRNA hydrolase activity1.83E-03
42GO:0080032: methyl jasmonate esterase activity1.83E-03
43GO:0015098: molybdate ion transmembrane transporter activity1.83E-03
44GO:0008891: glycolate oxidase activity1.83E-03
45GO:0016846: carbon-sulfur lyase activity2.33E-03
46GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity2.33E-03
47GO:0008519: ammonium transmembrane transporter activity2.88E-03
48GO:2001070: starch binding2.88E-03
49GO:0080030: methyl indole-3-acetate esterase activity2.88E-03
50GO:0004332: fructose-bisphosphate aldolase activity2.88E-03
51GO:0004784: superoxide dismutase activity2.88E-03
52GO:0004556: alpha-amylase activity2.88E-03
53GO:0015081: sodium ion transmembrane transporter activity2.88E-03
54GO:0016615: malate dehydrogenase activity2.88E-03
55GO:0008200: ion channel inhibitor activity2.88E-03
56GO:0008195: phosphatidate phosphatase activity3.46E-03
57GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity3.46E-03
58GO:0030060: L-malate dehydrogenase activity3.46E-03
59GO:0003730: mRNA 3'-UTR binding3.46E-03
60GO:0016168: chlorophyll binding4.49E-03
61GO:0008135: translation factor activity, RNA binding5.42E-03
62GO:0003747: translation release factor activity6.14E-03
63GO:0016491: oxidoreductase activity6.38E-03
64GO:0016844: strictosidine synthase activity6.90E-03
65GO:0005381: iron ion transmembrane transporter activity6.90E-03
66GO:0015174: basic amino acid transmembrane transporter activity6.90E-03
67GO:0047617: acyl-CoA hydrolase activity6.90E-03
68GO:0004712: protein serine/threonine/tyrosine kinase activity7.67E-03
69GO:0015020: glucuronosyltransferase activity7.68E-03
70GO:0042802: identical protein binding8.11E-03
71GO:0008515: sucrose transmembrane transporter activity8.50E-03
72GO:0008559: xenobiotic-transporting ATPase activity8.50E-03
73GO:0004185: serine-type carboxypeptidase activity9.06E-03
74GO:0003725: double-stranded RNA binding1.02E-02
75GO:0004565: beta-galactosidase activity1.02E-02
76GO:0004022: alcohol dehydrogenase (NAD) activity1.02E-02
77GO:0005315: inorganic phosphate transmembrane transporter activity1.02E-02
78GO:0004089: carbonate dehydratase activity1.02E-02
79GO:0016788: hydrolase activity, acting on ester bonds1.07E-02
80GO:0051287: NAD binding1.10E-02
81GO:0008266: poly(U) RNA binding1.11E-02
82GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.11E-02
83GO:0051119: sugar transmembrane transporter activity1.21E-02
84GO:0043130: ubiquitin binding1.40E-02
85GO:0005528: FK506 binding1.40E-02
86GO:0005216: ion channel activity1.50E-02
87GO:0015079: potassium ion transmembrane transporter activity1.50E-02
88GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.50E-02
89GO:0016787: hydrolase activity1.64E-02
90GO:0016760: cellulose synthase (UDP-forming) activity1.82E-02
91GO:0008514: organic anion transmembrane transporter activity1.94E-02
92GO:0003727: single-stranded RNA binding1.94E-02
93GO:0019843: rRNA binding2.19E-02
94GO:0004672: protein kinase activity2.33E-02
95GO:0015299: solute:proton antiporter activity2.41E-02
96GO:0010181: FMN binding2.41E-02
97GO:0019901: protein kinase binding2.53E-02
98GO:0048038: quinone binding2.65E-02
99GO:0005525: GTP binding2.76E-02
100GO:0015385: sodium:proton antiporter activity2.91E-02
101GO:0016759: cellulose synthase activity3.04E-02
102GO:0016791: phosphatase activity3.04E-02
103GO:0008237: metallopeptidase activity3.18E-02
104GO:0016597: amino acid binding3.31E-02
105GO:0102483: scopolin beta-glucosidase activity3.88E-02
106GO:0004693: cyclin-dependent protein serine/threonine kinase activity4.47E-02
107GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.62E-02
108GO:0003746: translation elongation factor activity4.93E-02
RankGO TermAdjusted P value
1GO:0043235: receptor complex0.00E+00
2GO:0009507: chloroplast9.15E-18
3GO:0009535: chloroplast thylakoid membrane3.21E-07
4GO:0033281: TAT protein transport complex1.18E-05
5GO:0009941: chloroplast envelope7.67E-05
6GO:0009522: photosystem I2.59E-04
7GO:0031361: integral component of thylakoid membrane2.68E-04
8GO:0005787: signal peptidase complex2.68E-04
9GO:0009344: nitrite reductase complex [NAD(P)H]2.68E-04
10GO:0005773: vacuole3.86E-04
11GO:0016459: myosin complex5.26E-04
12GO:0043036: starch grain5.89E-04
13GO:0010287: plastoglobule6.41E-04
14GO:0009543: chloroplast thylakoid lumen6.96E-04
15GO:0009570: chloroplast stroma7.65E-04
16GO:0030076: light-harvesting complex9.87E-04
17GO:0009534: chloroplast thylakoid1.34E-03
18GO:0030658: transport vesicle membrane1.36E-03
19GO:0071782: endoplasmic reticulum tubular network1.36E-03
20GO:0009517: PSII associated light-harvesting complex II1.83E-03
21GO:0009526: plastid envelope1.83E-03
22GO:0009523: photosystem II2.75E-03
23GO:0031969: chloroplast membrane3.04E-03
24GO:0009501: amyloplast4.73E-03
25GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane4.73E-03
26GO:0000307: cyclin-dependent protein kinase holoenzyme complex5.42E-03
27GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)6.14E-03
28GO:0031977: thylakoid lumen8.35E-03
29GO:0005765: lysosomal membrane8.50E-03
30GO:0009508: plastid chromosome1.02E-02
31GO:0030095: chloroplast photosystem II1.11E-02
32GO:0009654: photosystem II oxygen evolving complex1.50E-02
33GO:0042651: thylakoid membrane1.50E-02
34GO:0005777: peroxisome1.62E-02
35GO:0009579: thylakoid1.72E-02
36GO:0019898: extrinsic component of membrane2.53E-02
37GO:0009295: nucleoid3.18E-02
38GO:0005887: integral component of plasma membrane3.29E-02
39GO:0030529: intracellular ribonucleoprotein complex3.45E-02
40GO:0016021: integral component of membrane3.89E-02
41GO:0019005: SCF ubiquitin ligase complex4.17E-02
42GO:0009707: chloroplast outer membrane4.17E-02
43GO:0048046: apoplast4.37E-02
44GO:0000325: plant-type vacuole4.62E-02
<
Gene type



Gene DE type