co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G43860

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
2	GO:0080149: sucrose induced translational repression	0.00E+00
3	GO:0097250: mitochondrial respiratory chain supercomplex assembly	0.00E+00
4	GO:0046680: response to DDT	0.00E+00
5	GO:0002084: protein depalmitoylation	0.00E+00
6	GO:0006605: protein targeting	5.09E-05
7	GO:0006886: intracellular protein transport	5.34E-05
8	GO:1900384: regulation of flavonol biosynthetic process	9.33E-05
9	GO:0042350: GDP-L-fucose biosynthetic process	9.33E-05
10	GO:0010421: hydrogen peroxide-mediated programmed cell death	9.33E-05
11	GO:0000032: cell wall mannoprotein biosynthetic process	9.33E-05
12	GO:0019478: D-amino acid catabolic process	9.33E-05
13	GO:0009156: ribonucleoside monophosphate biosynthetic process	2.20E-04
14	GO:0009805: coumarin biosynthetic process	2.20E-04
15	GO:0042853: L-alanine catabolic process	2.20E-04
16	GO:0080026: response to indolebutyric acid	2.20E-04
17	GO:0009062: fatty acid catabolic process	3.67E-04
18	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	3.67E-04
19	GO:0010253: UDP-rhamnose biosynthetic process	3.67E-04
20	GO:0006651: diacylglycerol biosynthetic process	3.67E-04
21	GO:0033591: response to L-ascorbic acid	3.67E-04
22	GO:0080024: indolebutyric acid metabolic process	5.28E-04
23	GO:0009298: GDP-mannose biosynthetic process	5.28E-04
24	GO:0009226: nucleotide-sugar biosynthetic process	5.28E-04
25	GO:0009165: nucleotide biosynthetic process	7.02E-04
26	GO:1902584: positive regulation of response to water deprivation	7.02E-04
27	GO:0010363: regulation of plant-type hypersensitive response	7.02E-04
28	GO:0030163: protein catabolic process	8.05E-04
29	GO:0097428: protein maturation by iron-sulfur cluster transfer	8.88E-04
30	GO:0045927: positive regulation of growth	8.88E-04
31	GO:0006555: methionine metabolic process	1.08E-03
32	GO:0042176: regulation of protein catabolic process	1.08E-03
33	GO:0010315: auxin efflux	1.08E-03
34	GO:0017148: negative regulation of translation	1.29E-03
35	GO:0080113: regulation of seed growth	1.29E-03
36	GO:0019509: L-methionine salvage from methylthioadenosine	1.29E-03
37	GO:0034389: lipid particle organization	1.29E-03
38	GO:0010043: response to zinc ion	1.50E-03
39	GO:0006401: RNA catabolic process	1.51E-03
40	GO:0006744: ubiquinone biosynthetic process	1.51E-03
41	GO:0080186: developmental vegetative growth	1.51E-03
42	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.51E-03
43	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.75E-03
44	GO:0030968: endoplasmic reticulum unfolded protein response	2.00E-03
45	GO:0009699: phenylpropanoid biosynthetic process	2.00E-03
46	GO:0006002: fructose 6-phosphate metabolic process	2.00E-03
47	GO:0009744: response to sucrose	2.10E-03
48	GO:0006511: ubiquitin-dependent protein catabolic process	2.21E-03
49	GO:0016192: vesicle-mediated transport	2.25E-03
50	GO:0015780: nucleotide-sugar transport	2.25E-03
51	GO:0009835: fruit ripening	2.25E-03
52	GO:0090305: nucleic acid phosphodiester bond hydrolysis	2.25E-03
53	GO:0009636: response to toxic substance	2.36E-03
54	GO:0000103: sulfate assimilation	2.80E-03
55	GO:0051555: flavonol biosynthetic process	2.80E-03
56	GO:0046856: phosphatidylinositol dephosphorylation	3.09E-03
57	GO:0055046: microgametogenesis	3.69E-03
58	GO:0010053: root epidermal cell differentiation	4.33E-03
59	GO:0009225: nucleotide-sugar metabolic process	4.33E-03
60	GO:0009825: multidimensional cell growth	4.33E-03
61	GO:0019853: L-ascorbic acid biosynthetic process	4.33E-03
62	GO:0034976: response to endoplasmic reticulum stress	4.67E-03
63	GO:0009116: nucleoside metabolic process	5.01E-03
64	GO:0030150: protein import into mitochondrial matrix	5.01E-03
65	GO:0055114: oxidation-reduction process	5.07E-03
66	GO:0008299: isoprenoid biosynthetic process	5.36E-03
67	GO:0019915: lipid storage	5.72E-03
68	GO:0019748: secondary metabolic process	6.09E-03
69	GO:0009814: defense response, incompatible interaction	6.09E-03
70	GO:0009411: response to UV	6.47E-03
71	GO:0042127: regulation of cell proliferation	6.85E-03
72	GO:0009651: response to salt stress	7.48E-03
73	GO:0046686: response to cadmium ion	7.92E-03
74	GO:0006662: glycerol ether metabolic process	8.06E-03
75	GO:0048868: pollen tube development	8.06E-03
76	GO:0009646: response to absence of light	8.47E-03
77	GO:0006635: fatty acid beta-oxidation	9.33E-03
78	GO:0016032: viral process	9.78E-03
79	GO:0019760: glucosinolate metabolic process	1.07E-02
80	GO:0007275: multicellular organism development	1.13E-02
81	GO:0001666: response to hypoxia	1.21E-02
82	GO:0048767: root hair elongation	1.51E-02
83	GO:0006811: ion transport	1.56E-02
84	GO:0006499: N-terminal protein myristoylation	1.56E-02
85	GO:0045454: cell redox homeostasis	1.59E-02
86	GO:0007568: aging	1.62E-02
87	GO:0034599: cellular response to oxidative stress	1.78E-02
88	GO:0006631: fatty acid metabolic process	1.95E-02
89	GO:0010114: response to red light	2.07E-02
90	GO:0051707: response to other organism	2.07E-02
91	GO:0015031: protein transport	2.36E-02
92	GO:0006486: protein glycosylation	2.55E-02
93	GO:0051603: proteolysis involved in cellular protein catabolic process	2.62E-02
94	GO:0010224: response to UV-B	2.62E-02
95	GO:0006096: glycolytic process	2.88E-02
96	GO:0009553: embryo sac development	3.21E-02
97	GO:0009555: pollen development	3.47E-02
98	GO:0009058: biosynthetic process	4.00E-02
99	GO:0009790: embryo development	4.30E-02
100	GO:0006457: protein folding	4.48E-02
101	GO:0010150: leaf senescence	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0051499: D-aminoacyl-tRNA deacylase activity	0.00E+00
2	GO:0016504: peptidase activator activity	0.00E+00
3	GO:0070577: lysine-acetylated histone binding	0.00E+00
4	GO:0008320: protein transmembrane transporter activity	3.89E-05
5	GO:0016229: steroid dehydrogenase activity	9.33E-05
6	GO:0050577: GDP-L-fucose synthase activity	9.33E-05
7	GO:0070401: NADP+ binding	9.33E-05
8	GO:0030942: endoplasmic reticulum signal peptide binding	9.33E-05
9	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	9.33E-05
10	GO:0043813: phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity	9.33E-05
11	GO:0004476: mannose-6-phosphate isomerase activity	9.33E-05
12	GO:0010297: heteropolysaccharide binding	2.20E-04
13	GO:0008460: dTDP-glucose 4,6-dehydratase activity	2.20E-04
14	GO:0010280: UDP-L-rhamnose synthase activity	2.20E-04
15	GO:0050347: trans-octaprenyltranstransferase activity	2.20E-04
16	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	2.20E-04
17	GO:0000774: adenyl-nucleotide exchange factor activity	2.20E-04
18	GO:0050377: UDP-glucose 4,6-dehydratase activity	2.20E-04
19	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	3.67E-04
20	GO:0005460: UDP-glucose transmembrane transporter activity	5.28E-04
21	GO:0016656: monodehydroascorbate reductase (NADH) activity	5.28E-04
22	GO:0004165: dodecenoyl-CoA delta-isomerase activity	5.28E-04
23	GO:0004749: ribose phosphate diphosphokinase activity	5.28E-04
24	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	5.28E-04
25	GO:0016853: isomerase activity	6.22E-04
26	GO:0004659: prenyltransferase activity	7.02E-04
27	GO:0070628: proteasome binding	7.02E-04
28	GO:0005459: UDP-galactose transmembrane transporter activity	8.88E-04
29	GO:0008474: palmitoyl-(protein) hydrolase activity	1.08E-03
30	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	1.08E-03
31	GO:0004656: procollagen-proline 4-dioxygenase activity	1.29E-03
32	GO:0008195: phosphatidate phosphatase activity	1.29E-03
33	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.29E-03
34	GO:0003872: 6-phosphofructokinase activity	1.51E-03
35	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.64E-03
36	GO:0003746: translation elongation factor activity	1.64E-03
37	GO:0008312: 7S RNA binding	1.75E-03
38	GO:0004033: aldo-keto reductase (NADP) activity	1.75E-03
39	GO:0030234: enzyme regulator activity	2.80E-03
40	GO:0004161: dimethylallyltranstransferase activity	3.09E-03
41	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	3.38E-03
42	GO:0031072: heat shock protein binding	3.69E-03
43	GO:0051082: unfolded protein binding	3.99E-03
44	GO:0004175: endopeptidase activity	4.01E-03
45	GO:0051536: iron-sulfur cluster binding	5.01E-03
46	GO:0031418: L-ascorbic acid binding	5.01E-03
47	GO:0051087: chaperone binding	5.36E-03
48	GO:0004298: threonine-type endopeptidase activity	5.72E-03
49	GO:0003756: protein disulfide isomerase activity	6.85E-03
50	GO:0047134: protein-disulfide reductase activity	7.25E-03
51	GO:0004791: thioredoxin-disulfide reductase activity	8.47E-03
52	GO:0050662: coenzyme binding	8.47E-03
53	GO:0004518: nuclease activity	9.78E-03
54	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.02E-02
55	GO:0008237: metallopeptidase activity	1.11E-02
56	GO:0051213: dioxygenase activity	1.21E-02
57	GO:0050660: flavin adenine dinucleotide binding	1.23E-02
58	GO:0008375: acetylglucosaminyltransferase activity	1.31E-02
59	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.46E-02
60	GO:0003824: catalytic activity	1.96E-02
61	GO:0005198: structural molecule activity	2.24E-02
62	GO:0016491: oxidoreductase activity	2.47E-02
63	GO:0031625: ubiquitin protein ligase binding	2.75E-02
64	GO:0016887: ATPase activity	3.03E-02
65	GO:0022857: transmembrane transporter activity	3.15E-02
66	GO:0015035: protein disulfide oxidoreductase activity	3.35E-02
67	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.93E-02
68	GO:0030170: pyridoxal phosphate binding	4.15E-02
69	GO:0030246: carbohydrate binding	4.65E-02
70	GO:0005507: copper ion binding	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0000502: proteasome complex	1.90E-05
2	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.89E-05
3	GO:0001405: presequence translocase-associated import motor	9.33E-05
4	GO:0008541: proteasome regulatory particle, lid subcomplex	1.37E-04
5	GO:0005839: proteasome core complex	3.56E-04
6	GO:0030130: clathrin coat of trans-Golgi network vesicle	3.67E-04
7	GO:0030132: clathrin coat of coated pit	3.67E-04
8	GO:0005789: endoplasmic reticulum membrane	4.48E-04
9	GO:0032580: Golgi cisterna membrane	8.55E-04
10	GO:0005945: 6-phosphofructokinase complex	8.88E-04
11	GO:0005737: cytoplasm	9.94E-04
12	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.00E-03
13	GO:0005811: lipid particle	2.00E-03
14	GO:0008540: proteasome regulatory particle, base subcomplex	2.52E-03
15	GO:0030176: integral component of endoplasmic reticulum membrane	4.33E-03
16	GO:0005829: cytosol	5.89E-03
17	GO:0005744: mitochondrial inner membrane presequence translocase complex	6.85E-03
18	GO:0005788: endoplasmic reticulum lumen	1.26E-02
19	GO:0009536: plastid	2.26E-02
20	GO:0005783: endoplasmic reticulum	2.63E-02
21	GO:0005739: mitochondrion	2.86E-02
22	GO:0009706: chloroplast inner membrane	3.28E-02
23	GO:0005623: cell	3.93E-02
24	GO:0005759: mitochondrial matrix	4.53E-02