co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G43700

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006907: pinocytosis	0.00E+00
2	GO:0045014: negative regulation of transcription by glucose	0.00E+00
3	GO:0000819: sister chromatid segregation	0.00E+00
4	GO:0044774: mitotic DNA integrity checkpoint	0.00E+00
5	GO:0034214: protein hexamerization	1.50E-04
6	GO:0080005: photosystem stoichiometry adjustment	3.42E-04
7	GO:0061062: regulation of nematode larval development	3.42E-04
8	GO:0048513: animal organ development	5.61E-04
9	GO:0048575: short-day photoperiodism, flowering	5.61E-04
10	GO:0009686: gibberellin biosynthetic process	7.93E-04
11	GO:0010321: regulation of vegetative phase change	8.03E-04
12	GO:0007276: gamete generation	8.03E-04
13	GO:0042991: transcription factor import into nucleus	1.06E-03
14	GO:0048629: trichome patterning	1.06E-03
15	GO:0048497: maintenance of floral organ identity	1.35E-03
16	GO:0009567: double fertilization forming a zygote and endosperm	1.58E-03
17	GO:0010190: cytochrome b6f complex assembly	1.65E-03
18	GO:0000712: resolution of meiotic recombination intermediates	2.33E-03
19	GO:0030497: fatty acid elongation	2.33E-03
20	GO:0010492: maintenance of shoot apical meristem identity	2.70E-03
21	GO:0048589: developmental growth	3.49E-03
22	GO:0009638: phototropism	3.91E-03
23	GO:0009641: shade avoidance	4.35E-03
24	GO:0006949: syncytium formation	4.35E-03
25	GO:0006259: DNA metabolic process	4.35E-03
26	GO:0019538: protein metabolic process	4.35E-03
27	GO:0048366: leaf development	4.49E-03
28	GO:0006265: DNA topological change	4.80E-03
29	GO:0008285: negative regulation of cell proliferation	4.80E-03
30	GO:0009664: plant-type cell wall organization	4.99E-03
31	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.00E-03
32	GO:0010152: pollen maturation	5.27E-03
33	GO:0006312: mitotic recombination	5.27E-03
34	GO:0012501: programmed cell death	5.27E-03
35	GO:0045037: protein import into chloroplast stroma	5.27E-03
36	GO:0010628: positive regulation of gene expression	5.75E-03
37	GO:0009767: photosynthetic electron transport chain	5.75E-03
38	GO:0010102: lateral root morphogenesis	5.75E-03
39	GO:0009785: blue light signaling pathway	5.75E-03
40	GO:0045892: negative regulation of transcription, DNA-templated	6.15E-03
41	GO:0007034: vacuolar transport	6.25E-03
42	GO:0009887: animal organ morphogenesis	6.25E-03
43	GO:0006302: double-strand break repair	6.25E-03
44	GO:0010020: chloroplast fission	6.25E-03
45	GO:0090351: seedling development	6.77E-03
46	GO:0009740: gibberellic acid mediated signaling pathway	7.17E-03
47	GO:0006863: purine nucleobase transport	7.30E-03
48	GO:0016042: lipid catabolic process	7.58E-03
49	GO:0019953: sexual reproduction	8.40E-03
50	GO:0051321: meiotic cell cycle	8.97E-03
51	GO:0006351: transcription, DNA-templated	9.30E-03
52	GO:0010082: regulation of root meristem growth	1.02E-02
53	GO:0010091: trichome branching	1.08E-02
54	GO:0042127: regulation of cell proliferation	1.08E-02
55	GO:0048443: stamen development	1.08E-02
56	GO:0000271: polysaccharide biosynthetic process	1.20E-02
57	GO:0000413: protein peptidyl-prolyl isomerization	1.20E-02
58	GO:0009958: positive gravitropism	1.27E-02
59	GO:0045489: pectin biosynthetic process	1.27E-02
60	GO:0007018: microtubule-based movement	1.34E-02
61	GO:0007059: chromosome segregation	1.34E-02
62	GO:0048825: cotyledon development	1.41E-02
63	GO:0009908: flower development	1.43E-02
64	GO:0071554: cell wall organization or biogenesis	1.47E-02
65	GO:0006470: protein dephosphorylation	1.51E-02
66	GO:0032502: developmental process	1.55E-02
67	GO:0030163: protein catabolic process	1.62E-02
68	GO:0010090: trichome morphogenesis	1.62E-02
69	GO:0009416: response to light stimulus	1.63E-02
70	GO:0009828: plant-type cell wall loosening	1.69E-02
71	GO:0019760: glucosinolate metabolic process	1.69E-02
72	GO:0000910: cytokinesis	1.84E-02
73	GO:0010027: thylakoid membrane organization	1.92E-02
74	GO:0016126: sterol biosynthetic process	1.92E-02
75	GO:0016567: protein ubiquitination	1.96E-02
76	GO:0009826: unidimensional cell growth	1.97E-02
77	GO:0009658: chloroplast organization	2.05E-02
78	GO:0048573: photoperiodism, flowering	2.15E-02
79	GO:0016311: dephosphorylation	2.23E-02
80	GO:0016051: carbohydrate biosynthetic process	2.74E-02
81	GO:0030001: metal ion transport	3.00E-02
82	GO:0006839: mitochondrial transport	3.00E-02
83	GO:0045454: cell redox homeostasis	3.04E-02
84	GO:0009793: embryo development ending in seed dormancy	3.78E-02
85	GO:0006468: protein phosphorylation	3.78E-02
86	GO:0048364: root development	3.90E-02
87	GO:0009736: cytokinin-activated signaling pathway	4.05E-02

Rank	GO Term	Adjusted P value
1	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
2	GO:0009899: ent-kaurene synthase activity	0.00E+00
3	GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity	0.00E+00
4	GO:0009055: electron carrier activity	3.36E-04
5	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	3.42E-04
6	GO:0008408: 3'-5' exonuclease activity	6.67E-04
7	GO:0045544: gibberellin 20-oxidase activity	8.03E-04
8	GO:0003916: DNA topoisomerase activity	8.03E-04
9	GO:0010011: auxin binding	1.06E-03
10	GO:0016853: isomerase activity	1.15E-03
11	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	3.08E-03
12	GO:0052689: carboxylic ester hydrolase activity	5.44E-03
13	GO:0016298: lipase activity	5.54E-03
14	GO:0003725: double-stranded RNA binding	5.75E-03
15	GO:0003777: microtubule motor activity	5.92E-03
16	GO:0042803: protein homodimerization activity	6.39E-03
17	GO:0003712: transcription cofactor activity	6.77E-03
18	GO:0004190: aspartic-type endopeptidase activity	6.77E-03
19	GO:0004722: protein serine/threonine phosphatase activity	6.77E-03
20	GO:0015035: protein disulfide oxidoreductase activity	7.84E-03
21	GO:0005345: purine nucleobase transmembrane transporter activity	8.40E-03
22	GO:0008094: DNA-dependent ATPase activity	8.97E-03
23	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	9.56E-03
24	GO:0004527: exonuclease activity	1.27E-02
25	GO:0001085: RNA polymerase II transcription factor binding	1.27E-02
26	GO:0016887: ATPase activity	1.37E-02
27	GO:0004518: nuclease activity	1.55E-02
28	GO:0046983: protein dimerization activity	1.68E-02
29	GO:0016791: phosphatase activity	1.69E-02
30	GO:0016413: O-acetyltransferase activity	1.84E-02
31	GO:0004672: protein kinase activity	1.94E-02
32	GO:0016788: hydrolase activity, acting on ester bonds	2.09E-02
33	GO:0005096: GTPase activator activity	2.40E-02
34	GO:0005507: copper ion binding	2.54E-02
35	GO:0030145: manganese ion binding	2.56E-02
36	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.56E-02
37	GO:0003697: single-stranded DNA binding	2.74E-02
38	GO:0004871: signal transducer activity	3.18E-02
39	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.38E-02
40	GO:0043621: protein self-association	3.47E-02
41	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.66E-02
42	GO:0004519: endonuclease activity	4.06E-02
43	GO:0004674: protein serine/threonine kinase activity	4.36E-02
44	GO:0005515: protein binding	4.37E-02
45	GO:0046872: metal ion binding	4.53E-02
46	GO:0043565: sequence-specific DNA binding	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0000791: euchromatin	1.50E-04
3	GO:0031357: integral component of chloroplast inner membrane	3.42E-04
4	GO:0030870: Mre11 complex	3.42E-04
5	GO:0008287: protein serine/threonine phosphatase complex	5.61E-04
6	GO:0009531: secondary cell wall	8.03E-04
7	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	1.06E-03
8	GO:0031897: Tic complex	1.06E-03
9	GO:0000795: synaptonemal complex	1.35E-03
10	GO:0000815: ESCRT III complex	1.98E-03
11	GO:0009536: plastid	4.06E-03
12	GO:0005886: plasma membrane	4.99E-03
13	GO:0009508: plastid chromosome	5.75E-03
14	GO:0005875: microtubule associated complex	7.30E-03
15	GO:0009532: plastid stroma	8.97E-03
16	GO:0005871: kinesin complex	1.14E-02
17	GO:0000785: chromatin	1.55E-02
18	GO:0046658: anchored component of plasma membrane	1.75E-02
19	GO:0009295: nucleoid	1.76E-02
20	GO:0005667: transcription factor complex	2.07E-02
21	GO:0005874: microtubule	2.45E-02
22	GO:0031225: anchored component of membrane	2.85E-02
23	GO:0009941: chloroplast envelope	4.04E-02