co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G43010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006511: ubiquitin-dependent protein catabolic process	3.50E-07
2	GO:0010265: SCF complex assembly	2.30E-05
3	GO:0048455: stamen formation	2.30E-05
4	GO:0009651: response to salt stress	3.63E-05
5	GO:0030433: ubiquitin-dependent ERAD pathway	5.66E-05
6	GO:2000072: regulation of defense response to fungus, incompatible interaction	5.89E-05
7	GO:0051788: response to misfolded protein	5.89E-05
8	GO:0010498: proteasomal protein catabolic process	1.04E-04
9	GO:0030163: protein catabolic process	1.31E-04
10	GO:0009793: embryo development ending in seed dormancy	1.37E-04
11	GO:0002679: respiratory burst involved in defense response	1.55E-04
12	GO:0010255: glucose mediated signaling pathway	1.55E-04
13	GO:0033356: UDP-L-arabinose metabolic process	2.12E-04
14	GO:0048767: root hair elongation	2.37E-04
15	GO:0009867: jasmonic acid mediated signaling pathway	2.87E-04
16	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	3.37E-04
17	GO:0043248: proteasome assembly	3.37E-04
18	GO:0042176: regulation of protein catabolic process	3.37E-04
19	GO:0048528: post-embryonic root development	4.74E-04
20	GO:0046686: response to cadmium ion	4.94E-04
21	GO:0050821: protein stabilization	5.46E-04
22	GO:0048766: root hair initiation	5.46E-04
23	GO:0009932: cell tip growth	6.21E-04
24	GO:0009553: embryo sac development	6.76E-04
25	GO:0006098: pentose-phosphate shunt	6.98E-04
26	GO:0043067: regulation of programmed cell death	7.77E-04
27	GO:0048765: root hair cell differentiation	9.42E-04
28	GO:0046856: phosphatidylinositol dephosphorylation	9.42E-04
29	GO:0006790: sulfur compound metabolic process	1.03E-03
30	GO:0006094: gluconeogenesis	1.12E-03
31	GO:0046854: phosphatidylinositol phosphorylation	1.30E-03
32	GO:0010053: root epidermal cell differentiation	1.30E-03
33	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.30E-03
34	GO:0034976: response to endoplasmic reticulum stress	1.39E-03
35	GO:0000027: ribosomal large subunit assembly	1.49E-03
36	GO:0010187: negative regulation of seed germination	1.49E-03
37	GO:0010431: seed maturation	1.70E-03
38	GO:0080092: regulation of pollen tube growth	1.80E-03
39	GO:0048366: leaf development	2.09E-03
40	GO:0010087: phloem or xylem histogenesis	2.24E-03
41	GO:0010154: fruit development	2.36E-03
42	GO:0042752: regulation of circadian rhythm	2.48E-03
43	GO:0010183: pollen tube guidance	2.60E-03
44	GO:0045454: cell redox homeostasis	2.62E-03
45	GO:0009408: response to heat	3.21E-03
46	GO:0016579: protein deubiquitination	3.35E-03
47	GO:0010029: regulation of seed germination	3.62E-03
48	GO:0009816: defense response to bacterium, incompatible interaction	3.62E-03
49	GO:0006974: cellular response to DNA damage stimulus	3.75E-03
50	GO:0009817: defense response to fungus, incompatible interaction	4.17E-03
51	GO:0030244: cellulose biosynthetic process	4.17E-03
52	GO:0009832: plant-type cell wall biogenesis	4.32E-03
53	GO:0009734: auxin-activated signaling pathway	4.51E-03
54	GO:0010043: response to zinc ion	4.60E-03
55	GO:0045087: innate immune response	4.90E-03
56	GO:0009735: response to cytokinin	5.19E-03
57	GO:0006839: mitochondrial transport	5.36E-03
58	GO:0009555: pollen development	5.67E-03
59	GO:0009744: response to sucrose	5.84E-03
60	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	6.66E-03
61	GO:0042538: hyperosmotic salinity response	6.83E-03
62	GO:0051603: proteolysis involved in cellular protein catabolic process	7.35E-03
63	GO:0006096: glycolytic process	8.06E-03
64	GO:0043086: negative regulation of catalytic activity	8.06E-03
65	GO:0048316: seed development	8.24E-03
66	GO:0009626: plant-type hypersensitive response	8.42E-03
67	GO:0009790: embryo development	1.20E-02
68	GO:0009733: response to auxin	1.29E-02
69	GO:0010150: leaf senescence	1.35E-02
70	GO:0006470: protein dephosphorylation	1.48E-02
71	GO:0009860: pollen tube growth	1.94E-02
72	GO:0007049: cell cycle	1.99E-02
73	GO:0080167: response to karrikin	2.14E-02
74	GO:0046777: protein autophosphorylation	2.25E-02
75	GO:0009737: response to abscisic acid	2.46E-02
76	GO:0009753: response to jasmonic acid	2.97E-02
77	GO:0009873: ethylene-activated signaling pathway	3.39E-02
78	GO:0009738: abscisic acid-activated signaling pathway	4.15E-02

Rank	GO Term	Adjusted P value
1	GO:0031593: polyubiquitin binding	1.99E-06
2	GO:0051879: Hsp90 protein binding	5.89E-05
3	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.04E-04
4	GO:0001653: peptide receptor activity	1.55E-04
5	GO:0005515: protein binding	2.64E-04
6	GO:0036402: proteasome-activating ATPase activity	3.37E-04
7	GO:0004332: fructose-bisphosphate aldolase activity	3.37E-04
8	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	4.04E-04
9	GO:0030234: enzyme regulator activity	8.59E-04
10	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.12E-03
11	GO:0004190: aspartic-type endopeptidase activity	1.30E-03
12	GO:0017025: TBP-class protein binding	1.30E-03
13	GO:0043130: ubiquitin binding	1.49E-03
14	GO:0043424: protein histidine kinase binding	1.59E-03
15	GO:0004298: threonine-type endopeptidase activity	1.70E-03
16	GO:0003756: protein disulfide isomerase activity	2.02E-03
17	GO:0047134: protein-disulfide reductase activity	2.13E-03
18	GO:0004791: thioredoxin-disulfide reductase activity	2.48E-03
19	GO:0004843: thiol-dependent ubiquitin-specific protease activity	2.72E-03
20	GO:0004722: protein serine/threonine phosphatase activity	2.87E-03
21	GO:0016887: ATPase activity	4.95E-03
22	GO:0003993: acid phosphatase activity	5.05E-03
23	GO:0031625: ubiquitin protein ligase binding	7.70E-03
24	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.09E-02
25	GO:0046910: pectinesterase inhibitor activity	1.28E-02
26	GO:0000287: magnesium ion binding	1.81E-02
27	GO:0008233: peptidase activity	2.11E-02
28	GO:0004497: monooxygenase activity	2.14E-02
29	GO:0061630: ubiquitin protein ligase activity	2.22E-02
30	GO:0016787: hydrolase activity	2.47E-02
31	GO:0005524: ATP binding	2.88E-02
32	GO:0008289: lipid binding	3.58E-02
33	GO:0000166: nucleotide binding	4.25E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0000502: proteasome complex	4.46E-09
3	GO:0005829: cytosol	4.62E-07
4	GO:0031595: nuclear proteasome complex	4.09E-06
5	GO:0008540: proteasome regulatory particle, base subcomplex	1.14E-05
6	GO:0008541: proteasome regulatory particle, lid subcomplex	1.68E-05
7	GO:0031461: cullin-RING ubiquitin ligase complex	1.55E-04
8	GO:0031597: cytosolic proteasome complex	4.04E-04
9	GO:0000794: condensed nuclear chromosome	4.74E-04
10	GO:0000326: protein storage vacuole	6.21E-04
11	GO:0005740: mitochondrial envelope	8.59E-04
12	GO:0031307: integral component of mitochondrial outer membrane	1.03E-03
13	GO:0005839: proteasome core complex	1.70E-03
14	GO:0005741: mitochondrial outer membrane	1.70E-03
15	GO:0016592: mediator complex	2.84E-03
16	GO:0009506: plasmodesma	3.22E-03
17	GO:0005788: endoplasmic reticulum lumen	3.62E-03
18	GO:0019005: SCF ubiquitin ligase complex	4.17E-03
19	GO:0000151: ubiquitin ligase complex	4.17E-03
20	GO:0005783: endoplasmic reticulum	4.75E-03
21	GO:0005819: spindle	5.21E-03
22	GO:0031966: mitochondrial membrane	6.83E-03
23	GO:0005774: vacuolar membrane	8.36E-03
24	GO:0009524: phragmoplast	1.11E-02
25	GO:0005789: endoplasmic reticulum membrane	1.76E-02
26	GO:0005730: nucleolus	1.95E-02
27	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.96E-02
28	GO:0005743: mitochondrial inner membrane	2.68E-02
29	GO:0016020: membrane	3.55E-02
30	GO:0022626: cytosolic ribosome	4.12E-02
31	GO:0048046: apoplast	4.18E-02
32	GO:0005737: cytoplasm	4.67E-02
33	GO:0009579: thylakoid	4.83E-02