GO Enrichment Analysis of Co-expressed Genes with
AT5G42990
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 2 | GO:0006511: ubiquitin-dependent protein catabolic process | 5.93E-11 |
| 3 | GO:0018279: protein N-linked glycosylation via asparagine | 2.26E-06 |
| 4 | GO:0080120: CAAX-box protein maturation | 3.25E-05 |
| 5 | GO:0071586: CAAX-box protein processing | 3.25E-05 |
| 6 | GO:0043687: post-translational protein modification | 3.25E-05 |
| 7 | GO:0051788: response to misfolded protein | 8.18E-05 |
| 8 | GO:0010498: proteasomal protein catabolic process | 1.42E-04 |
| 9 | GO:0009647: skotomorphogenesis | 2.11E-04 |
| 10 | GO:0010255: glucose mediated signaling pathway | 2.11E-04 |
| 11 | GO:0010483: pollen tube reception | 2.85E-04 |
| 12 | GO:0010363: regulation of plant-type hypersensitive response | 2.85E-04 |
| 13 | GO:0047484: regulation of response to osmotic stress | 4.48E-04 |
| 14 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 4.48E-04 |
| 15 | GO:0043248: proteasome assembly | 4.48E-04 |
| 16 | GO:0010189: vitamin E biosynthetic process | 5.36E-04 |
| 17 | GO:0000054: ribosomal subunit export from nucleus | 5.36E-04 |
| 18 | GO:0048528: post-embryonic root development | 6.27E-04 |
| 19 | GO:0031540: regulation of anthocyanin biosynthetic process | 7.22E-04 |
| 20 | GO:0048766: root hair initiation | 7.22E-04 |
| 21 | GO:0051603: proteolysis involved in cellular protein catabolic process | 7.76E-04 |
| 22 | GO:0006526: arginine biosynthetic process | 8.20E-04 |
| 23 | GO:0009932: cell tip growth | 8.20E-04 |
| 24 | GO:0001510: RNA methylation | 8.20E-04 |
| 25 | GO:0046686: response to cadmium ion | 9.64E-04 |
| 26 | GO:0009553: embryo sac development | 1.02E-03 |
| 27 | GO:0048765: root hair cell differentiation | 1.24E-03 |
| 28 | GO:0046856: phosphatidylinositol dephosphorylation | 1.24E-03 |
| 29 | GO:0010053: root epidermal cell differentiation | 1.72E-03 |
| 30 | GO:0034976: response to endoplasmic reticulum stress | 1.85E-03 |
| 31 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.98E-03 |
| 32 | GO:0006487: protein N-linked glycosylation | 1.99E-03 |
| 33 | GO:0010431: seed maturation | 2.26E-03 |
| 34 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.40E-03 |
| 35 | GO:0006606: protein import into nucleus | 3.00E-03 |
| 36 | GO:0048868: pollen tube development | 3.15E-03 |
| 37 | GO:0010154: fruit development | 3.15E-03 |
| 38 | GO:0048825: cotyledon development | 3.47E-03 |
| 39 | GO:0030163: protein catabolic process | 3.97E-03 |
| 40 | GO:0045454: cell redox homeostasis | 4.01E-03 |
| 41 | GO:0009567: double fertilization forming a zygote and endosperm | 4.14E-03 |
| 42 | GO:0016579: protein deubiquitination | 4.49E-03 |
| 43 | GO:0010043: response to zinc ion | 6.19E-03 |
| 44 | GO:0009736: cytokinin-activated signaling pathway | 9.69E-03 |
| 45 | GO:0043086: negative regulation of catalytic activity | 1.09E-02 |
| 46 | GO:0006396: RNA processing | 1.27E-02 |
| 47 | GO:0009651: response to salt stress | 1.40E-02 |
| 48 | GO:0006413: translational initiation | 1.74E-02 |
| 49 | GO:0009409: response to cold | 2.41E-02 |
| 50 | GO:0048366: leaf development | 2.80E-02 |
| 51 | GO:0046777: protein autophosphorylation | 3.05E-02 |
| 52 | GO:0032259: methylation | 3.72E-02 |
| 53 | GO:0009408: response to heat | 3.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 2 | GO:0004298: threonine-type endopeptidase activity | 1.25E-13 |
| 3 | GO:0008233: peptidase activity | 2.59E-08 |
| 4 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 2.26E-06 |
| 5 | GO:0015157: oligosaccharide transmembrane transporter activity | 3.25E-05 |
| 6 | GO:0004175: endopeptidase activity | 4.55E-05 |
| 7 | GO:0018708: thiol S-methyltransferase activity | 8.18E-05 |
| 8 | GO:0004848: ureidoglycolate hydrolase activity | 1.42E-04 |
| 9 | GO:0008253: 5'-nucleotidase activity | 1.42E-04 |
| 10 | GO:0004576: oligosaccharyl transferase activity | 2.85E-04 |
| 11 | GO:0036402: proteasome-activating ATPase activity | 4.48E-04 |
| 12 | GO:0051920: peroxiredoxin activity | 5.36E-04 |
| 13 | GO:0016209: antioxidant activity | 7.22E-04 |
| 14 | GO:0008173: RNA methyltransferase activity | 8.20E-04 |
| 15 | GO:0016887: ATPase activity | 1.06E-03 |
| 16 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 1.13E-03 |
| 17 | GO:0001054: RNA polymerase I activity | 1.24E-03 |
| 18 | GO:0001056: RNA polymerase III activity | 1.36E-03 |
| 19 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.47E-03 |
| 20 | GO:0017025: TBP-class protein binding | 1.72E-03 |
| 21 | GO:0043424: protein histidine kinase binding | 2.12E-03 |
| 22 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 2.26E-03 |
| 23 | GO:0003756: protein disulfide isomerase activity | 2.69E-03 |
| 24 | GO:0016853: isomerase activity | 3.31E-03 |
| 25 | GO:0004197: cysteine-type endopeptidase activity | 3.80E-03 |
| 26 | GO:0008237: metallopeptidase activity | 4.32E-03 |
| 27 | GO:0003924: GTPase activity | 4.94E-03 |
| 28 | GO:0004222: metalloendopeptidase activity | 5.99E-03 |
| 29 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 9.69E-03 |
| 30 | GO:0031625: ubiquitin protein ligase binding | 1.04E-02 |
| 31 | GO:0005524: ATP binding | 1.08E-02 |
| 32 | GO:0008026: ATP-dependent helicase activity | 1.29E-02 |
| 33 | GO:0005525: GTP binding | 1.44E-02 |
| 34 | GO:0046910: pectinesterase inhibitor activity | 1.74E-02 |
| 35 | GO:0003743: translation initiation factor activity | 2.04E-02 |
| 36 | GO:0008168: methyltransferase activity | 2.43E-02 |
| 37 | GO:0000287: magnesium ion binding | 2.46E-02 |
| 38 | GO:0004601: peroxidase activity | 2.50E-02 |
| 39 | GO:0061630: ubiquitin protein ligase activity | 3.02E-02 |
| 40 | GO:0016787: hydrolase activity | 3.81E-02 |
| 41 | GO:0046872: metal ion binding | 3.99E-02 |
| 42 | GO:0003723: RNA binding | 4.04E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 6.68E-19 |
| 2 | GO:0005839: proteasome core complex | 1.25E-13 |
| 3 | GO:0019773: proteasome core complex, alpha-subunit complex | 5.37E-08 |
| 4 | GO:0008250: oligosaccharyltransferase complex | 2.26E-06 |
| 5 | GO:0005783: endoplasmic reticulum | 1.54E-05 |
| 6 | GO:0019774: proteasome core complex, beta-subunit complex | 3.25E-05 |
| 7 | GO:0005774: vacuolar membrane | 1.21E-04 |
| 8 | GO:0005773: vacuole | 3.14E-04 |
| 9 | GO:0031597: cytosolic proteasome complex | 5.36E-04 |
| 10 | GO:0031595: nuclear proteasome complex | 6.27E-04 |
| 11 | GO:0005736: DNA-directed RNA polymerase I complex | 9.20E-04 |
| 12 | GO:0005666: DNA-directed RNA polymerase III complex | 1.02E-03 |
| 13 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.02E-03 |
| 14 | GO:0048471: perinuclear region of cytoplasm | 1.24E-03 |
| 15 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.24E-03 |
| 16 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.72E-03 |
| 17 | GO:0005829: cytosol | 4.75E-03 |
| 18 | GO:0031966: mitochondrial membrane | 9.22E-03 |
| 19 | GO:0005635: nuclear envelope | 1.02E-02 |
| 20 | GO:0009706: chloroplast inner membrane | 1.24E-02 |
| 21 | GO:0005623: cell | 1.48E-02 |
| 22 | GO:0048046: apoplast | 1.55E-02 |
| 23 | GO:0005622: intracellular | 1.56E-02 |
| 24 | GO:0005886: plasma membrane | 1.69E-02 |
| 25 | GO:0009941: chloroplast envelope | 2.15E-02 |
| 26 | GO:0016020: membrane | 2.91E-02 |
| 27 | GO:0031969: chloroplast membrane | 2.91E-02 |
| 28 | GO:0005730: nucleolus | 3.01E-02 |