Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G42620

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035563: positive regulation of chromatin binding0.00E+00
2GO:0060966: regulation of gene silencing by RNA0.00E+00
3GO:0070829: heterochromatin maintenance0.00E+00
4GO:0071360: cellular response to exogenous dsRNA0.00E+00
5GO:1900370: positive regulation of RNA interference0.00E+00
6GO:1900368: regulation of RNA interference1.54E-06
7GO:0010069: zygote asymmetric cytokinesis in embryo sac4.37E-06
8GO:0097054: L-glutamate biosynthetic process4.37E-06
9GO:1900111: positive regulation of histone H3-K9 dimethylation4.37E-06
10GO:0010424: DNA methylation on cytosine within a CG sequence4.37E-06
11GO:0060968: regulation of gene silencing8.33E-06
12GO:0032776: DNA methylation on cytosine8.33E-06
13GO:0006537: glutamate biosynthetic process1.33E-05
14GO:0060964: regulation of gene silencing by miRNA1.33E-05
15GO:0019676: ammonia assimilation cycle1.91E-05
16GO:0006826: iron ion transport4.94E-05
17GO:0006880: intracellular sequestering of iron ion4.94E-05
18GO:0070413: trehalose metabolism in response to stress5.85E-05
19GO:0048589: developmental growth7.81E-05
20GO:0006349: regulation of gene expression by genetic imprinting8.84E-05
21GO:0030422: production of siRNA involved in RNA interference9.94E-05
22GO:0006879: cellular iron ion homeostasis1.11E-04
23GO:0010216: maintenance of DNA methylation1.11E-04
24GO:0080188: RNA-directed DNA methylation1.59E-04
25GO:0010039: response to iron ion1.59E-04
26GO:0005992: trehalose biosynthetic process1.85E-04
27GO:0006306: DNA methylation2.11E-04
28GO:0009735: response to cytokinin2.15E-04
29GO:0009294: DNA mediated transformation2.39E-04
30GO:0055072: iron ion homeostasis3.27E-04
31GO:0000302: response to reactive oxygen species3.42E-04
32GO:0042128: nitrate assimilation4.69E-04
33GO:0016311: dephosphorylation5.02E-04
34GO:0010043: response to zinc ion5.70E-04
35GO:0009910: negative regulation of flower development5.70E-04
36GO:0042542: response to hydrogen peroxide6.94E-04
37GO:0006417: regulation of translation9.20E-04
38GO:0016569: covalent chromatin modification1.04E-03
39GO:0010468: regulation of gene expression1.73E-03
40GO:0009617: response to bacterium1.73E-03
41GO:0048366: leaf development2.30E-03
42GO:0015979: photosynthesis2.60E-03
43GO:0009908: flower development4.26E-03
44GO:0035556: intracellular signal transduction4.74E-03
45GO:0009409: response to cold9.20E-03
46GO:0046686: response to cadmium ion1.01E-02
47GO:0007165: signal transduction1.25E-02
48GO:0055114: oxidation-reduction process1.36E-02
49GO:0050832: defense response to fungus1.60E-02
RankGO TermAdjusted P value
1GO:0016040: glutamate synthase (NADH) activity0.00E+00
2GO:0008199: ferric iron binding1.33E-05
3GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity1.33E-05
4GO:0004322: ferroxidase activity1.33E-05
5GO:0051538: 3 iron, 4 sulfur cluster binding2.57E-05
6GO:0003886: DNA (cytosine-5-)-methyltransferase activity4.09E-05
7GO:0004805: trehalose-phosphatase activity9.94E-05
8GO:0004707: MAP kinase activity2.11E-04
9GO:0010181: FMN binding3.11E-04
10GO:0005506: iron ion binding4.68E-04
11GO:0003993: acid phosphatase activity6.22E-04
12GO:0004386: helicase activity1.14E-03
13GO:0008168: methyltransferase activity2.01E-03
14GO:0003682: chromatin binding2.14E-03
15GO:0050660: flavin adenine dinucleotide binding2.27E-03
16GO:0004722: protein serine/threonine phosphatase activity2.86E-03
17GO:0003729: mRNA binding9.83E-03
18GO:0016757: transferase activity, transferring glycosyl groups1.77E-02
19GO:0003676: nucleic acid binding2.02E-02
20GO:0003677: DNA binding2.84E-02
21GO:0003723: RNA binding3.20E-02
22GO:0005524: ATP binding3.73E-02
23GO:0005515: protein binding4.98E-02
RankGO TermAdjusted P value
1GO:0090577: RNA polymerase IV transcription factor complex0.00E+00
2GO:0031618: nuclear pericentric heterochromatin0.00E+00
3GO:0000419: DNA-directed RNA polymerase V complex1.71E-04
4GO:0009570: chloroplast stroma2.90E-03
5GO:0009579: thylakoid5.17E-03
6GO:0009536: plastid8.58E-03
7GO:0009535: chloroplast thylakoid membrane1.31E-02
8GO:0005773: vacuole2.43E-02
9GO:0005739: mitochondrion3.06E-02
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Gene type



Gene DE type