co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G42570

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
2	GO:0052386: cell wall thickening	0.00E+00
3	GO:0043619: regulation of transcription from RNA polymerase II promoter in response to oxidative stress	0.00E+00
4	GO:0018063: cytochrome c-heme linkage	0.00E+00
5	GO:2000068: regulation of defense response to insect	0.00E+00
6	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
7	GO:0006605: protein targeting	3.56E-06
8	GO:0042350: GDP-L-fucose biosynthetic process	2.18E-04
9	GO:1990641: response to iron ion starvation	2.18E-04
10	GO:0019478: D-amino acid catabolic process	2.18E-04
11	GO:0051090: regulation of sequence-specific DNA binding transcription factor activity	2.18E-04
12	GO:0006680: glucosylceramide catabolic process	2.18E-04
13	GO:0015031: protein transport	2.65E-04
14	GO:0051607: defense response to virus	3.21E-04
15	GO:0008202: steroid metabolic process	3.36E-04
16	GO:0009816: defense response to bacterium, incompatible interaction	3.73E-04
17	GO:0042853: L-alanine catabolic process	4.86E-04
18	GO:0006101: citrate metabolic process	4.86E-04
19	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.86E-04
20	GO:0010155: regulation of proton transport	4.86E-04
21	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.86E-04
22	GO:0006568: tryptophan metabolic process	4.86E-04
23	GO:0080163: regulation of protein serine/threonine phosphatase activity	7.90E-04
24	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	7.90E-04
25	GO:0071398: cellular response to fatty acid	7.90E-04
26	GO:0032504: multicellular organism reproduction	7.90E-04
27	GO:0010476: gibberellin mediated signaling pathway	7.90E-04
28	GO:0010325: raffinose family oligosaccharide biosynthetic process	7.90E-04
29	GO:0009410: response to xenobiotic stimulus	7.90E-04
30	GO:0006631: fatty acid metabolic process	8.21E-04
31	GO:0051707: response to other organism	9.07E-04
32	GO:0070301: cellular response to hydrogen peroxide	1.13E-03
33	GO:0051639: actin filament network formation	1.13E-03
34	GO:0009963: positive regulation of flavonoid biosynthetic process	1.13E-03
35	GO:0009226: nucleotide-sugar biosynthetic process	1.13E-03
36	GO:0071323: cellular response to chitin	1.13E-03
37	GO:0071786: endoplasmic reticulum tubular network organization	1.13E-03
38	GO:0080024: indolebutyric acid metabolic process	1.13E-03
39	GO:0055070: copper ion homeostasis	1.13E-03
40	GO:0001676: long-chain fatty acid metabolic process	1.13E-03
41	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.13E-03
42	GO:0051764: actin crosslink formation	1.50E-03
43	GO:1902584: positive regulation of response to water deprivation	1.50E-03
44	GO:0006621: protein retention in ER lumen	1.50E-03
45	GO:0015867: ATP transport	1.50E-03
46	GO:1901002: positive regulation of response to salt stress	1.50E-03
47	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.50E-03
48	GO:0009620: response to fungus	1.83E-03
49	GO:0045927: positive regulation of growth	1.91E-03
50	GO:0006097: glyoxylate cycle	1.91E-03
51	GO:0009229: thiamine diphosphate biosynthetic process	1.91E-03
52	GO:0009738: abscisic acid-activated signaling pathway	1.98E-03
53	GO:0016192: vesicle-mediated transport	2.09E-03
54	GO:0009228: thiamine biosynthetic process	2.35E-03
55	GO:0033365: protein localization to organelle	2.35E-03
56	GO:0009759: indole glucosinolate biosynthetic process	2.35E-03
57	GO:0015866: ADP transport	2.35E-03
58	GO:0010256: endomembrane system organization	2.35E-03
59	GO:0006886: intracellular protein transport	2.67E-03
60	GO:0030643: cellular phosphate ion homeostasis	2.83E-03
61	GO:0034389: lipid particle organization	2.83E-03
62	GO:0048444: floral organ morphogenesis	2.83E-03
63	GO:0080186: developmental vegetative growth	3.33E-03
64	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.33E-03
65	GO:1902074: response to salt	3.33E-03
66	GO:0010044: response to aluminum ion	3.33E-03
67	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.86E-03
68	GO:0006102: isocitrate metabolic process	3.86E-03
69	GO:0016311: dephosphorylation	3.92E-03
70	GO:0010417: glucuronoxylan biosynthetic process	4.42E-03
71	GO:0030968: endoplasmic reticulum unfolded protein response	4.42E-03
72	GO:0017004: cytochrome complex assembly	4.42E-03
73	GO:0007338: single fertilization	5.00E-03
74	GO:0010112: regulation of systemic acquired resistance	5.00E-03
75	GO:0009056: catabolic process	5.00E-03
76	GO:0015780: nucleotide-sugar transport	5.00E-03
77	GO:0009835: fruit ripening	5.00E-03
78	GO:0009617: response to bacterium	5.13E-03
79	GO:0006099: tricarboxylic acid cycle	5.46E-03
80	GO:0009086: methionine biosynthetic process	5.62E-03
81	GO:0042742: defense response to bacterium	7.21E-03
82	GO:0009636: response to toxic substance	7.56E-03
83	GO:0045037: protein import into chloroplast stroma	7.60E-03
84	GO:0000266: mitochondrial fission	7.60E-03
85	GO:0010102: lateral root morphogenesis	8.30E-03
86	GO:0030036: actin cytoskeleton organization	8.30E-03
87	GO:0090351: seedling development	9.79E-03
88	GO:0000162: tryptophan biosynthetic process	1.06E-02
89	GO:0009863: salicylic acid mediated signaling pathway	1.14E-02
90	GO:0030150: protein import into mitochondrial matrix	1.14E-02
91	GO:0051017: actin filament bundle assembly	1.14E-02
92	GO:0006457: protein folding	1.24E-02
93	GO:0019915: lipid storage	1.30E-02
94	GO:0009269: response to desiccation	1.30E-02
95	GO:0009814: defense response, incompatible interaction	1.39E-02
96	GO:0030433: ubiquitin-dependent ERAD pathway	1.39E-02
97	GO:0031348: negative regulation of defense response	1.39E-02
98	GO:0009693: ethylene biosynthetic process	1.48E-02
99	GO:0009411: response to UV	1.48E-02
100	GO:0010051: xylem and phloem pattern formation	1.75E-02
101	GO:0045489: pectin biosynthetic process	1.85E-02
102	GO:0006623: protein targeting to vacuole	2.05E-02
103	GO:0071554: cell wall organization or biogenesis	2.15E-02
104	GO:0010193: response to ozone	2.15E-02
105	GO:0000302: response to reactive oxygen species	2.15E-02
106	GO:0006891: intra-Golgi vesicle-mediated transport	2.15E-02
107	GO:0006635: fatty acid beta-oxidation	2.15E-02
108	GO:0016032: viral process	2.25E-02
109	GO:0010150: leaf senescence	2.25E-02
110	GO:0007275: multicellular organism development	2.31E-02
111	GO:0006464: cellular protein modification process	2.46E-02
112	GO:0009567: double fertilization forming a zygote and endosperm	2.46E-02
113	GO:0006470: protein dephosphorylation	2.57E-02
114	GO:0007166: cell surface receptor signaling pathway	2.57E-02
115	GO:0009737: response to abscisic acid	2.64E-02
116	GO:0001666: response to hypoxia	2.79E-02
117	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.91E-02
118	GO:0010029: regulation of seed germination	2.91E-02
119	GO:0009607: response to biotic stimulus	2.91E-02
120	GO:0006906: vesicle fusion	3.02E-02
121	GO:0009817: defense response to fungus, incompatible interaction	3.37E-02
122	GO:0008219: cell death	3.37E-02
123	GO:0048767: root hair elongation	3.49E-02
124	GO:0010043: response to zinc ion	3.74E-02
125	GO:0009867: jasmonic acid mediated signaling pathway	3.99E-02
126	GO:0045087: innate immune response	3.99E-02
127	GO:0016051: carbohydrate biosynthetic process	3.99E-02
128	GO:0006839: mitochondrial transport	4.38E-02
129	GO:0006887: exocytosis	4.51E-02
130	GO:0042542: response to hydrogen peroxide	4.65E-02
131	GO:0010114: response to red light	4.78E-02
132	GO:0000209: protein polyubiquitination	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
2	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
3	GO:0050334: thiaminase activity	0.00E+00
4	GO:0005046: KDEL sequence binding	0.00E+00
5	GO:0051499: D-aminoacyl-tRNA deacylase activity	0.00E+00
6	GO:0034338: short-chain carboxylesterase activity	0.00E+00
7	GO:0102391: decanoate--CoA ligase activity	1.11E-04
8	GO:0008320: protein transmembrane transporter activity	1.47E-04
9	GO:0004467: long-chain fatty acid-CoA ligase activity	1.47E-04
10	GO:0030942: endoplasmic reticulum signal peptide binding	2.18E-04
11	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	2.18E-04
12	GO:0004348: glucosylceramidase activity	2.18E-04
13	GO:0047150: betaine-homocysteine S-methyltransferase activity	2.18E-04
14	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.18E-04
15	GO:0050577: GDP-L-fucose synthase activity	2.18E-04
16	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.33E-04
17	GO:0008142: oxysterol binding	2.33E-04
18	GO:0004630: phospholipase D activity	2.33E-04
19	GO:0030247: polysaccharide binding	4.29E-04
20	GO:0000774: adenyl-nucleotide exchange factor activity	4.86E-04
21	GO:0032934: sterol binding	4.86E-04
22	GO:0050736: O-malonyltransferase activity	4.86E-04
23	GO:0015036: disulfide oxidoreductase activity	4.86E-04
24	GO:0010331: gibberellin binding	4.86E-04
25	GO:0003994: aconitate hydratase activity	4.86E-04
26	GO:0031418: L-ascorbic acid binding	9.15E-04
27	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.13E-03
28	GO:0035529: NADH pyrophosphatase activity	1.13E-03
29	GO:0005460: UDP-glucose transmembrane transporter activity	1.13E-03
30	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.13E-03
31	GO:0046923: ER retention sequence binding	1.50E-03
32	GO:0004834: tryptophan synthase activity	1.50E-03
33	GO:0005459: UDP-galactose transmembrane transporter activity	1.91E-03
34	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.91E-03
35	GO:0004623: phospholipase A2 activity	1.91E-03
36	GO:0047631: ADP-ribose diphosphatase activity	1.91E-03
37	GO:0000210: NAD+ diphosphatase activity	2.35E-03
38	GO:0005347: ATP transmembrane transporter activity	2.83E-03
39	GO:0004656: procollagen-proline 4-dioxygenase activity	2.83E-03
40	GO:0015217: ADP transmembrane transporter activity	2.83E-03
41	GO:0004722: protein serine/threonine phosphatase activity	2.93E-03
42	GO:0004806: triglyceride lipase activity	3.72E-03
43	GO:0008312: 7S RNA binding	3.86E-03
44	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.86E-03
45	GO:0052747: sinapyl alcohol dehydrogenase activity	3.86E-03
46	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	5.00E-03
47	GO:0003993: acid phosphatase activity	5.46E-03
48	GO:0045309: protein phosphorylated amino acid binding	5.62E-03
49	GO:0004864: protein phosphatase inhibitor activity	6.25E-03
50	GO:0030234: enzyme regulator activity	6.25E-03
51	GO:0019904: protein domain specific binding	6.91E-03
52	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.60E-03
53	GO:0031072: heat shock protein binding	8.30E-03
54	GO:0008061: chitin binding	9.79E-03
55	GO:0003712: transcription cofactor activity	9.79E-03
56	GO:0051087: chaperone binding	1.22E-02
57	GO:0042803: protein homodimerization activity	1.25E-02
58	GO:0051082: unfolded protein binding	1.30E-02
59	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.39E-02
60	GO:0008810: cellulase activity	1.48E-02
61	GO:0005102: receptor binding	1.66E-02
62	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.67E-02
63	GO:0030170: pyridoxal phosphate binding	1.80E-02
64	GO:0005524: ATP binding	1.92E-02
65	GO:0050662: coenzyme binding	1.95E-02
66	GO:0008565: protein transporter activity	1.95E-02
67	GO:0016853: isomerase activity	1.95E-02
68	GO:0004872: receptor activity	2.05E-02
69	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.09E-02
70	GO:0005509: calcium ion binding	2.14E-02
71	GO:0051015: actin filament binding	2.36E-02
72	GO:0016791: phosphatase activity	2.46E-02
73	GO:0016787: hydrolase activity	2.67E-02
74	GO:0046872: metal ion binding	2.68E-02
75	GO:0016413: O-acetyltransferase activity	2.68E-02
76	GO:0016887: ATPase activity	2.68E-02
77	GO:0005515: protein binding	3.14E-02
78	GO:0004842: ubiquitin-protein transferase activity	3.87E-02
79	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.99E-02
80	GO:0003746: translation elongation factor activity	3.99E-02
81	GO:0000149: SNARE binding	4.25E-02
82	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.25E-02
83	GO:0051539: 4 iron, 4 sulfur cluster binding	4.38E-02
84	GO:0005484: SNAP receptor activity	4.78E-02
85	GO:0005507: copper ion binding	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0005789: endoplasmic reticulum membrane	4.63E-10
2	GO:0005794: Golgi apparatus	3.38E-07
3	GO:0005783: endoplasmic reticulum	3.02E-05
4	GO:0005801: cis-Golgi network	1.11E-04
5	GO:0001405: presequence translocase-associated import motor	2.18E-04
6	GO:0045252: oxoglutarate dehydrogenase complex	2.18E-04
7	GO:0009506: plasmodesma	4.48E-04
8	GO:0031314: extrinsic component of mitochondrial inner membrane	4.86E-04
9	GO:0030134: ER to Golgi transport vesicle	4.86E-04
10	GO:0016021: integral component of membrane	5.07E-04
11	GO:0031902: late endosome membrane	8.21E-04
12	GO:0032432: actin filament bundle	1.13E-03
13	GO:0030658: transport vesicle membrane	1.13E-03
14	GO:0071782: endoplasmic reticulum tubular network	1.13E-03
15	GO:0000164: protein phosphatase type 1 complex	1.91E-03
16	GO:0005623: cell	2.82E-03
17	GO:0005743: mitochondrial inner membrane	3.14E-03
18	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.33E-03
19	GO:0009986: cell surface	3.33E-03
20	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.86E-03
21	GO:0005779: integral component of peroxisomal membrane	4.42E-03
22	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	4.42E-03
23	GO:0005811: lipid particle	4.42E-03
24	GO:0005829: cytosol	5.13E-03
25	GO:0030665: clathrin-coated vesicle membrane	5.62E-03
26	GO:0005886: plasma membrane	5.83E-03
27	GO:0046658: anchored component of plasma membrane	5.86E-03
28	GO:0017119: Golgi transport complex	6.25E-03
29	GO:0005884: actin filament	6.91E-03
30	GO:0030176: integral component of endoplasmic reticulum membrane	9.79E-03
31	GO:0005795: Golgi stack	9.79E-03
32	GO:0005741: mitochondrial outer membrane	1.30E-02
33	GO:0031410: cytoplasmic vesicle	1.39E-02
34	GO:0005622: intracellular	1.99E-02
35	GO:0019898: extrinsic component of membrane	2.05E-02
36	GO:0005774: vacuolar membrane	2.30E-02
37	GO:0032580: Golgi cisterna membrane	2.46E-02
38	GO:0000151: ubiquitin ligase complex	3.37E-02
39	GO:0000325: plant-type vacuole	3.74E-02
40	GO:0005777: peroxisome	3.76E-02
41	GO:0031201: SNARE complex	4.51E-02