co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G42310

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046460: neutral lipid biosynthetic process	0.00E+00
2	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
3	GO:0033528: S-methylmethionine cycle	0.00E+00
4	GO:0006114: glycerol biosynthetic process	0.00E+00
5	GO:0051322: anaphase	7.45E-06
6	GO:0045010: actin nucleation	4.79E-05
7	GO:0048657: anther wall tapetum cell differentiation	8.96E-05
8	GO:0000012: single strand break repair	8.96E-05
9	GO:0042547: cell wall modification involved in multidimensional cell growth	8.96E-05
10	GO:0043087: regulation of GTPase activity	8.96E-05
11	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	8.96E-05
12	GO:0010207: photosystem II assembly	1.97E-04
13	GO:0043255: regulation of carbohydrate biosynthetic process	2.12E-04
14	GO:0080005: photosystem stoichiometry adjustment	2.12E-04
15	GO:0006435: threonyl-tRNA aminoacylation	2.12E-04
16	GO:0090351: seedling development	2.22E-04
17	GO:0001578: microtubule bundle formation	3.54E-04
18	GO:0010306: rhamnogalacturonan II biosynthetic process	5.10E-04
19	GO:0006168: adenine salvage	5.10E-04
20	GO:0006166: purine ribonucleoside salvage	5.10E-04
21	GO:0046653: tetrahydrofolate metabolic process	5.10E-04
22	GO:0007059: chromosome segregation	5.92E-04
23	GO:0071483: cellular response to blue light	6.78E-04
24	GO:0006552: leucine catabolic process	6.78E-04
25	GO:0007020: microtubule nucleation	6.78E-04
26	GO:0010090: trichome morphogenesis	7.66E-04
27	GO:0046785: microtubule polymerization	8.59E-04
28	GO:0044209: AMP salvage	8.59E-04
29	GO:0006465: signal peptide processing	8.59E-04
30	GO:0000910: cytokinesis	9.10E-04
31	GO:0010337: regulation of salicylic acid metabolic process	1.05E-03
32	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.05E-03
33	GO:0030244: cellulose biosynthetic process	1.24E-03
34	GO:0034389: lipid particle organization	1.25E-03
35	GO:0022904: respiratory electron transport chain	1.46E-03
36	GO:0048528: post-embryonic root development	1.46E-03
37	GO:0009704: de-etiolation	1.69E-03
38	GO:0071482: cellular response to light stimulus	1.93E-03
39	GO:0022900: electron transport chain	1.93E-03
40	GO:0009827: plant-type cell wall modification	1.93E-03
41	GO:0009821: alkaloid biosynthetic process	2.18E-03
42	GO:0090305: nucleic acid phosphodiester bond hydrolysis	2.18E-03
43	GO:0019432: triglyceride biosynthetic process	2.18E-03
44	GO:0009086: methionine biosynthetic process	2.43E-03
45	GO:0006032: chitin catabolic process	2.70E-03
46	GO:0006259: DNA metabolic process	2.70E-03
47	GO:0006265: DNA topological change	2.98E-03
48	GO:0006352: DNA-templated transcription, initiation	2.98E-03
49	GO:0045037: protein import into chloroplast stroma	3.26E-03
50	GO:0009793: embryo development ending in seed dormancy	3.56E-03
51	GO:0030036: actin cytoskeleton organization	3.56E-03
52	GO:0009767: photosynthetic electron transport chain	3.56E-03
53	GO:0006302: double-strand break repair	3.86E-03
54	GO:0010053: root epidermal cell differentiation	4.18E-03
55	GO:0009825: multidimensional cell growth	4.18E-03
56	GO:0010167: response to nitrate	4.18E-03
57	GO:0006071: glycerol metabolic process	4.50E-03
58	GO:0006289: nucleotide-excision repair	4.83E-03
59	GO:0010073: meristem maintenance	5.17E-03
60	GO:0006825: copper ion transport	5.17E-03
61	GO:0043622: cortical microtubule organization	5.17E-03
62	GO:0016998: cell wall macromolecule catabolic process	5.52E-03
63	GO:0015992: proton transport	5.52E-03
64	GO:0006508: proteolysis	5.84E-03
65	GO:0009814: defense response, incompatible interaction	5.87E-03
66	GO:0031348: negative regulation of defense response	5.87E-03
67	GO:0080092: regulation of pollen tube growth	5.87E-03
68	GO:0006730: one-carbon metabolic process	5.87E-03
69	GO:0010584: pollen exine formation	6.61E-03
70	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.99E-03
71	GO:0010197: polar nucleus fusion	7.77E-03
72	GO:0048868: pollen tube development	7.77E-03
73	GO:0010268: brassinosteroid homeostasis	7.77E-03
74	GO:0045489: pectin biosynthetic process	7.77E-03
75	GO:0007018: microtubule-based movement	8.17E-03
76	GO:0009646: response to absence of light	8.17E-03
77	GO:0016132: brassinosteroid biosynthetic process	8.99E-03
78	GO:0071554: cell wall organization or biogenesis	8.99E-03
79	GO:0016032: viral process	9.42E-03
80	GO:0007264: small GTPase mediated signal transduction	9.42E-03
81	GO:0009658: chloroplast organization	1.01E-02
82	GO:0016125: sterol metabolic process	1.03E-02
83	GO:0009860: pollen tube growth	1.09E-02
84	GO:0009911: positive regulation of flower development	1.17E-02
85	GO:0048573: photoperiodism, flowering	1.31E-02
86	GO:0046777: protein autophosphorylation	1.34E-02
87	GO:0016311: dephosphorylation	1.36E-02
88	GO:0009834: plant-type secondary cell wall biogenesis	1.51E-02
89	GO:0045087: innate immune response	1.66E-02
90	GO:0009853: photorespiration	1.66E-02
91	GO:0008283: cell proliferation	1.99E-02
92	GO:0009873: ethylene-activated signaling pathway	2.40E-02
93	GO:0009809: lignin biosynthetic process	2.46E-02
94	GO:0010224: response to UV-B	2.52E-02
95	GO:0006417: regulation of translation	2.65E-02
96	GO:0006096: glycolytic process	2.77E-02
97	GO:0009058: biosynthetic process	3.85E-02
98	GO:0009790: embryo development	4.14E-02
99	GO:0006413: translational initiation	4.44E-02
100	GO:0040008: regulation of growth	4.51E-02
101	GO:0045490: pectin catabolic process	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
2	GO:0008115: sarcosine oxidase activity	0.00E+00
3	GO:0048039: ubiquinone binding	0.00E+00
4	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
5	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
6	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
7	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
8	GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity	0.00E+00
9	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	8.96E-05
10	GO:0004008: copper-exporting ATPase activity	8.96E-05
11	GO:0004829: threonine-tRNA ligase activity	2.12E-04
12	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	2.12E-04
13	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	2.12E-04
14	GO:0032549: ribonucleoside binding	3.54E-04
15	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	3.54E-04
16	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	3.54E-04
17	GO:0016805: dipeptidase activity	3.54E-04
18	GO:0008430: selenium binding	3.54E-04
19	GO:0004180: carboxypeptidase activity	3.54E-04
20	GO:0004848: ureidoglycolate hydrolase activity	3.54E-04
21	GO:0009678: hydrogen-translocating pyrophosphatase activity	5.10E-04
22	GO:0003999: adenine phosphoribosyltransferase activity	5.10E-04
23	GO:0070628: proteasome binding	6.78E-04
24	GO:0001053: plastid sigma factor activity	6.78E-04
25	GO:0016987: sigma factor activity	6.78E-04
26	GO:0016413: O-acetyltransferase activity	9.10E-04
27	GO:0008017: microtubule binding	9.26E-04
28	GO:0031593: polyubiquitin binding	1.05E-03
29	GO:0046872: metal ion binding	1.15E-03
30	GO:0004144: diacylglycerol O-acyltransferase activity	1.25E-03
31	GO:0009927: histidine phosphotransfer kinase activity	1.25E-03
32	GO:0004427: inorganic diphosphatase activity	1.46E-03
33	GO:0043022: ribosome binding	1.69E-03
34	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	1.93E-03
35	GO:0005375: copper ion transmembrane transporter activity	1.93E-03
36	GO:0016844: strictosidine synthase activity	2.43E-03
37	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.67E-03
38	GO:0004568: chitinase activity	2.70E-03
39	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.98E-03
40	GO:0001054: RNA polymerase I activity	2.98E-03
41	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.56E-03
42	GO:0043130: ubiquitin binding	4.83E-03
43	GO:0030570: pectate lyase activity	6.23E-03
44	GO:0004527: exonuclease activity	7.77E-03
45	GO:0008080: N-acetyltransferase activity	7.77E-03
46	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	8.29E-03
47	GO:0048038: quinone binding	8.99E-03
48	GO:0004518: nuclease activity	9.42E-03
49	GO:0003684: damaged DNA binding	1.03E-02
50	GO:0008237: metallopeptidase activity	1.07E-02
51	GO:0030247: polysaccharide binding	1.31E-02
52	GO:0008236: serine-type peptidase activity	1.36E-02
53	GO:0005096: GTPase activator activity	1.46E-02
54	GO:0004222: metalloendopeptidase activity	1.51E-02
55	GO:0003697: single-stranded DNA binding	1.66E-02
56	GO:0051539: 4 iron, 4 sulfur cluster binding	1.82E-02
57	GO:0009055: electron carrier activity	1.99E-02
58	GO:0051537: 2 iron, 2 sulfur cluster binding	2.10E-02
59	GO:0035091: phosphatidylinositol binding	2.10E-02
60	GO:0003690: double-stranded DNA binding	2.52E-02
61	GO:0003777: microtubule motor activity	2.65E-02
62	GO:0004672: protein kinase activity	2.65E-02
63	GO:0016887: ATPase activity	2.88E-02
64	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.78E-02
65	GO:0016829: lyase activity	3.92E-02
66	GO:0004252: serine-type endopeptidase activity	4.00E-02
67	GO:0015144: carbohydrate transmembrane transporter activity	4.22E-02
68	GO:0008565: protein transporter activity	4.22E-02
69	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.44E-02
70	GO:0005351: sugar:proton symporter activity	4.59E-02

Rank	GO Term	Adjusted P value
1	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
2	GO:0009574: preprophase band	3.36E-06
3	GO:0031209: SCAR complex	1.89E-05
4	GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex	8.96E-05
5	GO:0009507: chloroplast	1.08E-04
6	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	6.78E-04
7	GO:0072686: mitotic spindle	8.59E-04
8	GO:0010005: cortical microtubule, transverse to long axis	1.25E-03
9	GO:0031305: integral component of mitochondrial inner membrane	1.69E-03
10	GO:0005874: microtubule	1.89E-03
11	GO:0005811: lipid particle	1.93E-03
12	GO:0005736: DNA-directed RNA polymerase I complex	2.18E-03
13	GO:0005856: cytoskeleton	2.24E-03
14	GO:0055028: cortical microtubule	2.70E-03
15	GO:0005740: mitochondrial envelope	2.70E-03
16	GO:0016324: apical plasma membrane	2.70E-03
17	GO:0009535: chloroplast thylakoid membrane	3.36E-03
18	GO:0005578: proteinaceous extracellular matrix	3.56E-03
19	GO:0005938: cell cortex	3.56E-03
20	GO:0009706: chloroplast inner membrane	3.79E-03
21	GO:0009524: phragmoplast	4.99E-03
22	GO:0009536: plastid	5.08E-03
23	GO:0005871: kinesin complex	6.99E-03
24	GO:0009295: nucleoid	1.07E-02
25	GO:0019005: SCF ubiquitin ligase complex	1.41E-02
26	GO:0005819: spindle	1.77E-02
27	GO:0048046: apoplast	2.61E-02
28	GO:0005623: cell	3.78E-02
29	GO:0005759: mitochondrial matrix	4.36E-02
30	GO:0005773: vacuole	4.51E-02