co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G41920

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019447: D-cysteine catabolic process	0.00E+00
2	GO:0016576: histone dephosphorylation	0.00E+00
3	GO:0005997: xylulose metabolic process	0.00E+00
4	GO:0006044: N-acetylglucosamine metabolic process	0.00E+00
5	GO:1901333: positive regulation of lateral root development	0.00E+00
6	GO:0048856: anatomical structure development	0.00E+00
7	GO:0050891: multicellular organismal water homeostasis	1.97E-05
8	GO:0010036: response to boron-containing substance	1.97E-05
9	GO:0010376: stomatal complex formation	1.97E-05
10	GO:0035335: peptidyl-tyrosine dephosphorylation	5.10E-05
11	GO:0010424: DNA methylation on cytosine within a CG sequence	5.10E-05
12	GO:0061087: positive regulation of histone H3-K27 methylation	5.10E-05
13	GO:0010069: zygote asymmetric cytokinesis in embryo sac	5.10E-05
14	GO:0010235: guard mother cell cytokinesis	5.10E-05
15	GO:0009629: response to gravity	5.10E-05
16	GO:1902806: regulation of cell cycle G1/S phase transition	9.05E-05
17	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	9.05E-05
18	GO:0090436: leaf pavement cell development	9.05E-05
19	GO:0045739: positive regulation of DNA repair	9.05E-05
20	GO:0046713: borate transport	1.36E-04
21	GO:0051322: anaphase	1.86E-04
22	GO:1902584: positive regulation of response to water deprivation	1.86E-04
23	GO:1901002: positive regulation of response to salt stress	1.86E-04
24	GO:0010438: cellular response to sulfur starvation	2.40E-04
25	GO:0009554: megasporogenesis	3.57E-04
26	GO:2000037: regulation of stomatal complex patterning	3.57E-04
27	GO:0010444: guard mother cell differentiation	4.19E-04
28	GO:0048528: post-embryonic root development	4.19E-04
29	GO:0032875: regulation of DNA endoreduplication	4.84E-04
30	GO:0010439: regulation of glucosinolate biosynthetic process	4.84E-04
31	GO:0010052: guard cell differentiation	5.50E-04
32	GO:0051453: regulation of intracellular pH	6.90E-04
33	GO:0006349: regulation of gene expression by genetic imprinting	6.90E-04
34	GO:0010216: maintenance of DNA methylation	8.37E-04
35	GO:0009682: induced systemic resistance	8.37E-04
36	GO:0000162: tryptophan biosynthetic process	1.23E-03
37	GO:0009294: DNA mediated transformation	1.68E-03
38	GO:0009625: response to insect	1.68E-03
39	GO:0009693: ethylene biosynthetic process	1.68E-03
40	GO:0080022: primary root development	1.98E-03
41	GO:0000226: microtubule cytoskeleton organization	1.98E-03
42	GO:0045489: pectin biosynthetic process	2.08E-03
43	GO:0009851: auxin biosynthetic process	2.29E-03
44	GO:0010583: response to cyclopentenone	2.50E-03
45	GO:0000910: cytokinesis	2.95E-03
46	GO:0006357: regulation of transcription from RNA polymerase II promoter	3.52E-03
47	GO:0009734: auxin-activated signaling pathway	3.74E-03
48	GO:0009910: negative regulation of flower development	4.06E-03
49	GO:0016051: carbohydrate biosynthetic process	4.32E-03
50	GO:0008283: cell proliferation	5.13E-03
51	GO:0009926: auxin polar transport	5.13E-03
52	GO:0016569: covalent chromatin modification	7.72E-03
53	GO:0009553: embryo sac development	7.89E-03
54	GO:0030154: cell differentiation	1.04E-02
55	GO:0009733: response to auxin	1.07E-02
56	GO:0009739: response to gibberellin	1.28E-02
57	GO:0006470: protein dephosphorylation	1.30E-02
58	GO:0009617: response to bacterium	1.34E-02
59	GO:0005975: carbohydrate metabolic process	1.45E-02
60	GO:0044550: secondary metabolite biosynthetic process	1.99E-02
61	GO:0032259: methylation	2.40E-02
62	GO:0009751: response to salicylic acid	2.45E-02
63	GO:0009753: response to jasmonic acid	2.60E-02
64	GO:0016567: protein ubiquitination	2.91E-02
65	GO:0009416: response to light stimulus	3.72E-02
66	GO:0006511: ubiquitin-dependent protein catabolic process	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0008660: 1-aminocyclopropane-1-carboxylate deaminase activity	0.00E+00
2	GO:0019148: D-cysteine desulfhydrase activity	0.00E+00
3	GO:0004343: glucosamine 6-phosphate N-acetyltransferase activity	0.00E+00
4	GO:0030946: protein tyrosine phosphatase activity, metal-dependent	0.00E+00
5	GO:0080139: borate efflux transmembrane transporter activity	1.97E-05
6	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.97E-05
7	GO:0004856: xylulokinase activity	1.97E-05
8	GO:0046715: borate transmembrane transporter activity	1.36E-04
9	GO:0004834: tryptophan synthase activity	1.86E-04
10	GO:0015301: anion:anion antiporter activity	2.40E-04
11	GO:0005452: inorganic anion exchanger activity	2.40E-04
12	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.40E-04
13	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	3.57E-04
14	GO:0008168: methyltransferase activity	1.43E-03
15	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.59E-03
16	GO:0008080: N-acetyltransferase activity	2.08E-03
17	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.18E-03
18	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	2.42E-03
19	GO:0050897: cobalt ion binding	4.06E-03
20	GO:0031625: ubiquitin protein ligase binding	6.76E-03
21	GO:0005516: calmodulin binding	7.06E-03
22	GO:0004650: polygalacturonase activity	7.56E-03
23	GO:0044212: transcription regulatory region DNA binding	9.51E-03
24	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	9.60E-03
25	GO:0016829: lyase activity	9.96E-03
26	GO:0008017: microtubule binding	1.22E-02
27	GO:0003682: chromatin binding	1.67E-02
28	GO:0004497: monooxygenase activity	1.87E-02
29	GO:0061630: ubiquitin protein ligase activity	1.94E-02
30	GO:0004871: signal transducer activity	2.20E-02
31	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.25E-02
32	GO:0016757: transferase activity, transferring glycosyl groups	3.25E-02
33	GO:0016740: transferase activity	4.29E-02
34	GO:0019825: oxygen binding	4.79E-02
35	GO:0043565: sequence-specific DNA binding	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0043674: columella	1.97E-05
2	GO:0016328: lateral plasma membrane	9.05E-05
3	GO:0072686: mitotic spindle	2.40E-04
4	GO:0000922: spindle pole	6.19E-04
5	GO:0055028: cortical microtubule	7.62E-04
6	GO:0009574: preprophase band	9.90E-04
7	GO:0005768: endosome	1.20E-03
8	GO:0005874: microtubule	1.76E-03
9	GO:0005819: spindle	4.58E-03
10	GO:0010008: endosome membrane	7.24E-03
11	GO:0005802: trans-Golgi network	7.52E-03
12	GO:0009524: phragmoplast	9.78E-03
13	GO:0000139: Golgi membrane	1.29E-02
14	GO:0005789: endoplasmic reticulum membrane	1.46E-02
15	GO:0005794: Golgi apparatus	1.48E-02
16	GO:0031969: chloroplast membrane	1.87E-02
17	GO:0016021: integral component of membrane	2.64E-02
18	GO:0005887: integral component of plasma membrane	3.08E-02
19	GO:0005777: peroxisome	4.11E-02