Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G41610

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033587: shikimate biosynthetic process0.00E+00
2GO:0032491: detection of molecule of fungal origin0.00E+00
3GO:0046865: terpenoid transport0.00E+00
4GO:0010324: membrane invagination0.00E+00
5GO:0032499: detection of peptidoglycan0.00E+00
6GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
7GO:0071327: cellular response to trehalose stimulus0.00E+00
8GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
9GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
10GO:0009312: oligosaccharide biosynthetic process0.00E+00
11GO:1900367: positive regulation of defense response to insect0.00E+00
12GO:0002764: immune response-regulating signaling pathway0.00E+00
13GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
14GO:0010200: response to chitin4.89E-07
15GO:0060548: negative regulation of cell death1.56E-06
16GO:0006468: protein phosphorylation1.87E-06
17GO:0019725: cellular homeostasis1.04E-05
18GO:0009751: response to salicylic acid1.75E-05
19GO:0042742: defense response to bacterium1.94E-05
20GO:0031348: negative regulation of defense response3.27E-05
21GO:0006952: defense response3.35E-05
22GO:0009737: response to abscisic acid3.50E-05
23GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway6.61E-05
24GO:0045227: capsule polysaccharide biosynthetic process1.32E-04
25GO:0033358: UDP-L-arabinose biosynthetic process1.32E-04
26GO:0009266: response to temperature stimulus1.89E-04
27GO:0010150: leaf senescence2.05E-04
28GO:0006470: protein dephosphorylation2.76E-04
29GO:0002238: response to molecule of fungal origin2.88E-04
30GO:0009643: photosynthetic acclimation2.88E-04
31GO:0009626: plant-type hypersensitive response2.96E-04
32GO:0031930: mitochondria-nucleus signaling pathway3.85E-04
33GO:0071456: cellular response to hypoxia4.39E-04
34GO:2000022: regulation of jasmonic acid mediated signaling pathway4.39E-04
35GO:0050691: regulation of defense response to virus by host4.87E-04
36GO:0042759: long-chain fatty acid biosynthetic process4.87E-04
37GO:0009968: negative regulation of signal transduction4.87E-04
38GO:1990542: mitochondrial transmembrane transport4.87E-04
39GO:0048508: embryonic meristem development4.87E-04
40GO:0015760: glucose-6-phosphate transport4.87E-04
41GO:0046256: 2,4,6-trinitrotoluene catabolic process4.87E-04
42GO:0043547: positive regulation of GTPase activity4.87E-04
43GO:0019567: arabinose biosynthetic process4.87E-04
44GO:0015969: guanosine tetraphosphate metabolic process4.87E-04
45GO:1901183: positive regulation of camalexin biosynthetic process4.87E-04
46GO:0009270: response to humidity4.87E-04
47GO:0009625: response to insect4.92E-04
48GO:1900056: negative regulation of leaf senescence4.95E-04
49GO:0009787: regulation of abscisic acid-activated signaling pathway6.17E-04
50GO:0010204: defense response signaling pathway, resistance gene-independent7.51E-04
51GO:2000031: regulation of salicylic acid mediated signaling pathway7.51E-04
52GO:0009749: response to glucose8.87E-04
53GO:0010112: regulation of systemic acquired resistance8.99E-04
54GO:0046777: protein autophosphorylation9.21E-04
55GO:0009945: radial axis specification1.05E-03
56GO:0015712: hexose phosphate transport1.05E-03
57GO:0015012: heparan sulfate proteoglycan biosynthetic process1.05E-03
58GO:0010155: regulation of proton transport1.05E-03
59GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.05E-03
60GO:0080185: effector dependent induction by symbiont of host immune response1.05E-03
61GO:0010618: aerenchyma formation1.05E-03
62GO:0006024: glycosaminoglycan biosynthetic process1.05E-03
63GO:1902066: regulation of cell wall pectin metabolic process1.05E-03
64GO:0010115: regulation of abscisic acid biosynthetic process1.05E-03
65GO:0043066: negative regulation of apoptotic process1.05E-03
66GO:0015865: purine nucleotide transport1.05E-03
67GO:0002240: response to molecule of oomycetes origin1.05E-03
68GO:0044419: interspecies interaction between organisms1.05E-03
69GO:0010271: regulation of chlorophyll catabolic process1.05E-03
70GO:0031349: positive regulation of defense response1.05E-03
71GO:1900426: positive regulation of defense response to bacterium1.06E-03
72GO:0007166: cell surface receptor signaling pathway1.26E-03
73GO:0006904: vesicle docking involved in exocytosis1.32E-03
74GO:1901672: positive regulation of systemic acquired resistance1.71E-03
75GO:0035436: triose phosphate transmembrane transport1.71E-03
76GO:0045793: positive regulation of cell size1.71E-03
77GO:0045836: positive regulation of meiotic nuclear division1.71E-03
78GO:0010186: positive regulation of cellular defense response1.71E-03
79GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.71E-03
80GO:0015692: lead ion transport1.71E-03
81GO:0015714: phosphoenolpyruvate transport1.71E-03
82GO:0080168: abscisic acid transport1.71E-03
83GO:0048586: regulation of long-day photoperiodism, flowering1.71E-03
84GO:0032922: circadian regulation of gene expression1.71E-03
85GO:0006954: inflammatory response1.71E-03
86GO:0010498: proteasomal protein catabolic process1.71E-03
87GO:0034051: negative regulation of plant-type hypersensitive response1.71E-03
88GO:0016045: detection of bacterium1.71E-03
89GO:1900140: regulation of seedling development1.71E-03
90GO:0010359: regulation of anion channel activity1.71E-03
91GO:2000028: regulation of photoperiodism, flowering1.85E-03
92GO:0035556: intracellular signal transduction1.90E-03
93GO:0002237: response to molecule of bacterial origin2.09E-03
94GO:0007034: vacuolar transport2.09E-03
95GO:0009225: nucleotide-sugar metabolic process2.34E-03
96GO:0006499: N-terminal protein myristoylation2.45E-03
97GO:0071323: cellular response to chitin2.48E-03
98GO:0046513: ceramide biosynthetic process2.48E-03
99GO:0046836: glycolipid transport2.48E-03
100GO:0048194: Golgi vesicle budding2.48E-03
101GO:0046902: regulation of mitochondrial membrane permeability2.48E-03
102GO:0010104: regulation of ethylene-activated signaling pathway2.48E-03
103GO:0010731: protein glutathionylation2.48E-03
104GO:0072583: clathrin-dependent endocytosis2.48E-03
105GO:0080147: root hair cell development2.90E-03
106GO:0009867: jasmonic acid mediated signaling pathway2.92E-03
107GO:0015713: phosphoglycerate transport3.34E-03
108GO:0080142: regulation of salicylic acid biosynthetic process3.34E-03
109GO:0010109: regulation of photosynthesis3.34E-03
110GO:0071219: cellular response to molecule of bacterial origin3.34E-03
111GO:0010508: positive regulation of autophagy3.34E-03
112GO:0006897: endocytosis3.64E-03
113GO:0051707: response to other organism4.05E-03
114GO:0006012: galactose metabolic process4.21E-03
115GO:0009435: NAD biosynthetic process4.28E-03
116GO:0018344: protein geranylgeranylation4.28E-03
117GO:0010225: response to UV-C4.28E-03
118GO:0009247: glycolipid biosynthetic process4.28E-03
119GO:0009697: salicylic acid biosynthetic process4.28E-03
120GO:0045927: positive regulation of growth4.28E-03
121GO:0034052: positive regulation of plant-type hypersensitive response4.28E-03
122GO:0006855: drug transmembrane transport4.93E-03
123GO:0031347: regulation of defense response5.17E-03
124GO:0018258: protein O-linked glycosylation via hydroxyproline5.30E-03
125GO:0009759: indole glucosinolate biosynthetic process5.30E-03
126GO:0010942: positive regulation of cell death5.30E-03
127GO:0010405: arabinogalactan protein metabolic process5.30E-03
128GO:0033365: protein localization to organelle5.30E-03
129GO:0010337: regulation of salicylic acid metabolic process5.30E-03
130GO:0006486: protein glycosylation5.92E-03
131GO:0009423: chorismate biosynthetic process6.40E-03
132GO:0010310: regulation of hydrogen peroxide metabolic process6.40E-03
133GO:0071470: cellular response to osmotic stress6.40E-03
134GO:0045926: negative regulation of growth6.40E-03
135GO:0009942: longitudinal axis specification6.40E-03
136GO:0010193: response to ozone7.16E-03
137GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.57E-03
138GO:0046470: phosphatidylcholine metabolic process7.57E-03
139GO:0071446: cellular response to salicylic acid stimulus7.57E-03
140GO:0007264: small GTPase mediated signal transduction7.65E-03
141GO:0019375: galactolipid biosynthetic process8.81E-03
142GO:0030162: regulation of proteolysis8.81E-03
143GO:0045010: actin nucleation8.81E-03
144GO:0031540: regulation of anthocyanin biosynthetic process8.81E-03
145GO:0010928: regulation of auxin mediated signaling pathway8.81E-03
146GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline8.81E-03
147GO:0009819: drought recovery8.81E-03
148GO:0043068: positive regulation of programmed cell death8.81E-03
149GO:0009624: response to nematode9.30E-03
150GO:0018105: peptidyl-serine phosphorylation9.66E-03
151GO:0009932: cell tip growth1.01E-02
152GO:0010120: camalexin biosynthetic process1.01E-02
153GO:0009816: defense response to bacterium, incompatible interaction1.10E-02
154GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.10E-02
155GO:0006098: pentose-phosphate shunt1.15E-02
156GO:0046916: cellular transition metal ion homeostasis1.15E-02
157GO:0009627: systemic acquired resistance1.16E-02
158GO:0006950: response to stress1.23E-02
159GO:0043067: regulation of programmed cell death1.29E-02
160GO:0048268: clathrin coat assembly1.29E-02
161GO:0048354: mucilage biosynthetic process involved in seed coat development1.29E-02
162GO:0010380: regulation of chlorophyll biosynthetic process1.29E-02
163GO:0009817: defense response to fungus, incompatible interaction1.36E-02
164GO:0006032: chitin catabolic process1.45E-02
165GO:0009870: defense response signaling pathway, resistance gene-dependent1.45E-02
166GO:0009409: response to cold1.49E-02
167GO:0009407: toxin catabolic process1.50E-02
168GO:0009790: embryo development1.51E-02
169GO:0010119: regulation of stomatal movement1.58E-02
170GO:0009631: cold acclimation1.58E-02
171GO:0019684: photosynthesis, light reaction1.60E-02
172GO:0009089: lysine biosynthetic process via diaminopimelate1.60E-02
173GO:0009073: aromatic amino acid family biosynthetic process1.60E-02
174GO:0016567: protein ubiquitination1.61E-02
175GO:0045087: innate immune response1.73E-02
176GO:0010105: negative regulation of ethylene-activated signaling pathway1.76E-02
177GO:0000266: mitochondrial fission1.76E-02
178GO:0002213: defense response to insect1.76E-02
179GO:0018107: peptidyl-threonine phosphorylation1.93E-02
180GO:0055046: microgametogenesis1.93E-02
181GO:0006829: zinc II ion transport1.93E-02
182GO:0009414: response to water deprivation2.03E-02
183GO:0006887: exocytosis2.06E-02
184GO:0009408: response to heat2.13E-02
185GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.15E-02
186GO:0046854: phosphatidylinositol phosphorylation2.28E-02
187GO:0046688: response to copper ion2.28E-02
188GO:0010167: response to nitrate2.28E-02
189GO:0009753: response to jasmonic acid2.37E-02
190GO:0009636: response to toxic substance2.51E-02
191GO:0055085: transmembrane transport2.53E-02
192GO:0045333: cellular respiration2.66E-02
193GO:2000377: regulation of reactive oxygen species metabolic process2.66E-02
194GO:0009863: salicylic acid mediated signaling pathway2.66E-02
195GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.71E-02
196GO:0042538: hyperosmotic salinity response2.81E-02
197GO:0006825: copper ion transport2.85E-02
198GO:0016998: cell wall macromolecule catabolic process3.05E-02
199GO:0009269: response to desiccation3.05E-02
200GO:0051321: meiotic cell cycle3.05E-02
201GO:0010017: red or far-red light signaling pathway3.25E-02
202GO:0016226: iron-sulfur cluster assembly3.25E-02
203GO:0050832: defense response to fungus3.39E-02
204GO:0007165: signal transduction3.61E-02
205GO:0009561: megagametogenesis3.67E-02
206GO:0009306: protein secretion3.67E-02
207GO:0042127: regulation of cell proliferation3.67E-02
208GO:0009723: response to ethylene3.87E-02
209GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.89E-02
210GO:0009620: response to fungus3.91E-02
211GO:0000271: polysaccharide biosynthetic process4.11E-02
212GO:0042391: regulation of membrane potential4.11E-02
213GO:0042631: cellular response to water deprivation4.11E-02
214GO:0010182: sugar mediated signaling pathway4.33E-02
215GO:0045489: pectin biosynthetic process4.33E-02
216GO:0009646: response to absence of light4.56E-02
217GO:0009738: abscisic acid-activated signaling pathway4.69E-02
218GO:0015979: photosynthesis4.95E-02
RankGO TermAdjusted P value
1GO:0004107: chorismate synthase activity0.00E+00
2GO:2001080: chitosan binding0.00E+00
3GO:0005212: structural constituent of eye lens0.00E+00
4GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
5GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
6GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
7GO:0008734: L-aspartate oxidase activity0.00E+00
8GO:0005522: profilin binding0.00E+00
9GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
10GO:0016301: kinase activity4.11E-08
11GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.46E-06
12GO:0004674: protein serine/threonine kinase activity4.36E-06
13GO:0005524: ATP binding4.41E-05
14GO:0050373: UDP-arabinose 4-epimerase activity1.32E-04
15GO:0019199: transmembrane receptor protein kinase activity1.32E-04
16GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.59E-04
17GO:0005509: calcium ion binding2.44E-04
18GO:0003978: UDP-glucose 4-epimerase activity3.85E-04
19GO:0004012: phospholipid-translocating ATPase activity3.85E-04
20GO:0046481: digalactosyldiacylglycerol synthase activity4.87E-04
21GO:0010285: L,L-diaminopimelate aminotransferase activity4.87E-04
22GO:0032050: clathrin heavy chain binding4.87E-04
23GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.87E-04
24GO:1901149: salicylic acid binding4.87E-04
25GO:0004662: CAAX-protein geranylgeranyltransferase activity4.87E-04
26GO:0004714: transmembrane receptor protein tyrosine kinase activity6.17E-04
27GO:0005515: protein binding7.69E-04
28GO:0004842: ubiquitin-protein transferase activity7.99E-04
29GO:0004675: transmembrane receptor protein serine/threonine kinase activity8.81E-04
30GO:0019901: protein kinase binding8.87E-04
31GO:0008728: GTP diphosphokinase activity1.05E-03
32GO:0048531: beta-1,3-galactosyltransferase activity1.05E-03
33GO:0050291: sphingosine N-acyltransferase activity1.05E-03
34GO:0047364: desulfoglucosinolate sulfotransferase activity1.05E-03
35GO:0015152: glucose-6-phosphate transmembrane transporter activity1.05E-03
36GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.05E-03
37GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.05E-03
38GO:0015036: disulfide oxidoreductase activity1.05E-03
39GO:0004568: chitinase activity1.23E-03
40GO:0004722: protein serine/threonine phosphatase activity1.38E-03
41GO:0008559: xenobiotic-transporting ATPase activity1.42E-03
42GO:0071917: triose-phosphate transmembrane transporter activity1.71E-03
43GO:0004324: ferredoxin-NADP+ reductase activity1.71E-03
44GO:0016531: copper chaperone activity1.71E-03
45GO:0017077: oxidative phosphorylation uncoupler activity2.48E-03
46GO:0017089: glycolipid transporter activity2.48E-03
47GO:0035250: UDP-galactosyltransferase activity2.48E-03
48GO:0004930: G-protein coupled receptor activity3.34E-03
49GO:0009916: alternative oxidase activity3.34E-03
50GO:0015120: phosphoglycerate transmembrane transporter activity3.34E-03
51GO:0051861: glycolipid binding3.34E-03
52GO:0033612: receptor serine/threonine kinase binding3.52E-03
53GO:0005496: steroid binding4.28E-03
54GO:0005471: ATP:ADP antiporter activity4.28E-03
55GO:0045431: flavonol synthase activity4.28E-03
56GO:1990714: hydroxyproline O-galactosyltransferase activity5.30E-03
57GO:0046872: metal ion binding5.83E-03
58GO:0042626: ATPase activity, coupled to transmembrane movement of substances6.34E-03
59GO:0004656: procollagen-proline 4-dioxygenase activity6.40E-03
60GO:0004723: calcium-dependent protein serine/threonine phosphatase activity6.40E-03
61GO:0004672: protein kinase activity6.88E-03
62GO:0043295: glutathione binding7.57E-03
63GO:0005544: calcium-dependent phospholipid binding8.81E-03
64GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.24E-03
65GO:0004430: 1-phosphatidylinositol 4-kinase activity1.01E-02
66GO:0004630: phospholipase D activity1.01E-02
67GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity1.01E-02
68GO:0071949: FAD binding1.15E-02
69GO:0009931: calcium-dependent protein serine/threonine kinase activity1.16E-02
70GO:0008375: acetylglucosaminyltransferase activity1.16E-02
71GO:0016758: transferase activity, transferring hexosyl groups1.20E-02
72GO:0004683: calmodulin-dependent protein kinase activity1.23E-02
73GO:0043565: sequence-specific DNA binding1.28E-02
74GO:0015238: drug transmembrane transporter activity1.43E-02
75GO:0005545: 1-phosphatidylinositol binding1.45E-02
76GO:0015020: glucuronosyltransferase activity1.45E-02
77GO:0004713: protein tyrosine kinase activity1.45E-02
78GO:0005543: phospholipid binding1.60E-02
79GO:0015297: antiporter activity1.76E-02
80GO:0008378: galactosyltransferase activity1.76E-02
81GO:0005315: inorganic phosphate transmembrane transporter activity1.93E-02
82GO:0031072: heat shock protein binding1.93E-02
83GO:0004364: glutathione transferase activity2.14E-02
84GO:0004190: aspartic-type endopeptidase activity2.28E-02
85GO:0030552: cAMP binding2.28E-02
86GO:0030553: cGMP binding2.28E-02
87GO:0008061: chitin binding2.28E-02
88GO:0008146: sulfotransferase activity2.28E-02
89GO:0031418: L-ascorbic acid binding2.66E-02
90GO:0003954: NADH dehydrogenase activity2.66E-02
91GO:0051087: chaperone binding2.85E-02
92GO:0043424: protein histidine kinase binding2.85E-02
93GO:0005216: ion channel activity2.85E-02
94GO:0008324: cation transmembrane transporter activity2.85E-02
95GO:0019706: protein-cysteine S-palmitoyltransferase activity3.05E-02
96GO:0004707: MAP kinase activity3.05E-02
97GO:0000287: magnesium ion binding3.16E-02
98GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.25E-02
99GO:0031625: ubiquitin protein ligase binding3.33E-02
100GO:0043531: ADP binding3.62E-02
101GO:0016874: ligase activity4.03E-02
102GO:0005249: voltage-gated potassium channel activity4.11E-02
103GO:0030551: cyclic nucleotide binding4.11E-02
104GO:0046873: metal ion transmembrane transporter activity4.33E-02
105GO:0030276: clathrin binding4.33E-02
106GO:0016757: transferase activity, transferring glycosyl groups4.53E-02
107GO:0010181: FMN binding4.56E-02
108GO:0004872: receptor activity4.80E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane6.78E-10
2GO:0016021: integral component of membrane7.08E-06
3GO:0005901: caveola1.04E-05
4GO:0005911: cell-cell junction4.87E-04
5GO:0005953: CAAX-protein geranylgeranyltransferase complex4.87E-04
6GO:0031314: extrinsic component of mitochondrial inner membrane1.05E-03
7GO:0031304: intrinsic component of mitochondrial inner membrane1.05E-03
8GO:0030139: endocytic vesicle1.71E-03
9GO:0008287: protein serine/threonine phosphatase complex1.71E-03
10GO:0070062: extracellular exosome2.48E-03
11GO:0005758: mitochondrial intermembrane space2.90E-03
12GO:0000813: ESCRT I complex4.28E-03
13GO:0000164: protein phosphatase type 1 complex4.28E-03
14GO:0005743: mitochondrial inner membrane5.49E-03
15GO:0000815: ESCRT III complex6.40E-03
16GO:0000145: exocyst7.65E-03
17GO:0032580: Golgi cisterna membrane8.69E-03
18GO:0005740: mitochondrial envelope1.45E-02
19GO:0030125: clathrin vesicle coat1.45E-02
20GO:0005737: cytoplasm1.54E-02
21GO:0000325: plant-type vacuole1.58E-02
22GO:0005774: vacuolar membrane2.20E-02
23GO:0005795: Golgi stack2.28E-02
24GO:0070469: respiratory chain2.85E-02
25GO:0005905: clathrin-coated pit3.05E-02
26GO:0005741: mitochondrial outer membrane3.05E-02
27GO:0030136: clathrin-coated vesicle3.89E-02
28GO:0012505: endomembrane system4.15E-02
29GO:0005768: endosome4.59E-02
30GO:0005789: endoplasmic reticulum membrane4.64E-02
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Gene type



Gene DE type