co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G41600

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1905157: positive regulation of photosynthesis	0.00E+00
2	GO:0000476: maturation of 4.5S rRNA	4.45E-05
3	GO:0000967: rRNA 5'-end processing	4.45E-05
4	GO:0010020: chloroplast fission	7.22E-05
5	GO:0034470: ncRNA processing	1.10E-04
6	GO:2000030: regulation of response to red or far red light	1.10E-04
7	GO:0006898: receptor-mediated endocytosis	1.10E-04
8	GO:0009768: photosynthesis, light harvesting in photosystem I	1.17E-04
9	GO:0015940: pantothenate biosynthetic process	1.89E-04
10	GO:0005977: glycogen metabolic process	1.89E-04
11	GO:0019252: starch biosynthetic process	2.57E-04
12	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.78E-04
13	GO:0009152: purine ribonucleotide biosynthetic process	2.78E-04
14	GO:0046653: tetrahydrofolate metabolic process	2.78E-04
15	GO:0032502: developmental process	2.95E-04
16	GO:0071483: cellular response to blue light	3.73E-04
17	GO:0010021: amylopectin biosynthetic process	3.73E-04
18	GO:0009765: photosynthesis, light harvesting	3.73E-04
19	GO:0009904: chloroplast accumulation movement	4.75E-04
20	GO:0018298: protein-chromophore linkage	5.18E-04
21	GO:0010218: response to far red light	5.68E-04
22	GO:0009643: photosynthetic acclimation	5.82E-04
23	GO:0009637: response to blue light	6.50E-04
24	GO:0009903: chloroplast avoidance movement	6.94E-04
25	GO:0071333: cellular response to glucose stimulus	6.94E-04
26	GO:0009645: response to low light intensity stimulus	8.11E-04
27	GO:1900056: negative regulation of leaf senescence	8.11E-04
28	GO:0009769: photosynthesis, light harvesting in photosystem II	8.11E-04
29	GO:0010114: response to red light	8.29E-04
30	GO:0016559: peroxisome fission	9.32E-04
31	GO:0042255: ribosome assembly	9.32E-04
32	GO:0006353: DNA-templated transcription, termination	9.32E-04
33	GO:0009657: plastid organization	1.06E-03
34	GO:0010380: regulation of chlorophyll biosynthetic process	1.32E-03
35	GO:0072593: reactive oxygen species metabolic process	1.61E-03
36	GO:0030048: actin filament-based movement	1.92E-03
37	GO:0007015: actin filament organization	2.09E-03
38	GO:0019762: glucosinolate catabolic process	2.42E-03
39	GO:0009269: response to desiccation	2.96E-03
40	GO:0019748: secondary metabolic process	3.14E-03
41	GO:0071215: cellular response to abscisic acid stimulus	3.33E-03
42	GO:0009306: protein secretion	3.53E-03
43	GO:0009658: chloroplast organization	4.04E-03
44	GO:0006520: cellular amino acid metabolic process	4.14E-03
45	GO:0071554: cell wall organization or biogenesis	4.77E-03
46	GO:0009630: gravitropism	4.99E-03
47	GO:1901657: glycosyl compound metabolic process	5.22E-03
48	GO:0015979: photosynthesis	5.71E-03
49	GO:0032259: methylation	7.07E-03
50	GO:0016311: dephosphorylation	7.14E-03
51	GO:0009407: toxin catabolic process	7.91E-03
52	GO:0006811: ion transport	7.91E-03
53	GO:0009910: negative regulation of flower development	8.18E-03
54	GO:0005975: carbohydrate metabolic process	8.58E-03
55	GO:0009853: photorespiration	8.71E-03
56	GO:0034599: cellular response to oxidative stress	8.99E-03
57	GO:0009644: response to high light intensity	1.10E-02
58	GO:0009636: response to toxic substance	1.13E-02
59	GO:0006813: potassium ion transport	1.28E-02
60	GO:0009416: response to light stimulus	1.31E-02
61	GO:0009058: biosynthetic process	2.01E-02
62	GO:0040008: regulation of growth	2.35E-02
63	GO:0007623: circadian rhythm	2.43E-02
64	GO:0010150: leaf senescence	2.43E-02
65	GO:0010228: vegetative to reproductive phase transition of meristem	2.51E-02
66	GO:0008380: RNA splicing	2.76E-02
67	GO:0006970: response to osmotic stress	3.50E-02
68	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.96E-02
69	GO:0016192: vesicle-mediated transport	4.01E-02
70	GO:0016042: lipid catabolic process	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
2	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
3	GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity	4.45E-05
4	GO:0031409: pigment binding	9.34E-05
5	GO:0018708: thiol S-methyltransferase activity	1.10E-04
6	GO:0019156: isoamylase activity	1.10E-04
7	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.10E-04
8	GO:0004751: ribose-5-phosphate isomerase activity	1.89E-04
9	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.89E-04
10	GO:0008864: formyltetrahydrofolate deformylase activity	1.89E-04
11	GO:0022890: inorganic cation transmembrane transporter activity	2.78E-04
12	GO:0009011: starch synthase activity	3.73E-04
13	GO:0016168: chlorophyll binding	4.21E-04
14	GO:0004556: alpha-amylase activity	5.82E-04
15	GO:0019899: enzyme binding	8.11E-04
16	GO:0015386: potassium:proton antiporter activity	1.61E-03
17	GO:0004022: alcohol dehydrogenase (NAD) activity	1.92E-03
18	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.09E-03
19	GO:0003774: motor activity	2.09E-03
20	GO:0005216: ion channel activity	2.77E-03
21	GO:0015079: potassium ion transmembrane transporter activity	2.77E-03
22	GO:0042802: identical protein binding	3.33E-03
23	GO:0003727: single-stranded RNA binding	3.53E-03
24	GO:0008168: methyltransferase activity	3.89E-03
25	GO:0015299: solute:proton antiporter activity	4.35E-03
26	GO:0016413: O-acetyltransferase activity	5.91E-03
27	GO:0102483: scopolin beta-glucosidase activity	6.89E-03
28	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	7.14E-03
29	GO:0016491: oxidoreductase activity	7.17E-03
30	GO:0003993: acid phosphatase activity	8.99E-03
31	GO:0008422: beta-glucosidase activity	9.27E-03
32	GO:0004364: glutathione transferase activity	1.01E-02
33	GO:0004185: serine-type carboxypeptidase activity	1.04E-02
34	GO:0003690: double-stranded DNA binding	1.32E-02
35	GO:0016787: hydrolase activity	1.33E-02
36	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.48E-02
37	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.73E-02
38	GO:0019843: rRNA binding	1.93E-02
39	GO:0008565: protein transporter activity	2.20E-02
40	GO:0008017: microtubule binding	2.51E-02
41	GO:0046982: protein heterodimerization activity	3.27E-02
42	GO:0004601: peroxidase activity	3.32E-02
43	GO:0016788: hydrolase activity, acting on ester bonds	3.36E-02
44	GO:0052689: carboxylic ester hydrolase activity	4.15E-02
45	GO:0004871: signal transducer activity	4.55E-02
46	GO:0004722: protein serine/threonine phosphatase activity	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	6.18E-05
2	GO:0030076: light-harvesting complex	8.24E-05
3	GO:0033281: TAT protein transport complex	1.89E-04
4	GO:0009522: photosystem I	2.39E-04
5	GO:0009523: photosystem II	2.57E-04
6	GO:0009526: plastid envelope	3.73E-04
7	GO:0009517: PSII associated light-harvesting complex II	3.73E-04
8	GO:0009535: chloroplast thylakoid membrane	6.57E-04
9	GO:0031982: vesicle	9.32E-04
10	GO:0016459: myosin complex	1.47E-03
11	GO:0010287: plastoglobule	1.82E-03
12	GO:0009508: plastid chromosome	1.92E-03
13	GO:0031969: chloroplast membrane	5.00E-03
14	GO:0009295: nucleoid	5.68E-03
15	GO:0009707: chloroplast outer membrane	7.39E-03
16	GO:0009941: chloroplast envelope	9.52E-03
17	GO:0005623: cell	1.97E-02
18	GO:0005773: vacuole	4.14E-02