co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G40990

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048227: plasma membrane to endosome transport	0.00E+00
2	GO:0015937: coenzyme A biosynthetic process	1.45E-06
3	GO:1900424: regulation of defense response to bacterium	1.21E-05
4	GO:0080026: response to indolebutyric acid	3.21E-05
5	GO:0007264: small GTPase mediated signal transduction	5.04E-05
6	GO:0010186: positive regulation of cellular defense response	5.78E-05
7	GO:0080024: indolebutyric acid metabolic process	8.79E-05
8	GO:0006383: transcription from RNA polymerase III promoter	8.79E-05
9	GO:1900150: regulation of defense response to fungus	3.27E-04
10	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.73E-04
11	GO:0000387: spliceosomal snRNP assembly	4.69E-04
12	GO:0090332: stomatal closure	4.69E-04
13	GO:2000652: regulation of secondary cell wall biogenesis	5.71E-04
14	GO:0000162: tryptophan biosynthetic process	8.44E-04
15	GO:0009723: response to ethylene	9.60E-04
16	GO:0019748: secondary metabolic process	1.08E-03
17	GO:0009411: response to UV	1.14E-03
18	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.27E-03
19	GO:0009753: response to jasmonic acid	1.59E-03
20	GO:0002229: defense response to oomycetes	1.61E-03
21	GO:0009873: ethylene-activated signaling pathway	1.91E-03
22	GO:0016310: phosphorylation	1.96E-03
23	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.14E-03
24	GO:0008219: cell death	2.46E-03
25	GO:0048767: root hair elongation	2.55E-03
26	GO:0045893: positive regulation of transcription, DNA-templated	2.98E-03
27	GO:0006839: mitochondrial transport	3.15E-03
28	GO:0006631: fatty acid metabolic process	3.24E-03
29	GO:0000165: MAPK cascade	3.90E-03
30	GO:0031347: regulation of defense response	3.90E-03
31	GO:0042538: hyperosmotic salinity response	4.00E-03
32	GO:0009809: lignin biosynthetic process	4.20E-03
33	GO:0051603: proteolysis involved in cellular protein catabolic process	4.30E-03
34	GO:0009620: response to fungus	5.02E-03
35	GO:0015031: protein transport	6.62E-03
36	GO:0040008: regulation of growth	7.55E-03
37	GO:0007166: cell surface receptor signaling pathway	8.56E-03
38	GO:0009617: response to bacterium	8.82E-03
39	GO:0046777: protein autophosphorylation	1.29E-02
40	GO:0045892: negative regulation of transcription, DNA-templated	1.41E-02
41	GO:0006869: lipid transport	1.49E-02
42	GO:0009751: response to salicylic acid	1.61E-02
43	GO:0009651: response to salt stress	1.76E-02
44	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.98E-02
45	GO:0009738: abscisic acid-activated signaling pathway	2.38E-02
46	GO:0009416: response to light stimulus	2.44E-02
47	GO:0006511: ubiquitin-dependent protein catabolic process	3.04E-02
48	GO:0009414: response to water deprivation	3.97E-02
49	GO:0030154: cell differentiation	4.29E-02
50	GO:0055114: oxidation-reduction process	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0005093: Rab GDP-dissociation inhibitor activity	5.28E-08
2	GO:0004633: phosphopantothenoylcysteine decarboxylase activity	1.21E-05
3	GO:0004048: anthranilate phosphoribosyltransferase activity	1.21E-05
4	GO:0004594: pantothenate kinase activity	3.21E-05
5	GO:0005096: GTPase activator activity	1.02E-04
6	GO:0000062: fatty-acyl-CoA binding	1.22E-04
7	GO:0004709: MAP kinase kinase kinase activity	1.98E-04
8	GO:0015114: phosphate ion transmembrane transporter activity	6.76E-04
9	GO:0016491: oxidoreductase activity	9.06E-04
10	GO:0004298: threonine-type endopeptidase activity	1.02E-03
11	GO:0010181: FMN binding	1.47E-03
12	GO:0030145: manganese ion binding	2.71E-03
13	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.06E-03
14	GO:0004185: serine-type carboxypeptidase activity	3.43E-03
15	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.20E-03
16	GO:0045735: nutrient reservoir activity	4.70E-03
17	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.81E-03
18	GO:0016874: ligase activity	5.13E-03
19	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	7.42E-03
20	GO:0005515: protein binding	1.01E-02
21	GO:0008233: peptidase activity	1.22E-02
22	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.40E-02
23	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	1.51E-02
24	GO:0009055: electron carrier activity	1.71E-02
25	GO:0008289: lipid binding	2.05E-02
26	GO:0016301: kinase activity	2.24E-02
27	GO:0043565: sequence-specific DNA binding	2.68E-02
28	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.08E-02
29	GO:0005516: calmodulin binding	3.27E-02
30	GO:0003677: DNA binding	3.86E-02
31	GO:0044212: transcription regulatory region DNA binding	4.04E-02

Rank	GO Term	Adjusted P value
1	GO:0012510: trans-Golgi network transport vesicle membrane	1.21E-05
2	GO:0005829: cytosol	7.55E-04
3	GO:0005769: early endosome	8.44E-04
4	GO:0005839: proteasome core complex	1.02E-03
5	GO:0031410: cytoplasmic vesicle	1.08E-03
6	GO:0000325: plant-type vacuole	2.71E-03
7	GO:0048046: apoplast	3.22E-03
8	GO:0005802: trans-Golgi network	4.14E-03
9	GO:0000502: proteasome complex	4.20E-03
10	GO:0005768: endosome	4.70E-03
11	GO:0005743: mitochondrial inner membrane	1.54E-02
12	GO:0005618: cell wall	2.08E-02
13	GO:0005777: peroxisome	2.69E-02
14	GO:0005783: endoplasmic reticulum	3.66E-02
15	GO:0009536: plastid	4.67E-02