Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G39050

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010055: atrichoblast differentiation0.00E+00
2GO:0006654: phosphatidic acid biosynthetic process0.00E+00
3GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
4GO:1902001: fatty acid transmembrane transport0.00E+00
5GO:1902289: negative regulation of defense response to oomycetes0.00E+00
6GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
7GO:0009312: oligosaccharide biosynthetic process0.00E+00
8GO:0015690: aluminum cation transport0.00E+00
9GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
10GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
11GO:1902009: positive regulation of toxin transport0.00E+00
12GO:0046865: terpenoid transport0.00E+00
13GO:0018063: cytochrome c-heme linkage0.00E+00
14GO:0051553: flavone biosynthetic process0.00E+00
15GO:0010324: membrane invagination0.00E+00
16GO:0010112: regulation of systemic acquired resistance2.30E-08
17GO:0042742: defense response to bacterium8.30E-06
18GO:0009751: response to salicylic acid3.13E-05
19GO:0071456: cellular response to hypoxia4.45E-05
20GO:0009617: response to bacterium7.98E-05
21GO:0001676: long-chain fatty acid metabolic process9.12E-05
22GO:0051707: response to other organism1.41E-04
23GO:0006952: defense response2.22E-04
24GO:0009643: photosynthetic acclimation3.38E-04
25GO:0009759: indole glucosinolate biosynthetic process3.38E-04
26GO:0006979: response to oxidative stress5.15E-04
27GO:0048508: embryonic meristem development5.40E-04
28GO:0015760: glucose-6-phosphate transport5.40E-04
29GO:1990641: response to iron ion starvation5.40E-04
30GO:0033306: phytol metabolic process5.40E-04
31GO:0046246: terpene biosynthetic process5.40E-04
32GO:0009700: indole phytoalexin biosynthetic process5.40E-04
33GO:0050691: regulation of defense response to virus by host5.40E-04
34GO:0010230: alternative respiration5.40E-04
35GO:0034214: protein hexamerization5.40E-04
36GO:1990542: mitochondrial transmembrane transport5.40E-04
37GO:0032107: regulation of response to nutrient levels5.40E-04
38GO:1900057: positive regulation of leaf senescence5.77E-04
39GO:0006102: isocitrate metabolic process7.18E-04
40GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline7.18E-04
41GO:0006605: protein targeting7.18E-04
42GO:0009611: response to wounding7.93E-04
43GO:0010120: camalexin biosynthetic process8.74E-04
44GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.16E-03
45GO:0009838: abscission1.16E-03
46GO:0080181: lateral root branching1.16E-03
47GO:0055088: lipid homeostasis1.16E-03
48GO:0006101: citrate metabolic process1.16E-03
49GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex1.16E-03
50GO:0015908: fatty acid transport1.16E-03
51GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine1.16E-03
52GO:0044419: interspecies interaction between organisms1.16E-03
53GO:0019725: cellular homeostasis1.16E-03
54GO:0009945: radial axis specification1.16E-03
55GO:0015712: hexose phosphate transport1.16E-03
56GO:0071668: plant-type cell wall assembly1.16E-03
57GO:0051258: protein polymerization1.16E-03
58GO:0010193: response to ozone1.17E-03
59GO:0010200: response to chitin1.18E-03
60GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.23E-03
61GO:0010150: leaf senescence1.31E-03
62GO:0009684: indoleacetic acid biosynthetic process1.66E-03
63GO:0007166: cell surface receptor signaling pathway1.66E-03
64GO:0051607: defense response to virus1.75E-03
65GO:0015783: GDP-fucose transport1.91E-03
66GO:0000266: mitochondrial fission1.91E-03
67GO:0010476: gibberellin mediated signaling pathway1.91E-03
68GO:0010325: raffinose family oligosaccharide biosynthetic process1.91E-03
69GO:0009410: response to xenobiotic stimulus1.91E-03
70GO:0015692: lead ion transport1.91E-03
71GO:0015714: phosphoenolpyruvate transport1.91E-03
72GO:0080168: abscisic acid transport1.91E-03
73GO:0015695: organic cation transport1.91E-03
74GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.91E-03
75GO:0035436: triose phosphate transmembrane transport1.91E-03
76GO:0045037: protein import into chloroplast stroma1.91E-03
77GO:0080163: regulation of protein serine/threonine phosphatase activity1.91E-03
78GO:0071398: cellular response to fatty acid1.91E-03
79GO:0010186: positive regulation of cellular defense response1.91E-03
80GO:0009620: response to fungus2.11E-03
81GO:0002237: response to molecule of bacterial origin2.45E-03
82GO:0015031: protein transport2.69E-03
83GO:0070301: cellular response to hydrogen peroxide2.76E-03
84GO:0002239: response to oomycetes2.76E-03
85GO:0010731: protein glutathionylation2.76E-03
86GO:0015696: ammonium transport2.76E-03
87GO:0071323: cellular response to chitin2.76E-03
88GO:0080024: indolebutyric acid metabolic process2.76E-03
89GO:0055070: copper ion homeostasis2.76E-03
90GO:0010116: positive regulation of abscisic acid biosynthetic process2.76E-03
91GO:0008152: metabolic process2.91E-03
92GO:0000162: tryptophan biosynthetic process3.06E-03
93GO:0080147: root hair cell development3.40E-03
94GO:0030150: protein import into mitochondrial matrix3.40E-03
95GO:0010109: regulation of photosynthesis3.72E-03
96GO:0060548: negative regulation of cell death3.72E-03
97GO:0009939: positive regulation of gibberellic acid mediated signaling pathway3.72E-03
98GO:0048830: adventitious root development3.72E-03
99GO:1901002: positive regulation of response to salt stress3.72E-03
100GO:0072488: ammonium transmembrane transport3.72E-03
101GO:0006621: protein retention in ER lumen3.72E-03
102GO:0015713: phosphoglycerate transport3.72E-03
103GO:0015867: ATP transport3.72E-03
104GO:1901141: regulation of lignin biosynthetic process3.72E-03
105GO:0006874: cellular calcium ion homeostasis3.75E-03
106GO:0006099: tricarboxylic acid cycle3.79E-03
107GO:0009737: response to abscisic acid4.10E-03
108GO:0080167: response to karrikin4.16E-03
109GO:0050832: defense response to fungus4.34E-03
110GO:0006631: fatty acid metabolic process4.47E-03
111GO:0034052: positive regulation of plant-type hypersensitive response4.78E-03
112GO:0006097: glyoxylate cycle4.78E-03
113GO:0009229: thiamine diphosphate biosynthetic process4.78E-03
114GO:0009636: response to toxic substance5.75E-03
115GO:0015866: ADP transport5.92E-03
116GO:0006777: Mo-molybdopterin cofactor biosynthetic process5.92E-03
117GO:0010256: endomembrane system organization5.92E-03
118GO:0045040: protein import into mitochondrial outer membrane5.92E-03
119GO:1900425: negative regulation of defense response to bacterium5.92E-03
120GO:0033365: protein localization to organelle5.92E-03
121GO:0009228: thiamine biosynthetic process5.92E-03
122GO:0006014: D-ribose metabolic process5.92E-03
123GO:0006886: intracellular protein transport6.03E-03
124GO:0030643: cellular phosphate ion homeostasis7.16E-03
125GO:0045926: negative regulation of growth7.16E-03
126GO:0009942: longitudinal axis specification7.16E-03
127GO:0048444: floral organ morphogenesis7.16E-03
128GO:0006623: protein targeting to vacuole7.85E-03
129GO:0007275: multicellular organism development8.15E-03
130GO:0002229: defense response to oomycetes8.41E-03
131GO:0006635: fatty acid beta-oxidation8.41E-03
132GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway8.47E-03
133GO:0043090: amino acid import8.47E-03
134GO:1900056: negative regulation of leaf senescence8.47E-03
135GO:0000122: negative regulation of transcription from RNA polymerase II promoter8.47E-03
136GO:0006333: chromatin assembly or disassembly8.47E-03
137GO:1902074: response to salt8.47E-03
138GO:0010044: response to aluminum ion8.47E-03
139GO:0016559: peroxisome fission9.87E-03
140GO:0030091: protein repair9.87E-03
141GO:0009819: drought recovery9.87E-03
142GO:0009850: auxin metabolic process9.87E-03
143GO:0031540: regulation of anthocyanin biosynthetic process9.87E-03
144GO:0010208: pollen wall assembly1.13E-02
145GO:0006997: nucleus organization1.13E-02
146GO:0010204: defense response signaling pathway, resistance gene-independent1.13E-02
147GO:0017004: cytochrome complex assembly1.13E-02
148GO:0015780: nucleotide-sugar transport1.29E-02
149GO:0009835: fruit ripening1.29E-02
150GO:0007338: single fertilization1.29E-02
151GO:0019432: triglyceride biosynthetic process1.29E-02
152GO:0010029: regulation of seed germination1.29E-02
153GO:0009816: defense response to bacterium, incompatible interaction1.29E-02
154GO:0009056: catabolic process1.29E-02
155GO:0009627: systemic acquired resistance1.37E-02
156GO:0090332: stomatal closure1.45E-02
157GO:0008202: steroid metabolic process1.45E-02
158GO:0016311: dephosphorylation1.52E-02
159GO:0009641: shade avoidance1.62E-02
160GO:0010629: negative regulation of gene expression1.62E-02
161GO:0051555: flavonol biosynthetic process1.62E-02
162GO:0009870: defense response signaling pathway, resistance gene-dependent1.62E-02
163GO:0006032: chitin catabolic process1.62E-02
164GO:0019538: protein metabolic process1.62E-02
165GO:0009688: abscisic acid biosynthetic process1.62E-02
166GO:0009813: flavonoid biosynthetic process1.68E-02
167GO:0009407: toxin catabolic process1.77E-02
168GO:0019684: photosynthesis, light reaction1.80E-02
169GO:0009089: lysine biosynthetic process via diaminopimelate1.80E-02
170GO:0009682: induced systemic resistance1.80E-02
171GO:0052544: defense response by callose deposition in cell wall1.80E-02
172GO:0012501: programmed cell death1.98E-02
173GO:0002213: defense response to insect1.98E-02
174GO:0040008: regulation of growth2.16E-02
175GO:2000012: regulation of auxin polar transport2.17E-02
176GO:0006626: protein targeting to mitochondrion2.17E-02
177GO:0010102: lateral root morphogenesis2.17E-02
178GO:0007165: signal transduction2.22E-02
179GO:0006839: mitochondrial transport2.32E-02
180GO:0009225: nucleotide-sugar metabolic process2.56E-02
181GO:0046688: response to copper ion2.56E-02
182GO:0090351: seedling development2.56E-02
183GO:0009408: response to heat2.70E-02
184GO:0009414: response to water deprivation2.75E-02
185GO:0009863: salicylic acid mediated signaling pathway2.98E-02
186GO:0006289: nucleotide-excision repair2.98E-02
187GO:2000377: regulation of reactive oxygen species metabolic process2.98E-02
188GO:0009753: response to jasmonic acid3.00E-02
189GO:0006855: drug transmembrane transport3.06E-02
190GO:0031347: regulation of defense response3.17E-02
191GO:0006825: copper ion transport3.20E-02
192GO:0051302: regulation of cell division3.20E-02
193GO:0009695: jasmonic acid biosynthetic process3.20E-02
194GO:0006334: nucleosome assembly3.42E-02
195GO:0009269: response to desiccation3.42E-02
196GO:0016114: terpenoid biosynthetic process3.42E-02
197GO:0016998: cell wall macromolecule catabolic process3.42E-02
198GO:0009814: defense response, incompatible interaction3.65E-02
199GO:0016226: iron-sulfur cluster assembly3.65E-02
200GO:0031348: negative regulation of defense response3.65E-02
201GO:0006012: galactose metabolic process3.88E-02
202GO:0009693: ethylene biosynthetic process3.88E-02
203GO:0009625: response to insect3.88E-02
204GO:0006970: response to osmotic stress4.31E-02
205GO:0070417: cellular response to cold4.36E-02
206GO:0009626: plant-type hypersensitive response4.44E-02
207GO:0055114: oxidation-reduction process4.56E-02
208GO:0010118: stomatal movement4.61E-02
209GO:0042391: regulation of membrane potential4.61E-02
210GO:0009723: response to ethylene4.71E-02
211GO:0006520: cellular amino acid metabolic process4.86E-02
212GO:0010182: sugar mediated signaling pathway4.86E-02
RankGO TermAdjusted P value
1GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
2GO:0033759: flavone synthase activity0.00E+00
3GO:0097007: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity0.00E+00
4GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
5GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
6GO:0102867: molybdenum cofactor sulfurtransferase activity0.00E+00
7GO:0050334: thiaminase activity0.00E+00
8GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
9GO:0005046: KDEL sequence binding0.00E+00
10GO:0097008: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity0.00E+00
11GO:0005212: structural constituent of eye lens0.00E+00
12GO:0034338: short-chain carboxylesterase activity0.00E+00
13GO:0010178: IAA-amino acid conjugate hydrolase activity9.12E-05
14GO:0030247: polysaccharide binding3.56E-04
15GO:0102391: decanoate--CoA ligase activity4.50E-04
16GO:0004656: procollagen-proline 4-dioxygenase activity4.50E-04
17GO:0016229: steroid dehydrogenase activity5.40E-04
18GO:0010179: IAA-Ala conjugate hydrolase activity5.40E-04
19GO:2001227: quercitrin binding5.40E-04
20GO:0070401: NADP+ binding5.40E-04
21GO:2001147: camalexin binding5.40E-04
22GO:0009000: selenocysteine lyase activity5.40E-04
23GO:0015245: fatty acid transporter activity5.40E-04
24GO:0010285: L,L-diaminopimelate aminotransferase activity5.40E-04
25GO:0016920: pyroglutamyl-peptidase activity5.40E-04
26GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity5.40E-04
27GO:0008320: protein transmembrane transporter activity5.77E-04
28GO:0004467: long-chain fatty acid-CoA ligase activity5.77E-04
29GO:0047893: flavonol 3-O-glucosyltransferase activity7.18E-04
30GO:0004033: aldo-keto reductase (NADP) activity7.18E-04
31GO:0003994: aconitate hydratase activity1.16E-03
32GO:0015152: glucose-6-phosphate transmembrane transporter activity1.16E-03
33GO:0032934: sterol binding1.16E-03
34GO:0015036: disulfide oxidoreductase activity1.16E-03
35GO:0010331: gibberellin binding1.16E-03
36GO:0015297: antiporter activity1.21E-03
37GO:0008237: metallopeptidase activity1.62E-03
38GO:0005457: GDP-fucose transmembrane transporter activity1.91E-03
39GO:0008265: Mo-molybdopterin cofactor sulfurase activity1.91E-03
40GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.91E-03
41GO:0016531: copper chaperone activity1.91E-03
42GO:0032403: protein complex binding1.91E-03
43GO:0071917: triose-phosphate transmembrane transporter activity1.91E-03
44GO:0004806: triglyceride lipase activity2.32E-03
45GO:0004970: ionotropic glutamate receptor activity2.74E-03
46GO:0005217: intracellular ligand-gated ion channel activity2.74E-03
47GO:0017077: oxidative phosphorylation uncoupler activity2.76E-03
48GO:0035529: NADH pyrophosphatase activity2.76E-03
49GO:0030527: structural constituent of chromatin2.76E-03
50GO:0004449: isocitrate dehydrogenase (NAD+) activity2.76E-03
51GO:0005432: calcium:sodium antiporter activity2.76E-03
52GO:0008106: alcohol dehydrogenase (NADP+) activity2.76E-03
53GO:0005509: calcium ion binding3.35E-03
54GO:0031418: L-ascorbic acid binding3.40E-03
55GO:0001046: core promoter sequence-specific DNA binding3.40E-03
56GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.58E-03
57GO:0004834: tryptophan synthase activity3.72E-03
58GO:0046923: ER retention sequence binding3.72E-03
59GO:0003995: acyl-CoA dehydrogenase activity3.72E-03
60GO:0050378: UDP-glucuronate 4-epimerase activity3.72E-03
61GO:0015120: phosphoglycerate transmembrane transporter activity3.72E-03
62GO:0035251: UDP-glucosyltransferase activity4.13E-03
63GO:0030151: molybdenum ion binding4.78E-03
64GO:0004623: phospholipase A2 activity4.78E-03
65GO:0018685: alkane 1-monooxygenase activity4.78E-03
66GO:0003997: acyl-CoA oxidase activity4.78E-03
67GO:0005496: steroid binding4.78E-03
68GO:0047631: ADP-ribose diphosphatase activity4.78E-03
69GO:0000210: NAD+ diphosphatase activity5.92E-03
70GO:0008519: ammonium transmembrane transporter activity5.92E-03
71GO:0008194: UDP-glycosyltransferase activity6.65E-03
72GO:0015217: ADP transmembrane transporter activity7.16E-03
73GO:0033743: peptide-methionine (R)-S-oxide reductase activity7.16E-03
74GO:0004144: diacylglycerol O-acyltransferase activity7.16E-03
75GO:0004747: ribokinase activity7.16E-03
76GO:0005347: ATP transmembrane transporter activity7.16E-03
77GO:0003978: UDP-glucose 4-epimerase activity7.16E-03
78GO:0008113: peptide-methionine (S)-S-oxide reductase activity7.16E-03
79GO:0050662: coenzyme binding7.31E-03
80GO:0102425: myricetin 3-O-glucosyltransferase activity8.47E-03
81GO:0102360: daphnetin 3-O-glucosyltransferase activity8.47E-03
82GO:0043295: glutathione binding8.47E-03
83GO:0052747: sinapyl alcohol dehydrogenase activity9.87E-03
84GO:0005544: calcium-dependent phospholipid binding9.87E-03
85GO:0015491: cation:cation antiporter activity9.87E-03
86GO:0008865: fructokinase activity9.87E-03
87GO:0004714: transmembrane receptor protein tyrosine kinase activity9.87E-03
88GO:0080043: quercetin 3-O-glucosyltransferase activity1.02E-02
89GO:0080044: quercetin 7-O-glucosyltransferase activity1.02E-02
90GO:0016791: phosphatase activity1.02E-02
91GO:0005506: iron ion binding1.07E-02
92GO:0008483: transaminase activity1.09E-02
93GO:0008142: oxysterol binding1.13E-02
94GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.29E-02
95GO:0008375: acetylglucosaminyltransferase activity1.37E-02
96GO:0016758: transferase activity, transferring hexosyl groups1.47E-02
97GO:0019825: oxygen binding1.48E-02
98GO:0004568: chitinase activity1.62E-02
99GO:0004864: protein phosphatase inhibitor activity1.62E-02
100GO:0016301: kinase activity1.63E-02
101GO:0030170: pyridoxal phosphate binding1.74E-02
102GO:0045551: cinnamyl-alcohol dehydrogenase activity1.98E-02
103GO:0043565: sequence-specific DNA binding1.99E-02
104GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.09E-02
105GO:0003993: acid phosphatase activity2.12E-02
106GO:0042803: protein homodimerization activity2.12E-02
107GO:0004022: alcohol dehydrogenase (NAD) activity2.17E-02
108GO:0015266: protein channel activity2.17E-02
109GO:0005315: inorganic phosphate transmembrane transporter activity2.17E-02
110GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.22E-02
111GO:0004722: protein serine/threonine phosphatase activity2.27E-02
112GO:0051539: 4 iron, 4 sulfur cluster binding2.32E-02
113GO:0004364: glutathione transferase activity2.52E-02
114GO:0030552: cAMP binding2.56E-02
115GO:0030553: cGMP binding2.56E-02
116GO:0008061: chitin binding2.56E-02
117GO:0003712: transcription cofactor activity2.56E-02
118GO:0020037: heme binding2.86E-02
119GO:0005198: structural molecule activity2.95E-02
120GO:0051536: iron-sulfur cluster binding2.98E-02
121GO:0005216: ion channel activity3.20E-02
122GO:0004674: protein serine/threonine kinase activity3.65E-02
123GO:0008810: cellulase activity3.88E-02
124GO:0004499: N,N-dimethylaniline monooxygenase activity4.12E-02
125GO:0003682: chromatin binding4.22E-02
126GO:0005102: receptor binding4.36E-02
127GO:0005249: voltage-gated potassium channel activity4.61E-02
128GO:0030551: cyclic nucleotide binding4.61E-02
129GO:0016874: ligase activity4.72E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane6.62E-11
2GO:0005794: Golgi apparatus9.43E-05
3GO:0005789: endoplasmic reticulum membrane2.11E-04
4GO:0005801: cis-Golgi network4.50E-04
5GO:0045252: oxoglutarate dehydrogenase complex5.40E-04
6GO:0005743: mitochondrial inner membrane5.76E-04
7GO:0005783: endoplasmic reticulum5.91E-04
8GO:0005886: plasma membrane7.34E-04
9GO:0005901: caveola1.16E-03
10GO:0031314: extrinsic component of mitochondrial inner membrane1.16E-03
11GO:0030134: ER to Golgi transport vesicle1.16E-03
12GO:0017119: Golgi transport complex1.44E-03
13GO:0005802: trans-Golgi network2.32E-03
14GO:0030658: transport vesicle membrane2.76E-03
15GO:0005768: endosome3.16E-03
16GO:0005623: cell3.57E-03
17GO:0005741: mitochondrial outer membrane4.13E-03
18GO:0000813: ESCRT I complex4.78E-03
19GO:0000164: protein phosphatase type 1 complex4.78E-03
20GO:0031965: nuclear membrane7.85E-03
21GO:0009986: cell surface8.47E-03
22GO:0046658: anchored component of plasma membrane8.60E-03
23GO:0005777: peroxisome9.74E-03
24GO:0005779: integral component of peroxisomal membrane1.13E-02
25GO:0005742: mitochondrial outer membrane translocase complex1.13E-02
26GO:0005788: endoplasmic reticulum lumen1.29E-02
27GO:0030665: clathrin-coated vesicle membrane1.45E-02
28GO:0031225: anchored component of membrane1.76E-02
29GO:0031307: integral component of mitochondrial outer membrane1.98E-02
30GO:0009506: plasmodesma2.40E-02
31GO:0005795: Golgi stack2.56E-02
32GO:0005758: mitochondrial intermembrane space2.98E-02
33GO:0043231: intracellular membrane-bounded organelle3.12E-02
34GO:0005774: vacuolar membrane3.22E-02
35GO:0005744: mitochondrial inner membrane presequence translocase complex4.12E-02
36GO:0005887: integral component of plasma membrane4.22E-02
<
Gene type



Gene DE type