Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G39000

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010324: membrane invagination0.00E+00
2GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
3GO:0015690: aluminum cation transport0.00E+00
4GO:0010150: leaf senescence5.63E-06
5GO:0048508: embryonic meristem development8.78E-05
6GO:0051938: L-glutamate import8.78E-05
7GO:0019567: arabinose biosynthetic process8.78E-05
8GO:0010115: regulation of abscisic acid biosynthetic process2.08E-04
9GO:0015865: purine nucleotide transport2.08E-04
10GO:0010271: regulation of chlorophyll catabolic process2.08E-04
11GO:0043091: L-arginine import2.08E-04
12GO:0015802: basic amino acid transport2.08E-04
13GO:0009945: radial axis specification2.08E-04
14GO:2000377: regulation of reactive oxygen species metabolic process2.70E-04
15GO:0006468: protein phosphorylation2.85E-04
16GO:1900055: regulation of leaf senescence3.48E-04
17GO:0006954: inflammatory response3.48E-04
18GO:1900140: regulation of seedling development3.48E-04
19GO:0071456: cellular response to hypoxia3.60E-04
20GO:0006952: defense response4.30E-04
21GO:0042391: regulation of membrane potential4.99E-04
22GO:0046902: regulation of mitochondrial membrane permeability5.01E-04
23GO:0009646: response to absence of light5.76E-04
24GO:1901141: regulation of lignin biosynthetic process6.66E-04
25GO:0060548: negative regulation of cell death6.66E-04
26GO:0045227: capsule polysaccharide biosynthetic process6.66E-04
27GO:0045088: regulation of innate immune response6.66E-04
28GO:0033358: UDP-L-arabinose biosynthetic process6.66E-04
29GO:0010508: positive regulation of autophagy6.66E-04
30GO:0006979: response to oxidative stress7.97E-04
31GO:0009697: salicylic acid biosynthetic process8.44E-04
32GO:0009942: longitudinal axis specification1.23E-03
33GO:0071446: cellular response to salicylic acid stimulus1.44E-03
34GO:0050829: defense response to Gram-negative bacterium1.44E-03
35GO:0009061: anaerobic respiration1.66E-03
36GO:0009787: regulation of abscisic acid-activated signaling pathway1.66E-03
37GO:0009819: drought recovery1.66E-03
38GO:2000031: regulation of salicylic acid mediated signaling pathway1.89E-03
39GO:0090333: regulation of stomatal closure2.14E-03
40GO:0006855: drug transmembrane transport2.26E-03
41GO:0010380: regulation of chlorophyll biosynthetic process2.39E-03
42GO:0009737: response to abscisic acid2.94E-03
43GO:0012501: programmed cell death3.21E-03
44GO:0009414: response to water deprivation3.45E-03
45GO:0042742: defense response to bacterium3.58E-03
46GO:0009624: response to nematode3.69E-03
47GO:0010540: basipetal auxin transport3.80E-03
48GO:0009742: brassinosteroid mediated signaling pathway3.91E-03
49GO:0009225: nucleotide-sugar metabolic process4.10E-03
50GO:0010167: response to nitrate4.10E-03
51GO:0003333: amino acid transmembrane transport5.42E-03
52GO:0031348: negative regulation of defense response5.76E-03
53GO:0009625: response to insect6.12E-03
54GO:0006012: galactose metabolic process6.12E-03
55GO:0070417: cellular response to cold6.86E-03
56GO:0035556: intracellular signal transduction6.90E-03
57GO:0000271: polysaccharide biosynthetic process7.24E-03
58GO:0042631: cellular response to water deprivation7.24E-03
59GO:0006470: protein dephosphorylation7.26E-03
60GO:0007166: cell surface receptor signaling pathway7.26E-03
61GO:0045489: pectin biosynthetic process7.62E-03
62GO:0009749: response to glucose8.42E-03
63GO:0055085: transmembrane transport8.72E-03
64GO:0000302: response to reactive oxygen species8.83E-03
65GO:0009630: gravitropism9.24E-03
66GO:0007165: signal transduction1.09E-02
67GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.19E-02
68GO:0006950: response to stress1.28E-02
69GO:0008219: cell death1.38E-02
70GO:0009832: plant-type cell wall biogenesis1.43E-02
71GO:0010119: regulation of stomatal movement1.53E-02
72GO:0007568: aging1.53E-02
73GO:0009867: jasmonic acid mediated signaling pathway1.63E-02
74GO:0045087: innate immune response1.63E-02
75GO:0016051: carbohydrate biosynthetic process1.63E-02
76GO:0009751: response to salicylic acid1.78E-02
77GO:0006897: endocytosis1.84E-02
78GO:0048364: root development1.89E-02
79GO:0051707: response to other organism1.95E-02
80GO:0031347: regulation of defense response2.24E-02
81GO:0009409: response to cold2.31E-02
82GO:0009809: lignin biosynthetic process2.41E-02
83GO:0009620: response to fungus2.91E-02
84GO:0009738: abscisic acid-activated signaling pathway3.10E-02
85GO:0009611: response to wounding3.28E-02
86GO:0009790: embryo development4.06E-02
RankGO TermAdjusted P value
1GO:0019901: protein kinase binding2.95E-05
2GO:0016301: kinase activity7.02E-05
3GO:0019707: protein-cysteine S-acyltransferase activity8.78E-05
4GO:0001671: ATPase activator activity2.08E-04
5GO:0022821: potassium ion antiporter activity2.08E-04
6GO:0030552: cAMP binding2.16E-04
7GO:0030553: cGMP binding2.16E-04
8GO:0005216: ion channel activity2.99E-04
9GO:0016595: glutamate binding3.48E-04
10GO:0005249: voltage-gated potassium channel activity4.99E-04
11GO:0030551: cyclic nucleotide binding4.99E-04
12GO:0015189: L-lysine transmembrane transporter activity5.01E-04
13GO:0015181: arginine transmembrane transporter activity5.01E-04
14GO:0005524: ATP binding5.08E-04
15GO:0050373: UDP-arabinose 4-epimerase activity6.66E-04
16GO:0005313: L-glutamate transmembrane transporter activity6.66E-04
17GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity8.40E-04
18GO:0005471: ATP:ADP antiporter activity8.44E-04
19GO:0070696: transmembrane receptor protein serine/threonine kinase binding8.44E-04
20GO:0004674: protein serine/threonine kinase activity1.14E-03
21GO:0004012: phospholipid-translocating ATPase activity1.23E-03
22GO:0005261: cation channel activity1.23E-03
23GO:0003978: UDP-glucose 4-epimerase activity1.23E-03
24GO:0015238: drug transmembrane transporter activity1.26E-03
25GO:0004714: transmembrane receptor protein tyrosine kinase activity1.66E-03
26GO:0004033: aldo-keto reductase (NADP) activity1.66E-03
27GO:0015174: basic amino acid transmembrane transporter activity2.39E-03
28GO:0008171: O-methyltransferase activity2.65E-03
29GO:0008559: xenobiotic-transporting ATPase activity2.93E-03
30GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism3.50E-03
31GO:0003954: NADH dehydrogenase activity4.74E-03
32GO:0051087: chaperone binding5.07E-03
33GO:0033612: receptor serine/threonine kinase binding5.42E-03
34GO:0019706: protein-cysteine S-palmitoyltransferase activity5.42E-03
35GO:0004707: MAP kinase activity5.42E-03
36GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity5.76E-03
37GO:0004675: transmembrane receptor protein serine/threonine kinase activity5.92E-03
38GO:0015297: antiporter activity6.06E-03
39GO:0043531: ADP binding1.08E-02
40GO:0004721: phosphoprotein phosphatase activity1.28E-02
41GO:0004722: protein serine/threonine phosphatase activity1.61E-02
42GO:0005215: transporter activity1.79E-02
43GO:0003899: DNA-directed 5'-3' RNA polymerase activity2.41E-02
44GO:0016298: lipase activity2.47E-02
45GO:0004672: protein kinase activity2.56E-02
46GO:0015171: amino acid transmembrane transporter activity2.60E-02
47GO:0016758: transferase activity, transferring hexosyl groups3.57E-02
48GO:0030246: carbohydrate binding4.30E-02
49GO:0005507: copper ion binding4.55E-02
50GO:0005516: calmodulin binding4.80E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane5.99E-09
2GO:0016021: integral component of membrane7.05E-07
3GO:0000138: Golgi trans cisterna8.78E-05
4GO:0005901: caveola2.08E-04
5GO:0031304: intrinsic component of mitochondrial inner membrane2.08E-04
6GO:0008287: protein serine/threonine phosphatase complex3.48E-04
7GO:0005740: mitochondrial envelope2.65E-03
8GO:0005769: early endosome4.42E-03
9GO:0005777: peroxisome7.67E-03
10GO:0032580: Golgi cisterna membrane1.01E-02
11GO:0000325: plant-type vacuole1.53E-02
12GO:0000786: nucleosome1.58E-02
13GO:0031966: mitochondrial membrane2.29E-02
14GO:0005774: vacuolar membrane2.33E-02
15GO:0005887: integral component of plasma membrane2.45E-02
16GO:0005834: heterotrimeric G-protein complex2.84E-02
17GO:0009705: plant-type vacuole membrane4.58E-02
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Gene type



Gene DE type