co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G38530

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1902009: positive regulation of toxin transport	0.00E+00
2	GO:2000068: regulation of defense response to insect	0.00E+00
3	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
4	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
5	GO:0005993: trehalose catabolic process	0.00E+00
6	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
7	GO:0052386: cell wall thickening	0.00E+00
8	GO:0043619: regulation of transcription from RNA polymerase II promoter in response to oxidative stress	0.00E+00
9	GO:0080149: sucrose induced translational repression	0.00E+00
10	GO:0097250: mitochondrial respiratory chain supercomplex assembly	0.00E+00
11	GO:0010407: non-classical arabinogalactan protein metabolic process	0.00E+00
12	GO:0006623: protein targeting to vacuole	1.43E-04
13	GO:0006605: protein targeting	1.51E-04
14	GO:0051090: regulation of sequence-specific DNA binding transcription factor activity	1.88E-04
15	GO:1903648: positive regulation of chlorophyll catabolic process	1.88E-04
16	GO:0000077: DNA damage checkpoint	1.88E-04
17	GO:0042350: GDP-L-fucose biosynthetic process	1.88E-04
18	GO:1990641: response to iron ion starvation	1.88E-04
19	GO:0019478: D-amino acid catabolic process	1.88E-04
20	GO:0008202: steroid metabolic process	2.73E-04
21	GO:0006597: spermine biosynthetic process	4.24E-04
22	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.24E-04
23	GO:0006568: tryptophan metabolic process	4.24E-04
24	GO:0042853: L-alanine catabolic process	4.24E-04
25	GO:0040020: regulation of meiotic nuclear division	4.24E-04
26	GO:0006101: citrate metabolic process	4.24E-04
27	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	6.92E-04
28	GO:0006065: UDP-glucuronate biosynthetic process	6.92E-04
29	GO:0032504: multicellular organism reproduction	6.92E-04
30	GO:0009410: response to xenobiotic stimulus	6.92E-04
31	GO:0052546: cell wall pectin metabolic process	6.92E-04
32	GO:0030150: protein import into mitochondrial matrix	7.52E-04
33	GO:0055070: copper ion homeostasis	9.86E-04
34	GO:0001676: long-chain fatty acid metabolic process	9.86E-04
35	GO:0051639: actin filament network formation	9.86E-04
36	GO:0072334: UDP-galactose transmembrane transport	9.86E-04
37	GO:0009963: positive regulation of flavonoid biosynthetic process	9.86E-04
38	GO:0009226: nucleotide-sugar biosynthetic process	9.86E-04
39	GO:0010731: protein glutathionylation	9.86E-04
40	GO:0051764: actin crosslink formation	1.31E-03
41	GO:1902584: positive regulation of response to water deprivation	1.31E-03
42	GO:0006621: protein retention in ER lumen	1.31E-03
43	GO:0009738: abscisic acid-activated signaling pathway	1.37E-03
44	GO:0007275: multicellular organism development	1.59E-03
45	GO:0006097: glyoxylate cycle	1.66E-03
46	GO:0009229: thiamine diphosphate biosynthetic process	1.66E-03
47	GO:0045927: positive regulation of growth	1.66E-03
48	GO:0006596: polyamine biosynthetic process	2.05E-03
49	GO:0006014: D-ribose metabolic process	2.05E-03
50	GO:0009759: indole glucosinolate biosynthetic process	2.05E-03
51	GO:0009228: thiamine biosynthetic process	2.05E-03
52	GO:1900425: negative regulation of defense response to bacterium	2.05E-03
53	GO:0017148: negative regulation of translation	2.46E-03
54	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.46E-03
55	GO:0030643: cellular phosphate ion homeostasis	2.46E-03
56	GO:0034389: lipid particle organization	2.46E-03
57	GO:0010044: response to aluminum ion	2.90E-03
58	GO:0006744: ubiquinone biosynthetic process	2.90E-03
59	GO:0080186: developmental vegetative growth	2.90E-03
60	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.90E-03
61	GO:1900057: positive regulation of leaf senescence	2.90E-03
62	GO:0045010: actin nucleation	3.36E-03
63	GO:0006102: isocitrate metabolic process	3.36E-03
64	GO:0016559: peroxisome fission	3.36E-03
65	GO:0007155: cell adhesion	3.36E-03
66	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.36E-03
67	GO:0010417: glucuronoxylan biosynthetic process	3.84E-03
68	GO:0030968: endoplasmic reticulum unfolded protein response	3.84E-03
69	GO:0000902: cell morphogenesis	4.35E-03
70	GO:0007338: single fertilization	4.35E-03
71	GO:0010332: response to gamma radiation	4.35E-03
72	GO:0090332: stomatal closure	4.87E-03
73	GO:0009086: methionine biosynthetic process	4.87E-03
74	GO:0006631: fatty acid metabolic process	5.05E-03
75	GO:0000103: sulfate assimilation	5.42E-03
76	GO:0051707: response to other organism	5.48E-03
77	GO:0000266: mitochondrial fission	6.58E-03
78	GO:0045037: protein import into chloroplast stroma	6.58E-03
79	GO:0009846: pollen germination	6.88E-03
80	GO:0030036: actin cytoskeleton organization	7.19E-03
81	GO:2000012: regulation of auxin polar transport	7.19E-03
82	GO:0015031: protein transport	7.63E-03
83	GO:0010224: response to UV-B	7.64E-03
84	GO:0016192: vesicle-mediated transport	7.71E-03
85	GO:0007015: actin filament organization	7.82E-03
86	GO:0034605: cellular response to heat	7.82E-03
87	GO:0002237: response to molecule of bacterial origin	7.82E-03
88	GO:0007033: vacuole organization	8.47E-03
89	GO:0006886: intracellular protein transport	9.45E-03
90	GO:0006511: ubiquitin-dependent protein catabolic process	9.73E-03
91	GO:0051017: actin filament bundle assembly	9.83E-03
92	GO:0006289: nucleotide-excision repair	9.83E-03
93	GO:0000027: ribosomal large subunit assembly	9.83E-03
94	GO:0009863: salicylic acid mediated signaling pathway	9.83E-03
95	GO:0008299: isoprenoid biosynthetic process	1.05E-02
96	GO:0006334: nucleosome assembly	1.13E-02
97	GO:0019915: lipid storage	1.13E-02
98	GO:0009269: response to desiccation	1.13E-02
99	GO:0031348: negative regulation of defense response	1.20E-02
100	GO:0009814: defense response, incompatible interaction	1.20E-02
101	GO:0009411: response to UV	1.28E-02
102	GO:0010584: pollen exine formation	1.35E-02
103	GO:0009058: biosynthetic process	1.39E-02
104	GO:0010051: xylem and phloem pattern formation	1.51E-02
105	GO:0006662: glycerol ether metabolic process	1.60E-02
106	GO:0045489: pectin biosynthetic process	1.60E-02
107	GO:0019252: starch biosynthetic process	1.77E-02
108	GO:0010193: response to ozone	1.85E-02
109	GO:0032502: developmental process	1.94E-02
110	GO:0016032: viral process	1.94E-02
111	GO:0030163: protein catabolic process	2.03E-02
112	GO:0006470: protein dephosphorylation	2.09E-02
113	GO:0009567: double fertilization forming a zygote and endosperm	2.13E-02
114	GO:0008380: RNA splicing	2.18E-02
115	GO:0001666: response to hypoxia	2.41E-02
116	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.51E-02
117	GO:0009816: defense response to bacterium, incompatible interaction	2.51E-02
118	GO:0006906: vesicle fusion	2.61E-02
119	GO:0016311: dephosphorylation	2.81E-02
120	GO:0045893: positive regulation of transcription, DNA-templated	2.91E-02
121	GO:0048767: root hair elongation	3.02E-02
122	GO:0009860: pollen tube growth	3.04E-02
123	GO:0006499: N-terminal protein myristoylation	3.12E-02
124	GO:0000724: double-strand break repair via homologous recombination	3.34E-02
125	GO:0006457: protein folding	3.38E-02
126	GO:0016051: carbohydrate biosynthetic process	3.45E-02
127	GO:0009867: jasmonic acid mediated signaling pathway	3.45E-02
128	GO:0034599: cellular response to oxidative stress	3.56E-02
129	GO:0006099: tricarboxylic acid cycle	3.56E-02
130	GO:0006887: exocytosis	3.89E-02
131	GO:0042542: response to hydrogen peroxide	4.01E-02
132	GO:0010114: response to red light	4.13E-02
133	GO:0009744: response to sucrose	4.13E-02
134	GO:0000209: protein polyubiquitination	4.24E-02
135	GO:0009636: response to toxic substance	4.48E-02
136	GO:0006869: lipid transport	4.58E-02
137	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0050334: thiaminase activity	0.00E+00
2	GO:0005046: KDEL sequence binding	0.00E+00
3	GO:0061133: endopeptidase activator activity	0.00E+00
4	GO:0051499: D-aminoacyl-tRNA deacylase activity	0.00E+00
5	GO:0034338: short-chain carboxylesterase activity	0.00E+00
6	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
7	GO:0047150: betaine-homocysteine S-methyltransferase activity	1.88E-04
8	GO:0016768: spermine synthase activity	1.88E-04
9	GO:0016920: pyroglutamyl-peptidase activity	1.88E-04
10	GO:0050577: GDP-L-fucose synthase activity	1.88E-04
11	GO:0008142: oxysterol binding	1.88E-04
12	GO:0015927: trehalase activity	1.88E-04
13	GO:0030942: endoplasmic reticulum signal peptide binding	1.88E-04
14	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	1.88E-04
15	GO:0003994: aconitate hydratase activity	4.24E-04
16	GO:0004766: spermidine synthase activity	4.24E-04
17	GO:0050347: trans-octaprenyltranstransferase activity	4.24E-04
18	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	4.24E-04
19	GO:0000774: adenyl-nucleotide exchange factor activity	4.24E-04
20	GO:0032934: sterol binding	4.24E-04
21	GO:0048531: beta-1,3-galactosyltransferase activity	4.24E-04
22	GO:0045174: glutathione dehydrogenase (ascorbate) activity	6.92E-04
23	GO:0003979: UDP-glucose 6-dehydrogenase activity	6.92E-04
24	GO:0000975: regulatory region DNA binding	6.92E-04
25	GO:0005460: UDP-glucose transmembrane transporter activity	9.86E-04
26	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	9.86E-04
27	GO:0035529: NADH pyrophosphatase activity	9.86E-04
28	GO:0004659: prenyltransferase activity	1.31E-03
29	GO:0046923: ER retention sequence binding	1.31E-03
30	GO:0070628: proteasome binding	1.31E-03
31	GO:0047631: ADP-ribose diphosphatase activity	1.66E-03
32	GO:0005459: UDP-galactose transmembrane transporter activity	1.66E-03
33	GO:0004623: phospholipase A2 activity	1.66E-03
34	GO:0000210: NAD+ diphosphatase activity	2.05E-03
35	GO:0004656: procollagen-proline 4-dioxygenase activity	2.46E-03
36	GO:0102391: decanoate--CoA ligase activity	2.46E-03
37	GO:0004747: ribokinase activity	2.46E-03
38	GO:0008320: protein transmembrane transporter activity	2.90E-03
39	GO:0043295: glutathione binding	2.90E-03
40	GO:0004467: long-chain fatty acid-CoA ligase activity	2.90E-03
41	GO:0008312: 7S RNA binding	3.36E-03
42	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.36E-03
43	GO:0008865: fructokinase activity	3.36E-03
44	GO:0052747: sinapyl alcohol dehydrogenase activity	3.36E-03
45	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	4.35E-03
46	GO:0030234: enzyme regulator activity	5.42E-03
47	GO:0004161: dimethylallyltranstransferase activity	5.99E-03
48	GO:0045551: cinnamyl-alcohol dehydrogenase activity	6.58E-03
49	GO:0008378: galactosyltransferase activity	6.58E-03
50	GO:0051287: NAD binding	6.63E-03
51	GO:0004175: endopeptidase activity	7.82E-03
52	GO:0003712: transcription cofactor activity	8.47E-03
53	GO:0004725: protein tyrosine phosphatase activity	9.14E-03
54	GO:0031418: L-ascorbic acid binding	9.83E-03
55	GO:0043130: ubiquitin binding	9.83E-03
56	GO:0051082: unfolded protein binding	1.05E-02
57	GO:0051087: chaperone binding	1.05E-02
58	GO:0004298: threonine-type endopeptidase activity	1.13E-02
59	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.20E-02
60	GO:0016758: transferase activity, transferring hexosyl groups	1.28E-02
61	GO:0047134: protein-disulfide reductase activity	1.43E-02
62	GO:0005102: receptor binding	1.43E-02
63	GO:0005509: calcium ion binding	1.57E-02
64	GO:0004791: thioredoxin-disulfide reductase activity	1.68E-02
65	GO:0016853: isomerase activity	1.68E-02
66	GO:0050662: coenzyme binding	1.68E-02
67	GO:0004872: receptor activity	1.77E-02
68	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.03E-02
69	GO:0051015: actin filament binding	2.03E-02
70	GO:0016791: phosphatase activity	2.13E-02
71	GO:0008483: transaminase activity	2.22E-02
72	GO:0004806: triglyceride lipase activity	2.71E-02
73	GO:0030247: polysaccharide binding	2.71E-02
74	GO:0004222: metalloendopeptidase activity	3.12E-02
75	GO:0043565: sequence-specific DNA binding	3.23E-02
76	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.45E-02
77	GO:0003746: translation elongation factor activity	3.45E-02
78	GO:0003993: acid phosphatase activity	3.56E-02
79	GO:0000149: SNARE binding	3.67E-02
80	GO:0051539: 4 iron, 4 sulfur cluster binding	3.78E-02
81	GO:0005507: copper ion binding	3.80E-02
82	GO:0004364: glutathione transferase activity	4.01E-02
83	GO:0005484: SNAP receptor activity	4.13E-02
84	GO:0051537: 2 iron, 2 sulfur cluster binding	4.36E-02
85	GO:0004722: protein serine/threonine phosphatase activity	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0005801: cis-Golgi network	8.84E-05
2	GO:0001405: presequence translocase-associated import motor	1.88E-04
3	GO:0030665: clathrin-coated vesicle membrane	2.73E-04
4	GO:0017119: Golgi transport complex	3.21E-04
5	GO:0030134: ER to Golgi transport vesicle	4.24E-04
6	GO:0031902: late endosome membrane	6.35E-04
7	GO:0005737: cytoplasm	7.88E-04
8	GO:0032432: actin filament bundle	9.86E-04
9	GO:0030658: transport vesicle membrane	9.86E-04
10	GO:0005885: Arp2/3 protein complex	2.46E-03
11	GO:0030173: integral component of Golgi membrane	2.46E-03
12	GO:0005788: endoplasmic reticulum lumen	2.73E-03
13	GO:0009986: cell surface	2.90E-03
14	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	3.84E-03
15	GO:0005811: lipid particle	3.84E-03
16	GO:0031901: early endosome membrane	4.35E-03
17	GO:0008540: proteasome regulatory particle, base subcomplex	4.87E-03
18	GO:0005774: vacuolar membrane	5.45E-03
19	GO:0008541: proteasome regulatory particle, lid subcomplex	5.99E-03
20	GO:0005884: actin filament	5.99E-03
21	GO:0000502: proteasome complex	7.38E-03
22	GO:0030176: integral component of endoplasmic reticulum membrane	8.47E-03
23	GO:0005829: cytosol	8.70E-03
24	GO:0005783: endoplasmic reticulum	9.63E-03
25	GO:0005789: endoplasmic reticulum membrane	1.05E-02
26	GO:0005741: mitochondrial outer membrane	1.13E-02
27	GO:0005839: proteasome core complex	1.13E-02
28	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.35E-02
29	GO:0005623: cell	1.36E-02
30	GO:0005794: Golgi apparatus	1.75E-02
31	GO:0016592: mediator complex	1.94E-02
32	GO:0005778: peroxisomal membrane	2.22E-02
33	GO:0000139: Golgi membrane	2.78E-02
34	GO:0016021: integral component of membrane	3.05E-02
35	GO:0000325: plant-type vacuole	3.23E-02
36	GO:0031201: SNARE complex	3.89E-02
37	GO:0005743: mitochondrial inner membrane	4.79E-02