co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G38290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0030155: regulation of cell adhesion	0.00E+00
2	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
3	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
4	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
5	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
6	GO:0018131: oxazole or thiazole biosynthetic process	0.00E+00
7	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
8	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
9	GO:0008298: intracellular mRNA localization	0.00E+00
10	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
11	GO:0009715: chalcone biosynthetic process	0.00E+00
12	GO:1902326: positive regulation of chlorophyll biosynthetic process	0.00E+00
13	GO:0071474: cellular hyperosmotic response	0.00E+00
14	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
15	GO:0042371: vitamin K biosynthetic process	0.00E+00
16	GO:0042821: pyridoxal biosynthetic process	0.00E+00
17	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
18	GO:0006399: tRNA metabolic process	0.00E+00
19	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
20	GO:0015882: L-ascorbic acid transport	0.00E+00
21	GO:0007172: signal complex assembly	0.00E+00
22	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
23	GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process	0.00E+00
24	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
25	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
26	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
27	GO:0017038: protein import	0.00E+00
28	GO:0090279: regulation of calcium ion import	0.00E+00
29	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
30	GO:0043488: regulation of mRNA stability	0.00E+00
31	GO:0042820: vitamin B6 catabolic process	0.00E+00
32	GO:0009658: chloroplast organization	3.65E-14
33	GO:0010027: thylakoid membrane organization	9.80E-09
34	GO:2001141: regulation of RNA biosynthetic process	1.45E-06
35	GO:0071482: cellular response to light stimulus	2.43E-06
36	GO:0015995: chlorophyll biosynthetic process	7.55E-06
37	GO:0015979: photosynthesis	8.59E-06
38	GO:0045038: protein import into chloroplast thylakoid membrane	8.90E-06
39	GO:1901259: chloroplast rRNA processing	2.76E-05
40	GO:0032502: developmental process	3.03E-05
41	GO:0005977: glycogen metabolic process	6.75E-05
42	GO:0032544: plastid translation	8.56E-05
43	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.40E-04
44	GO:0010239: chloroplast mRNA processing	1.40E-04
45	GO:0006352: DNA-templated transcription, initiation	2.31E-04
46	GO:0009773: photosynthetic electron transport in photosystem I	2.31E-04
47	GO:0010021: amylopectin biosynthetic process	2.38E-04
48	GO:0006021: inositol biosynthetic process	2.38E-04
49	GO:0009765: photosynthesis, light harvesting	2.38E-04
50	GO:0009791: post-embryonic development	2.47E-04
51	GO:0009767: photosynthetic electron transport chain	3.34E-04
52	GO:0010236: plastoquinone biosynthetic process	3.57E-04
53	GO:0010020: chloroplast fission	3.94E-04
54	GO:0009228: thiamine biosynthetic process	4.97E-04
55	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	4.97E-04
56	GO:0010189: vitamin E biosynthetic process	6.58E-04
57	GO:0042372: phylloquinone biosynthetic process	6.58E-04
58	GO:0043266: regulation of potassium ion transport	6.97E-04
59	GO:0010063: positive regulation of trichoblast fate specification	6.97E-04
60	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	6.97E-04
61	GO:0000481: maturation of 5S rRNA	6.97E-04
62	GO:0006659: phosphatidylserine biosynthetic process	6.97E-04
63	GO:0065002: intracellular protein transmembrane transport	6.97E-04
64	GO:0043686: co-translational protein modification	6.97E-04
65	GO:0071461: cellular response to redox state	6.97E-04
66	GO:2000021: regulation of ion homeostasis	6.97E-04
67	GO:0043953: protein transport by the Tat complex	6.97E-04
68	GO:0051775: response to redox state	6.97E-04
69	GO:1902458: positive regulation of stomatal opening	6.97E-04
70	GO:0010028: xanthophyll cycle	6.97E-04
71	GO:0034337: RNA folding	6.97E-04
72	GO:0000476: maturation of 4.5S rRNA	6.97E-04
73	GO:0009443: pyridoxal 5'-phosphate salvage	6.97E-04
74	GO:0000967: rRNA 5'-end processing	6.97E-04
75	GO:0005991: trehalose metabolic process	6.97E-04
76	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	6.97E-04
77	GO:0031426: polycistronic mRNA processing	6.97E-04
78	GO:0009772: photosynthetic electron transport in photosystem II	8.40E-04
79	GO:0006605: protein targeting	1.04E-03
80	GO:0042255: ribosome assembly	1.04E-03
81	GO:0006353: DNA-templated transcription, termination	1.04E-03
82	GO:0048564: photosystem I assembly	1.04E-03
83	GO:0009657: plastid organization	1.27E-03
84	GO:0009958: positive gravitropism	1.46E-03
85	GO:0010541: acropetal auxin transport	1.50E-03
86	GO:0018026: peptidyl-lysine monomethylation	1.50E-03
87	GO:0060151: peroxisome localization	1.50E-03
88	GO:0000256: allantoin catabolic process	1.50E-03
89	GO:0051645: Golgi localization	1.50E-03
90	GO:0060359: response to ammonium ion	1.50E-03
91	GO:1904143: positive regulation of carotenoid biosynthetic process	1.50E-03
92	GO:0034755: iron ion transmembrane transport	1.50E-03
93	GO:0071457: cellular response to ozone	1.50E-03
94	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.50E-03
95	GO:0009629: response to gravity	1.50E-03
96	GO:0010024: phytochromobilin biosynthetic process	1.50E-03
97	GO:0080005: photosystem stoichiometry adjustment	1.50E-03
98	GO:0051262: protein tetramerization	1.50E-03
99	GO:0034470: ncRNA processing	1.50E-03
100	GO:0019252: starch biosynthetic process	1.76E-03
101	GO:0008654: phospholipid biosynthetic process	1.76E-03
102	GO:0006779: porphyrin-containing compound biosynthetic process	1.80E-03
103	GO:0009416: response to light stimulus	1.92E-03
104	GO:0006782: protoporphyrinogen IX biosynthetic process	2.11E-03
105	GO:0055114: oxidation-reduction process	2.38E-03
106	GO:0019684: photosynthesis, light reaction	2.44E-03
107	GO:0043085: positive regulation of catalytic activity	2.44E-03
108	GO:0048281: inflorescence morphogenesis	2.48E-03
109	GO:0090436: leaf pavement cell development	2.48E-03
110	GO:0006788: heme oxidation	2.48E-03
111	GO:0051646: mitochondrion localization	2.48E-03
112	GO:0010160: formation of animal organ boundary	2.48E-03
113	GO:0043157: response to cation stress	2.48E-03
114	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	2.48E-03
115	GO:0006954: inflammatory response	2.48E-03
116	GO:0010136: ureide catabolic process	2.48E-03
117	GO:0034051: negative regulation of plant-type hypersensitive response	2.48E-03
118	GO:0016024: CDP-diacylglycerol biosynthetic process	2.80E-03
119	GO:0009409: response to cold	3.49E-03
120	GO:0048467: gynoecium development	3.60E-03
121	GO:0010207: photosystem II assembly	3.60E-03
122	GO:0006168: adenine salvage	3.61E-03
123	GO:0043481: anthocyanin accumulation in tissues in response to UV light	3.61E-03
124	GO:0043572: plastid fission	3.61E-03
125	GO:0006145: purine nucleobase catabolic process	3.61E-03
126	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	3.61E-03
127	GO:0051016: barbed-end actin filament capping	3.61E-03
128	GO:0090308: regulation of methylation-dependent chromatin silencing	3.61E-03
129	GO:0010148: transpiration	3.61E-03
130	GO:0016556: mRNA modification	3.61E-03
131	GO:0006166: purine ribonucleoside salvage	3.61E-03
132	GO:0010071: root meristem specification	3.61E-03
133	GO:0009052: pentose-phosphate shunt, non-oxidative branch	3.61E-03
134	GO:0071484: cellular response to light intensity	3.61E-03
135	GO:0009226: nucleotide-sugar biosynthetic process	3.61E-03
136	GO:0010731: protein glutathionylation	3.61E-03
137	GO:0009152: purine ribonucleotide biosynthetic process	3.61E-03
138	GO:0046739: transport of virus in multicellular host	3.61E-03
139	GO:0046653: tetrahydrofolate metabolic process	3.61E-03
140	GO:0006107: oxaloacetate metabolic process	3.61E-03
141	GO:0019853: L-ascorbic acid biosynthetic process	4.04E-03
142	GO:0018298: protein-chromophore linkage	4.35E-03
143	GO:0005975: carbohydrate metabolic process	4.77E-03
144	GO:0006109: regulation of carbohydrate metabolic process	4.87E-03
145	GO:0006734: NADH metabolic process	4.87E-03
146	GO:0022622: root system development	4.87E-03
147	GO:0010109: regulation of photosynthesis	4.87E-03
148	GO:0010107: potassium ion import	4.87E-03
149	GO:2000122: negative regulation of stomatal complex development	4.87E-03
150	GO:0071486: cellular response to high light intensity	4.87E-03
151	GO:0006546: glycine catabolic process	4.87E-03
152	GO:0006661: phosphatidylinositol biosynthetic process	4.87E-03
153	GO:0048527: lateral root development	5.24E-03
154	GO:0007017: microtubule-based process	5.54E-03
155	GO:0009637: response to blue light	5.89E-03
156	GO:0032543: mitochondrial translation	6.27E-03
157	GO:0098719: sodium ion import across plasma membrane	6.27E-03
158	GO:0006465: signal peptide processing	6.27E-03
159	GO:0006564: L-serine biosynthetic process	6.27E-03
160	GO:0010375: stomatal complex patterning	6.27E-03
161	GO:0000278: mitotic cell cycle	6.27E-03
162	GO:0071493: cellular response to UV-B	6.27E-03
163	GO:0031365: N-terminal protein amino acid modification	6.27E-03
164	GO:0009107: lipoate biosynthetic process	6.27E-03
165	GO:0080110: sporopollenin biosynthetic process	6.27E-03
166	GO:0044209: AMP salvage	6.27E-03
167	GO:0006730: one-carbon metabolic process	6.68E-03
168	GO:0016554: cytidine to uridine editing	7.79E-03
169	GO:0050665: hydrogen peroxide biosynthetic process	7.79E-03
170	GO:0032973: amino acid export	7.79E-03
171	GO:0000741: karyogamy	7.79E-03
172	GO:0046855: inositol phosphate dephosphorylation	7.79E-03
173	GO:0006655: phosphatidylglycerol biosynthetic process	7.79E-03
174	GO:0060918: auxin transport	7.79E-03
175	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	7.79E-03
176	GO:0009959: negative gravitropism	7.79E-03
177	GO:0009306: protein secretion	7.95E-03
178	GO:0010114: response to red light	8.17E-03
179	GO:0009926: auxin polar transport	8.17E-03
180	GO:0048280: vesicle fusion with Golgi apparatus	9.42E-03
181	GO:0009854: oxidative photosynthetic carbon pathway	9.42E-03
182	GO:0010019: chloroplast-nucleus signaling pathway	9.42E-03
183	GO:0080086: stamen filament development	9.42E-03
184	GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity	9.42E-03
185	GO:0009955: adaxial/abaxial pattern specification	9.42E-03
186	GO:0017148: negative regulation of translation	9.42E-03
187	GO:0010182: sugar mediated signaling pathway	1.01E-02
188	GO:0009646: response to absence of light	1.08E-02
189	GO:1900056: negative regulation of leaf senescence	1.12E-02
190	GO:0051693: actin filament capping	1.12E-02
191	GO:0006400: tRNA modification	1.12E-02
192	GO:0048437: floral organ development	1.12E-02
193	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.12E-02
194	GO:0010103: stomatal complex morphogenesis	1.12E-02
195	GO:0009769: photosynthesis, light harvesting in photosystem II	1.12E-02
196	GO:0032880: regulation of protein localization	1.12E-02
197	GO:0010374: stomatal complex development	1.12E-02
198	GO:0070370: cellular heat acclimation	1.12E-02
199	GO:0009395: phospholipid catabolic process	1.12E-02
200	GO:0043090: amino acid import	1.12E-02
201	GO:0009645: response to low light intensity stimulus	1.12E-02
202	GO:0010078: maintenance of root meristem identity	1.30E-02
203	GO:0032508: DNA duplex unwinding	1.30E-02
204	GO:2000070: regulation of response to water deprivation	1.30E-02
205	GO:0031540: regulation of anthocyanin biosynthetic process	1.30E-02
206	GO:0055075: potassium ion homeostasis	1.30E-02
207	GO:0046620: regulation of organ growth	1.30E-02
208	GO:0070413: trehalose metabolism in response to stress	1.30E-02
209	GO:0052543: callose deposition in cell wall	1.30E-02
210	GO:0016559: peroxisome fission	1.30E-02
211	GO:0007155: cell adhesion	1.30E-02
212	GO:0009690: cytokinin metabolic process	1.30E-02
213	GO:0010090: trichome morphogenesis	1.42E-02
214	GO:0010204: defense response signaling pathway, resistance gene-independent	1.50E-02
215	GO:0007186: G-protein coupled receptor signaling pathway	1.50E-02
216	GO:0010497: plasmodesmata-mediated intercellular transport	1.50E-02
217	GO:0043562: cellular response to nitrogen levels	1.50E-02
218	GO:0017004: cytochrome complex assembly	1.50E-02
219	GO:0001558: regulation of cell growth	1.50E-02
220	GO:0019430: removal of superoxide radicals	1.50E-02
221	GO:0010052: guard cell differentiation	1.50E-02
222	GO:0015996: chlorophyll catabolic process	1.50E-02
223	GO:0048367: shoot system development	1.55E-02
224	GO:0048507: meristem development	1.70E-02
225	GO:0000902: cell morphogenesis	1.70E-02
226	GO:0009821: alkaloid biosynthetic process	1.70E-02
227	GO:0080144: amino acid homeostasis	1.70E-02
228	GO:0098656: anion transmembrane transport	1.70E-02
229	GO:0090333: regulation of stomatal closure	1.70E-02
230	GO:0046916: cellular transition metal ion homeostasis	1.70E-02
231	GO:1900865: chloroplast RNA modification	1.92E-02
232	GO:0010380: regulation of chlorophyll biosynthetic process	1.92E-02
233	GO:0051453: regulation of intracellular pH	1.92E-02
234	GO:0007346: regulation of mitotic cell cycle	1.92E-02
235	GO:0009638: phototropism	1.92E-02
236	GO:0009627: systemic acquired resistance	2.03E-02
237	GO:0006896: Golgi to vacuole transport	2.14E-02
238	GO:0045036: protein targeting to chloroplast	2.14E-02
239	GO:0006879: cellular iron ion homeostasis	2.38E-02
240	GO:0018119: peptidyl-cysteine S-nitrosylation	2.38E-02
241	GO:0006415: translational termination	2.38E-02
242	GO:0010216: maintenance of DNA methylation	2.38E-02
243	GO:0009684: indoleacetic acid biosynthetic process	2.38E-02
244	GO:0009089: lysine biosynthetic process via diaminopimelate	2.38E-02
245	GO:0006810: transport	2.45E-02
246	GO:0009813: flavonoid biosynthetic process	2.49E-02
247	GO:0010218: response to far red light	2.62E-02
248	GO:0045037: protein import into chloroplast stroma	2.62E-02
249	GO:0008361: regulation of cell size	2.62E-02
250	GO:0006790: sulfur compound metabolic process	2.62E-02
251	GO:0006108: malate metabolic process	2.87E-02
252	GO:0010588: cotyledon vascular tissue pattern formation	2.87E-02
253	GO:2000012: regulation of auxin polar transport	2.87E-02
254	GO:0030036: actin cytoskeleton organization	2.87E-02
255	GO:0009718: anthocyanin-containing compound biosynthetic process	2.87E-02
256	GO:0030048: actin filament-based movement	2.87E-02
257	GO:0010628: positive regulation of gene expression	2.87E-02
258	GO:0009790: embryo development	3.03E-02
259	GO:0007015: actin filament organization	3.13E-02
260	GO:0010143: cutin biosynthetic process	3.13E-02
261	GO:0010540: basipetal auxin transport	3.13E-02
262	GO:0009934: regulation of meristem structural organization	3.13E-02
263	GO:0009793: embryo development ending in seed dormancy	3.15E-02
264	GO:0010030: positive regulation of seed germination	3.39E-02
265	GO:0046854: phosphatidylinositol phosphorylation	3.39E-02
266	GO:0006413: translational initiation	3.42E-02
267	GO:0042023: DNA endoreduplication	3.67E-02
268	GO:0005992: trehalose biosynthetic process	3.95E-02
269	GO:0009944: polarity specification of adaxial/abaxial axis	3.95E-02
270	GO:0009644: response to high light intensity	4.19E-02
271	GO:0009768: photosynthesis, light harvesting in photosystem I	4.23E-02
272	GO:0008299: isoprenoid biosynthetic process	4.23E-02
273	GO:0006418: tRNA aminoacylation for protein translation	4.23E-02
274	GO:0051302: regulation of cell division	4.23E-02
275	GO:0019915: lipid storage	4.53E-02
276	GO:0061077: chaperone-mediated protein folding	4.53E-02
277	GO:0009269: response to desiccation	4.53E-02
278	GO:0016114: terpenoid biosynthetic process	4.53E-02
279	GO:0016042: lipid catabolic process	4.58E-02
280	GO:0008380: RNA splicing	4.63E-02
281	GO:0019748: secondary metabolic process	4.83E-02
282	GO:0030245: cellulose catabolic process	4.83E-02
283	GO:0042538: hyperosmotic salinity response	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
2	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
3	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
4	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
5	GO:0004823: leucine-tRNA ligase activity	0.00E+00
6	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
7	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
8	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
9	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
10	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
11	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
12	GO:0016210: naringenin-chalcone synthase activity	0.00E+00
13	GO:0005048: signal sequence binding	0.00E+00
14	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
15	GO:0050613: delta14-sterol reductase activity	0.00E+00
16	GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity	0.00E+00
17	GO:0010276: phytol kinase activity	0.00E+00
18	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
19	GO:0016987: sigma factor activity	4.09E-06
20	GO:0001053: plastid sigma factor activity	4.09E-06
21	GO:0019156: isoamylase activity	2.07E-05
22	GO:0019899: enzyme binding	4.26E-05
23	GO:0070402: NADPH binding	6.75E-05
24	GO:0043495: protein anchor	2.38E-04
25	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.38E-04
26	GO:0016773: phosphotransferase activity, alcohol group as acceptor	3.57E-04
27	GO:0016788: hydrolase activity, acting on ester bonds	4.34E-04
28	GO:0003924: GTPase activity	4.79E-04
29	GO:0004556: alpha-amylase activity	4.97E-04
30	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	6.58E-04
31	GO:0005080: protein kinase C binding	6.97E-04
32	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	6.97E-04
33	GO:0008746: NAD(P)+ transhydrogenase activity	6.97E-04
34	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	6.97E-04
35	GO:0004328: formamidase activity	6.97E-04
36	GO:0042586: peptide deformylase activity	6.97E-04
37	GO:0010347: L-galactose-1-phosphate phosphatase activity	6.97E-04
38	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	6.97E-04
39	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	6.97E-04
40	GO:0051777: ent-kaurenoate oxidase activity	6.97E-04
41	GO:0004856: xylulokinase activity	6.97E-04
42	GO:0046906: tetrapyrrole binding	6.97E-04
43	GO:0005227: calcium activated cation channel activity	6.97E-04
44	GO:0005525: GTP binding	8.51E-04
45	GO:0004033: aldo-keto reductase (NADP) activity	1.04E-03
46	GO:0042802: identical protein binding	1.05E-03
47	GO:0003727: single-stranded RNA binding	1.09E-03
48	GO:0003993: acid phosphatase activity	1.17E-03
49	GO:0016491: oxidoreductase activity	1.27E-03
50	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.50E-03
51	GO:0008934: inositol monophosphate 1-phosphatase activity	1.50E-03
52	GO:0052833: inositol monophosphate 4-phosphatase activity	1.50E-03
53	GO:0004512: inositol-3-phosphate synthase activity	1.50E-03
54	GO:0048531: beta-1,3-galactosyltransferase activity	1.50E-03
55	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.50E-03
56	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	1.50E-03
57	GO:0009977: proton motive force dependent protein transmembrane transporter activity	1.50E-03
58	GO:0004617: phosphoglycerate dehydrogenase activity	1.50E-03
59	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	1.50E-03
60	GO:0004047: aminomethyltransferase activity	1.50E-03
61	GO:0061575: cyclin-dependent protein serine/threonine kinase activator activity	1.50E-03
62	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.50E-03
63	GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity	1.50E-03
64	GO:0052832: inositol monophosphate 3-phosphatase activity	1.50E-03
65	GO:0004312: fatty acid synthase activity	1.50E-03
66	GO:0048038: quinone binding	1.92E-03
67	GO:0004751: ribose-5-phosphate isomerase activity	2.48E-03
68	GO:0016992: lipoate synthase activity	2.48E-03
69	GO:0003913: DNA photolyase activity	2.48E-03
70	GO:0002161: aminoacyl-tRNA editing activity	2.48E-03
71	GO:0004848: ureidoglycolate hydrolase activity	2.48E-03
72	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	2.48E-03
73	GO:0008864: formyltetrahydrofolate deformylase activity	2.48E-03
74	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	2.48E-03
75	GO:0015462: ATPase-coupled protein transmembrane transporter activity	2.48E-03
76	GO:0016168: chlorophyll binding	3.31E-03
77	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.60E-03
78	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	3.61E-03
79	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	3.61E-03
80	GO:0048027: mRNA 5'-UTR binding	3.61E-03
81	GO:0043023: ribosomal large subunit binding	3.61E-03
82	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	3.61E-03
83	GO:0016851: magnesium chelatase activity	3.61E-03
84	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	3.61E-03
85	GO:0001872: (1->3)-beta-D-glucan binding	3.61E-03
86	GO:0003999: adenine phosphoribosyltransferase activity	3.61E-03
87	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	3.61E-03
88	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	3.61E-03
89	GO:0003883: CTP synthase activity	3.61E-03
90	GO:0080032: methyl jasmonate esterase activity	4.87E-03
91	GO:0042277: peptide binding	4.87E-03
92	GO:0004392: heme oxygenase (decyclizing) activity	4.87E-03
93	GO:0008891: glycolate oxidase activity	4.87E-03
94	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	4.87E-03
95	GO:0019199: transmembrane receptor protein kinase activity	4.87E-03
96	GO:0004659: prenyltransferase activity	4.87E-03
97	GO:0016279: protein-lysine N-methyltransferase activity	4.87E-03
98	GO:0045430: chalcone isomerase activity	4.87E-03
99	GO:0009011: starch synthase activity	4.87E-03
100	GO:0004222: metalloendopeptidase activity	4.93E-03
101	GO:0005528: FK506 binding	5.01E-03
102	GO:0003824: catalytic activity	5.06E-03
103	GO:0019843: rRNA binding	6.22E-03
104	GO:0016846: carbon-sulfur lyase activity	6.27E-03
105	GO:0022891: substrate-specific transmembrane transporter activity	7.30E-03
106	GO:0015081: sodium ion transmembrane transporter activity	7.79E-03
107	GO:0016615: malate dehydrogenase activity	7.79E-03
108	GO:0008200: ion channel inhibitor activity	7.79E-03
109	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	7.79E-03
110	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	7.79E-03
111	GO:0004784: superoxide dismutase activity	7.79E-03
112	GO:0042578: phosphoric ester hydrolase activity	7.79E-03
113	GO:0004605: phosphatidate cytidylyltransferase activity	7.79E-03
114	GO:0080030: methyl indole-3-acetate esterase activity	7.79E-03
115	GO:0016208: AMP binding	7.79E-03
116	GO:0004462: lactoylglutathione lyase activity	7.79E-03
117	GO:0003723: RNA binding	8.27E-03
118	GO:0003730: mRNA 3'-UTR binding	9.42E-03
119	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	9.42E-03
120	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	9.42E-03
121	GO:0030060: L-malate dehydrogenase activity	9.42E-03
122	GO:0005261: cation channel activity	9.42E-03
123	GO:0008195: phosphatidate phosphatase activity	9.42E-03
124	GO:0052689: carboxylic ester hydrolase activity	9.85E-03
125	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	9.95E-03
126	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.20E-02
127	GO:0003690: double-stranded DNA binding	1.25E-02
128	GO:0008312: 7S RNA binding	1.30E-02
129	GO:0008135: translation factor activity, RNA binding	1.50E-02
130	GO:0046914: transition metal ion binding	1.50E-02
131	GO:0016791: phosphatase activity	1.52E-02
132	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.55E-02
133	GO:0005200: structural constituent of cytoskeleton	1.61E-02
134	GO:0008483: transaminase activity	1.61E-02
135	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.61E-02
136	GO:0008237: metallopeptidase activity	1.61E-02
137	GO:0003747: translation release factor activity	1.70E-02
138	GO:0005381: iron ion transmembrane transporter activity	1.92E-02
139	GO:0016844: strictosidine synthase activity	1.92E-02
140	GO:0008047: enzyme activator activity	2.14E-02
141	GO:0015020: glucuronosyltransferase activity	2.14E-02
142	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.37E-02
143	GO:0015386: potassium:proton antiporter activity	2.38E-02
144	GO:0008559: xenobiotic-transporting ATPase activity	2.38E-02
145	GO:0047372: acylglycerol lipase activity	2.38E-02
146	GO:0008378: galactosyltransferase activity	2.62E-02
147	GO:0005315: inorganic phosphate transmembrane transporter activity	2.87E-02
148	GO:0010329: auxin efflux transmembrane transporter activity	2.87E-02
149	GO:0004089: carbonate dehydratase activity	2.87E-02
150	GO:0031072: heat shock protein binding	2.87E-02
151	GO:0003725: double-stranded RNA binding	2.87E-02
152	GO:0009982: pseudouridine synthase activity	2.87E-02
153	GO:0004022: alcohol dehydrogenase (NAD) activity	2.87E-02
154	GO:0003746: translation elongation factor activity	3.01E-02
155	GO:0008266: poly(U) RNA binding	3.13E-02
156	GO:0008083: growth factor activity	3.13E-02
157	GO:0003774: motor activity	3.13E-02
158	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.29E-02
159	GO:0031409: pigment binding	3.67E-02
160	GO:0004185: serine-type carboxypeptidase activity	3.88E-02
161	GO:0004857: enzyme inhibitor activity	3.95E-02
162	GO:0043130: ubiquitin binding	3.95E-02
163	GO:0043621: protein self-association	4.19E-02
164	GO:0035091: phosphatidylinositol binding	4.19E-02
165	GO:0003743: translation initiation factor activity	4.51E-02
166	GO:0004176: ATP-dependent peptidase activity	4.53E-02
167	GO:0033612: receptor serine/threonine kinase binding	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0009344: nitrite reductase complex [NAD(P)H]	0.00E+00
2	GO:0043235: receptor complex	0.00E+00
3	GO:0010368: chloroplast isoamylase complex	0.00E+00
4	GO:0009507: chloroplast	2.17E-50
5	GO:0009570: chloroplast stroma	1.65E-21
6	GO:0009535: chloroplast thylakoid membrane	3.20E-21
7	GO:0009941: chloroplast envelope	1.52E-11
8	GO:0009543: chloroplast thylakoid lumen	3.63E-09
9	GO:0009579: thylakoid	1.35E-08
10	GO:0009654: photosystem II oxygen evolving complex	3.16E-06
11	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.81E-06
12	GO:0009534: chloroplast thylakoid	4.37E-06
13	GO:0031969: chloroplast membrane	4.87E-06
14	GO:0080085: signal recognition particle, chloroplast targeting	2.07E-05
15	GO:0010319: stromule	4.73E-05
16	GO:0033281: TAT protein transport complex	6.75E-05
17	GO:0009706: chloroplast inner membrane	2.04E-04
18	GO:0019898: extrinsic component of membrane	2.47E-04
19	GO:0009508: plastid chromosome	3.34E-04
20	GO:0030095: chloroplast photosystem II	3.94E-04
21	GO:0009295: nucleoid	4.20E-04
22	GO:0042651: thylakoid membrane	6.91E-04
23	GO:0005787: signal peptidase complex	6.97E-04
24	GO:0031361: integral component of thylakoid membrane	6.97E-04
25	GO:0009707: chloroplast outer membrane	7.64E-04
26	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.27E-03
27	GO:0031977: thylakoid lumen	1.43E-03
28	GO:0008290: F-actin capping protein complex	1.50E-03
29	GO:0042644: chloroplast nucleoid	1.52E-03
30	GO:0016021: integral component of membrane	1.62E-03
31	GO:0009523: photosystem II	1.76E-03
32	GO:0009528: plastid inner membrane	2.48E-03
33	GO:0010007: magnesium chelatase complex	2.48E-03
34	GO:0009536: plastid	2.66E-03
35	GO:0042646: plastid nucleoid	3.61E-03
36	GO:0030658: transport vesicle membrane	3.61E-03
37	GO:0015630: microtubule cytoskeleton	3.61E-03
38	GO:0009517: PSII associated light-harvesting complex II	4.87E-03
39	GO:0009527: plastid outer membrane	4.87E-03
40	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	7.79E-03
41	GO:0009522: photosystem I	1.08E-02
42	GO:0012507: ER to Golgi transport vesicle membrane	1.30E-02
43	GO:0009501: amyloplast	1.30E-02
44	GO:0016020: membrane	1.48E-02
45	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	1.50E-02
46	GO:0009539: photosystem II reaction center	1.50E-02
47	GO:0005720: nuclear heterochromatin	1.70E-02
48	GO:0045298: tubulin complex	1.70E-02
49	GO:0005763: mitochondrial small ribosomal subunit	1.70E-02
50	GO:0016459: myosin complex	2.14E-02
51	GO:0048046: apoplast	2.31E-02
52	GO:0032040: small-subunit processome	2.62E-02
53	GO:0000325: plant-type vacuole	2.75E-02
54	GO:0030076: light-harvesting complex	3.39E-02
55	GO:0030176: integral component of endoplasmic reticulum membrane	3.39E-02
56	GO:0005886: plasma membrane	3.42E-02
57	GO:0009705: plant-type vacuole membrane	3.73E-02
58	GO:0009532: plastid stroma	4.53E-02