co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G36250

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045176: apical protein localization	0.00E+00
2	GO:0046460: neutral lipid biosynthetic process	0.00E+00
3	GO:0043972: histone H3-K23 acetylation	0.00E+00
4	GO:0044154: histone H3-K14 acetylation	0.00E+00
5	GO:1901698: response to nitrogen compound	0.00E+00
6	GO:0051171: regulation of nitrogen compound metabolic process	7.39E-05
7	GO:0043971: histone H3-K18 acetylation	7.39E-05
8	GO:0080005: photosystem stoichiometry adjustment	1.77E-04
9	GO:0048255: mRNA stabilization	1.77E-04
10	GO:0006898: receptor-mediated endocytosis	1.77E-04
11	GO:0006435: threonyl-tRNA aminoacylation	1.77E-04
12	GO:0045493: xylan catabolic process	2.99E-04
13	GO:0006013: mannose metabolic process	2.99E-04
14	GO:0071705: nitrogen compound transport	2.99E-04
15	GO:0009800: cinnamic acid biosynthetic process	4.32E-04
16	GO:0010255: glucose mediated signaling pathway	4.32E-04
17	GO:0055069: zinc ion homeostasis	4.32E-04
18	GO:0010583: response to cyclopentenone	5.65E-04
19	GO:0071249: cellular response to nitrate	5.75E-04
20	GO:0006552: leucine catabolic process	5.75E-04
21	GO:0006465: signal peptide processing	7.29E-04
22	GO:0009416: response to light stimulus	8.73E-04
23	GO:0048827: phyllome development	8.91E-04
24	GO:0042549: photosystem II stabilization	8.91E-04
25	GO:0006559: L-phenylalanine catabolic process	8.91E-04
26	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.06E-03
27	GO:0034389: lipid particle organization	1.06E-03
28	GO:0022904: respiratory electron transport chain	1.24E-03
29	GO:0009704: de-etiolation	1.43E-03
30	GO:0007155: cell adhesion	1.43E-03
31	GO:0006353: DNA-templated transcription, termination	1.43E-03
32	GO:0010052: guard cell differentiation	1.63E-03
33	GO:0044030: regulation of DNA methylation	1.63E-03
34	GO:0006002: fructose 6-phosphate metabolic process	1.63E-03
35	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.83E-03
36	GO:0090333: regulation of stomatal closure	1.83E-03
37	GO:0019432: triglyceride biosynthetic process	1.83E-03
38	GO:0010380: regulation of chlorophyll biosynthetic process	2.05E-03
39	GO:0009750: response to fructose	2.51E-03
40	GO:0006415: translational termination	2.51E-03
41	GO:0015706: nitrate transport	2.75E-03
42	GO:0009740: gibberellic acid mediated signaling pathway	2.78E-03
43	GO:0010229: inflorescence development	3.00E-03
44	GO:0009767: photosynthetic electron transport chain	3.00E-03
45	GO:0010540: basipetal auxin transport	3.25E-03
46	GO:0080188: RNA-directed DNA methylation	3.51E-03
47	GO:0010167: response to nitrate	3.51E-03
48	GO:0009833: plant-type primary cell wall biogenesis	3.78E-03
49	GO:0006071: glycerol metabolic process	3.78E-03
50	GO:0010187: negative regulation of seed germination	4.06E-03
51	GO:0042744: hydrogen peroxide catabolic process	4.18E-03
52	GO:0010073: meristem maintenance	4.34E-03
53	GO:0006825: copper ion transport	4.34E-03
54	GO:0043622: cortical microtubule organization	4.34E-03
55	GO:0048511: rhythmic process	4.63E-03
56	GO:0019748: secondary metabolic process	4.93E-03
57	GO:0009693: ethylene biosynthetic process	5.23E-03
58	GO:0010468: regulation of gene expression	6.03E-03
59	GO:0048868: pollen tube development	6.51E-03
60	GO:0009646: response to absence of light	6.84E-03
61	GO:0048825: cotyledon development	7.19E-03
62	GO:0009749: response to glucose	7.19E-03
63	GO:0071281: cellular response to iron ion	8.25E-03
64	GO:0009723: response to ethylene	9.05E-03
65	GO:0009911: positive regulation of flower development	9.74E-03
66	GO:0046777: protein autophosphorylation	1.04E-02
67	GO:0010411: xyloglucan metabolic process	1.09E-02
68	GO:0016049: cell growth	1.13E-02
69	GO:0030244: cellulose biosynthetic process	1.17E-02
70	GO:0008219: cell death	1.17E-02
71	GO:0009832: plant-type cell wall biogenesis	1.22E-02
72	GO:0010311: lateral root formation	1.22E-02
73	GO:0006811: ion transport	1.26E-02
74	GO:0048527: lateral root development	1.30E-02
75	GO:0010043: response to zinc ion	1.30E-02
76	GO:0009910: negative regulation of flower development	1.30E-02
77	GO:0006508: proteolysis	1.38E-02
78	GO:0009853: photorespiration	1.39E-02
79	GO:0009744: response to sucrose	1.66E-02
80	GO:0051707: response to other organism	1.66E-02
81	GO:0009873: ethylene-activated signaling pathway	1.86E-02
82	GO:0009664: plant-type cell wall organization	1.95E-02
83	GO:0051603: proteolysis involved in cellular protein catabolic process	2.10E-02
84	GO:0006417: regulation of translation	2.21E-02
85	GO:0006096: glycolytic process	2.31E-02
86	GO:0009553: embryo sac development	2.58E-02
87	GO:0009624: response to nematode	2.64E-02
88	GO:0051726: regulation of cell cycle	2.75E-02
89	GO:0006457: protein folding	3.30E-02
90	GO:0009790: embryo development	3.46E-02
91	GO:0040008: regulation of growth	3.77E-02
92	GO:0007623: circadian rhythm	3.89E-02
93	GO:0010150: leaf senescence	3.89E-02
94	GO:0009451: RNA modification	3.96E-02
95	GO:0010228: vegetative to reproductive phase transition of meristem	4.02E-02
96	GO:0009739: response to gibberellin	4.22E-02
97	GO:0016567: protein ubiquitination	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
2	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
3	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
4	GO:0048039: ubiquinone binding	0.00E+00
5	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
6	GO:0017091: AU-rich element binding	7.39E-05
7	GO:0004008: copper-exporting ATPase activity	7.39E-05
8	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	1.77E-04
9	GO:0004829: threonine-tRNA ligase activity	1.77E-04
10	GO:0022821: potassium ion antiporter activity	1.77E-04
11	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	1.77E-04
12	GO:0016805: dipeptidase activity	2.99E-04
13	GO:0045548: phenylalanine ammonia-lyase activity	2.99E-04
14	GO:0009044: xylan 1,4-beta-xylosidase activity	5.75E-04
15	GO:0046556: alpha-L-arabinofuranosidase activity	5.75E-04
16	GO:0010385: double-stranded methylated DNA binding	5.75E-04
17	GO:0003730: mRNA 3'-UTR binding	1.06E-03
18	GO:0004144: diacylglycerol O-acyltransferase activity	1.06E-03
19	GO:0004559: alpha-mannosidase activity	1.06E-03
20	GO:0003872: 6-phosphofructokinase activity	1.24E-03
21	GO:0004185: serine-type carboxypeptidase activity	1.56E-03
22	GO:0005375: copper ion transmembrane transporter activity	1.63E-03
23	GO:0003747: translation release factor activity	1.83E-03
24	GO:0004871: signal transducer activity	1.90E-03
25	GO:0015020: glucuronosyltransferase activity	2.28E-03
26	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.00E-03
27	GO:0046872: metal ion binding	3.42E-03
28	GO:0016760: cellulose synthase (UDP-forming) activity	5.23E-03
29	GO:0004402: histone acetyltransferase activity	6.18E-03
30	GO:0001085: RNA polymerase II transcription factor binding	6.51E-03
31	GO:0019901: protein kinase binding	7.19E-03
32	GO:0004601: peroxidase activity	7.82E-03
33	GO:0004518: nuclease activity	7.89E-03
34	GO:0016759: cellulose synthase activity	8.61E-03
35	GO:0008237: metallopeptidase activity	8.98E-03
36	GO:0004806: triglyceride lipase activity	1.09E-02
37	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.26E-02
38	GO:0004222: metalloendopeptidase activity	1.26E-02
39	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.30E-02
40	GO:0042393: histone binding	1.52E-02
41	GO:0051539: 4 iron, 4 sulfur cluster binding	1.52E-02
42	GO:0051537: 2 iron, 2 sulfur cluster binding	1.76E-02
43	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.37E-02
44	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.47E-02
45	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.47E-02
46	GO:0016758: transferase activity, transferring hexosyl groups	3.04E-02
47	GO:0019843: rRNA binding	3.10E-02
48	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.39E-02
49	GO:0030246: carbohydrate binding	3.43E-02
50	GO:0015144: carbohydrate transmembrane transporter activity	3.52E-02
51	GO:0005351: sugar:proton symporter activity	3.83E-02
52	GO:0008194: UDP-glycosyltransferase activity	4.22E-02
53	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
2	GO:0010330: cellulose synthase complex	2.99E-04
3	GO:0005945: 6-phosphofructokinase complex	7.29E-04
4	GO:0010005: cortical microtubule, transverse to long axis	1.06E-03
5	GO:0031982: vesicle	1.43E-03
6	GO:0031305: integral component of mitochondrial inner membrane	1.43E-03
7	GO:0005811: lipid particle	1.63E-03
8	GO:0005740: mitochondrial envelope	2.28E-03
9	GO:0009505: plant-type cell wall	3.56E-03
10	GO:0045271: respiratory chain complex I	4.34E-03
11	GO:0009507: chloroplast	5.00E-03
12	GO:0005770: late endosome	6.51E-03
13	GO:0005576: extracellular region	8.08E-03
14	GO:0005667: transcription factor complex	1.05E-02
15	GO:0031966: mitochondrial membrane	1.95E-02
16	GO:0005747: mitochondrial respiratory chain complex I	2.37E-02
17	GO:0005773: vacuole	3.11E-02
18	GO:0009705: plant-type vacuole membrane	3.89E-02
19	GO:0005802: trans-Golgi network	4.08E-02
20	GO:0005622: intracellular	4.52E-02
21	GO:0005768: endosome	4.63E-02