co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G35630

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015717: triose phosphate transport	0.00E+00
2	GO:0018131: oxazole or thiazole biosynthetic process	0.00E+00
3	GO:0061635: regulation of protein complex stability	0.00E+00
4	GO:0019464: glycine decarboxylation via glycine cleavage system	2.27E-07
5	GO:0035436: triose phosphate transmembrane transport	5.40E-05
6	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	8.23E-05
7	GO:0015713: phosphoglycerate transport	1.14E-04
8	GO:0006546: glycine catabolic process	1.14E-04
9	GO:0010236: plastoquinone biosynthetic process	1.49E-04
10	GO:0006461: protein complex assembly	1.49E-04
11	GO:0009643: photosynthetic acclimation	1.86E-04
12	GO:0006751: glutathione catabolic process	1.86E-04
13	GO:0009228: thiamine biosynthetic process	1.86E-04
14	GO:0010189: vitamin E biosynthetic process	2.25E-04
15	GO:0009955: adaxial/abaxial pattern specification	2.25E-04
16	GO:1901259: chloroplast rRNA processing	2.25E-04
17	GO:0009772: photosynthetic electron transport in photosystem II	2.66E-04
18	GO:0032544: plastid translation	3.52E-04
19	GO:0009657: plastid organization	3.52E-04
20	GO:0006949: syncytium formation	4.91E-04
21	GO:0018119: peptidyl-cysteine S-nitrosylation	5.39E-04
22	GO:0009773: photosynthetic electron transport in photosystem I	5.39E-04
23	GO:0016024: CDP-diacylglycerol biosynthetic process	5.89E-04
24	GO:0010143: cutin biosynthetic process	6.92E-04
25	GO:0019253: reductive pentose-phosphate cycle	6.92E-04
26	GO:0009409: response to cold	8.40E-04
27	GO:0006810: transport	9.27E-04
28	GO:0061077: chaperone-mediated protein folding	9.65E-04
29	GO:0046686: response to cadmium ion	9.97E-04
30	GO:0015979: photosynthesis	1.07E-03
31	GO:0009828: plant-type cell wall loosening	1.73E-03
32	GO:0006974: cellular response to DNA damage stimulus	2.09E-03
33	GO:0009735: response to cytokinin	2.18E-03
34	GO:0009817: defense response to fungus, incompatible interaction	2.32E-03
35	GO:0010119: regulation of stomatal movement	2.56E-03
36	GO:0009853: photorespiration	2.72E-03
37	GO:0010114: response to red light	3.23E-03
38	GO:0009664: plant-type cell wall organization	3.77E-03
39	GO:0006096: glycolytic process	4.43E-03
40	GO:0006412: translation	4.53E-03
41	GO:0006633: fatty acid biosynthetic process	6.87E-03
42	GO:0009739: response to gibberellin	7.93E-03
43	GO:0009826: unidimensional cell growth	9.69E-03
44	GO:0032259: methylation	1.48E-02
45	GO:0042742: defense response to bacterium	3.80E-02

Rank	GO Term	Adjusted P value
1	GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity	0.00E+00
2	GO:0004375: glycine dehydrogenase (decarboxylating) activity	1.15E-07
3	GO:0009374: biotin binding	1.13E-05
4	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	1.13E-05
5	GO:0004618: phosphoglycerate kinase activity	3.00E-05
6	GO:0003839: gamma-glutamylcyclotransferase activity	3.00E-05
7	GO:0071917: triose-phosphate transmembrane transporter activity	5.40E-05
8	GO:0004148: dihydrolipoyl dehydrogenase activity	5.40E-05
9	GO:0015120: phosphoglycerate transmembrane transporter activity	1.14E-04
10	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.14E-04
11	GO:0003989: acetyl-CoA carboxylase activity	1.49E-04
12	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.86E-04
13	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.86E-04
14	GO:0019843: rRNA binding	3.70E-04
15	GO:0005528: FK506 binding	8.54E-04
16	GO:0003735: structural constituent of ribosome	1.35E-03
17	GO:0048038: quinone binding	1.52E-03
18	GO:0016791: phosphatase activity	1.73E-03
19	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.80E-03
20	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.25E-03
21	GO:0051537: 2 iron, 2 sulfur cluster binding	3.41E-03
22	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.59E-03
23	GO:0030599: pectinesterase activity	4.83E-03
24	GO:0016746: transferase activity, transferring acyl groups	5.13E-03
25	GO:0015297: antiporter activity	7.11E-03
26	GO:0008168: methyltransferase activity	9.69E-03
27	GO:0042803: protein homodimerization activity	1.36E-02
28	GO:0009055: electron carrier activity	1.60E-02
29	GO:0005509: calcium ion binding	3.58E-02
30	GO:0016491: oxidoreductase activity	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.64E-13
2	GO:0009941: chloroplast envelope	3.36E-13
3	GO:0009579: thylakoid	3.29E-12
4	GO:0009534: chloroplast thylakoid	1.30E-08
5	GO:0009535: chloroplast thylakoid membrane	2.71E-08
6	GO:0009570: chloroplast stroma	5.49E-08
7	GO:0005960: glycine cleavage complex	1.15E-07
8	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.95E-06
9	GO:0030095: chloroplast photosystem II	9.16E-06
10	GO:0009543: chloroplast thylakoid lumen	1.23E-05
11	GO:0009317: acetyl-CoA carboxylase complex	5.40E-05
12	GO:0010319: stromule	5.66E-05
13	GO:0031977: thylakoid lumen	1.37E-04
14	GO:0009533: chloroplast stromal thylakoid	2.66E-04
15	GO:0009706: chloroplast inner membrane	2.96E-04
16	GO:0005763: mitochondrial small ribosomal subunit	3.97E-04
17	GO:0016020: membrane	4.86E-04
18	GO:0005840: ribosome	6.12E-04
19	GO:0009654: photosystem II oxygen evolving complex	9.08E-04
20	GO:0009523: photosystem II	1.46E-03
21	GO:0019898: extrinsic component of membrane	1.46E-03
22	GO:0005618: cell wall	3.20E-03
23	GO:0009536: plastid	5.85E-03
24	GO:0009505: plant-type cell wall	5.98E-03
25	GO:0031969: chloroplast membrane	1.16E-02
26	GO:0048046: apoplast	1.74E-02
27	GO:0005739: mitochondrion	1.78E-02
28	GO:0005622: intracellular	3.46E-02