GO Enrichment Analysis of Co-expressed Genes with
AT5G35480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 2 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 3 | GO:0009661: chromoplast organization | 0.00E+00 |
| 4 | GO:0009773: photosynthetic electron transport in photosystem I | 1.69E-07 |
| 5 | GO:0090391: granum assembly | 6.40E-06 |
| 6 | GO:0006094: gluconeogenesis | 1.94E-05 |
| 7 | GO:0010207: photosystem II assembly | 2.39E-05 |
| 8 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.81E-05 |
| 9 | GO:0015979: photosynthesis | 4.92E-05 |
| 10 | GO:0006096: glycolytic process | 1.65E-04 |
| 11 | GO:0071277: cellular response to calcium ion | 1.91E-04 |
| 12 | GO:0046467: membrane lipid biosynthetic process | 1.91E-04 |
| 13 | GO:0015671: oxygen transport | 1.91E-04 |
| 14 | GO:0080051: cutin transport | 1.91E-04 |
| 15 | GO:0080093: regulation of photorespiration | 1.91E-04 |
| 16 | GO:0031998: regulation of fatty acid beta-oxidation | 1.91E-04 |
| 17 | GO:0006098: pentose-phosphate shunt | 2.33E-04 |
| 18 | GO:0005982: starch metabolic process | 2.78E-04 |
| 19 | GO:0018298: protein-chromophore linkage | 3.84E-04 |
| 20 | GO:0080029: cellular response to boron-containing substance levels | 4.29E-04 |
| 21 | GO:0015908: fatty acid transport | 4.29E-04 |
| 22 | GO:0006898: receptor-mediated endocytosis | 4.29E-04 |
| 23 | GO:0071457: cellular response to ozone | 4.29E-04 |
| 24 | GO:1904143: positive regulation of carotenoid biosynthetic process | 4.29E-04 |
| 25 | GO:0010218: response to far red light | 4.36E-04 |
| 26 | GO:0009637: response to blue light | 5.21E-04 |
| 27 | GO:0010143: cutin biosynthetic process | 5.55E-04 |
| 28 | GO:0010025: wax biosynthetic process | 6.92E-04 |
| 29 | GO:0006636: unsaturated fatty acid biosynthetic process | 6.92E-04 |
| 30 | GO:0015714: phosphoenolpyruvate transport | 6.99E-04 |
| 31 | GO:0010114: response to red light | 7.18E-04 |
| 32 | GO:0006810: transport | 8.73E-04 |
| 33 | GO:0005975: carbohydrate metabolic process | 9.39E-04 |
| 34 | GO:0009152: purine ribonucleotide biosynthetic process | 9.97E-04 |
| 35 | GO:0046653: tetrahydrofolate metabolic process | 9.97E-04 |
| 36 | GO:0071786: endoplasmic reticulum tubular network organization | 9.97E-04 |
| 37 | GO:0046713: borate transport | 9.97E-04 |
| 38 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 9.97E-04 |
| 39 | GO:0071484: cellular response to light intensity | 9.97E-04 |
| 40 | GO:0019748: secondary metabolic process | 1.00E-03 |
| 41 | GO:0015689: molybdate ion transport | 1.32E-03 |
| 42 | GO:0009765: photosynthesis, light harvesting | 1.32E-03 |
| 43 | GO:0015994: chlorophyll metabolic process | 1.32E-03 |
| 44 | GO:0015713: phosphoglycerate transport | 1.32E-03 |
| 45 | GO:2000122: negative regulation of stomatal complex development | 1.32E-03 |
| 46 | GO:0006021: inositol biosynthetic process | 1.32E-03 |
| 47 | GO:0071483: cellular response to blue light | 1.32E-03 |
| 48 | GO:0010037: response to carbon dioxide | 1.32E-03 |
| 49 | GO:0010222: stem vascular tissue pattern formation | 1.32E-03 |
| 50 | GO:0015976: carbon utilization | 1.32E-03 |
| 51 | GO:0071486: cellular response to high light intensity | 1.32E-03 |
| 52 | GO:0006465: signal peptide processing | 1.68E-03 |
| 53 | GO:0071493: cellular response to UV-B | 1.68E-03 |
| 54 | GO:0016120: carotene biosynthetic process | 1.68E-03 |
| 55 | GO:0009904: chloroplast accumulation movement | 1.68E-03 |
| 56 | GO:0006097: glyoxylate cycle | 1.68E-03 |
| 57 | GO:0019252: starch biosynthetic process | 1.71E-03 |
| 58 | GO:0055114: oxidation-reduction process | 1.87E-03 |
| 59 | GO:1902456: regulation of stomatal opening | 2.07E-03 |
| 60 | GO:0010190: cytochrome b6f complex assembly | 2.07E-03 |
| 61 | GO:0042549: photosystem II stabilization | 2.07E-03 |
| 62 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 2.07E-03 |
| 63 | GO:0032259: methylation | 2.45E-03 |
| 64 | GO:0071333: cellular response to glucose stimulus | 2.49E-03 |
| 65 | GO:0009903: chloroplast avoidance movement | 2.49E-03 |
| 66 | GO:0010189: vitamin E biosynthetic process | 2.49E-03 |
| 67 | GO:0009854: oxidative photosynthetic carbon pathway | 2.49E-03 |
| 68 | GO:0010196: nonphotochemical quenching | 2.93E-03 |
| 69 | GO:0009769: photosynthesis, light harvesting in photosystem II | 2.93E-03 |
| 70 | GO:1900057: positive regulation of leaf senescence | 2.93E-03 |
| 71 | GO:0009645: response to low light intensity stimulus | 2.93E-03 |
| 72 | GO:0009395: phospholipid catabolic process | 2.93E-03 |
| 73 | GO:0015995: chlorophyll biosynthetic process | 3.09E-03 |
| 74 | GO:0019827: stem cell population maintenance | 3.40E-03 |
| 75 | GO:0009642: response to light intensity | 3.40E-03 |
| 76 | GO:0070413: trehalose metabolism in response to stress | 3.40E-03 |
| 77 | GO:0009704: de-etiolation | 3.40E-03 |
| 78 | GO:0050821: protein stabilization | 3.40E-03 |
| 79 | GO:0052543: callose deposition in cell wall | 3.40E-03 |
| 80 | GO:0016559: peroxisome fission | 3.40E-03 |
| 81 | GO:0071482: cellular response to light stimulus | 3.88E-03 |
| 82 | GO:0019430: removal of superoxide radicals | 3.88E-03 |
| 83 | GO:0009853: photorespiration | 4.33E-03 |
| 84 | GO:0019432: triglyceride biosynthetic process | 4.40E-03 |
| 85 | GO:0090333: regulation of stomatal closure | 4.40E-03 |
| 86 | GO:0006783: heme biosynthetic process | 4.40E-03 |
| 87 | GO:0034599: cellular response to oxidative stress | 4.52E-03 |
| 88 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.93E-03 |
| 89 | GO:0006631: fatty acid metabolic process | 5.13E-03 |
| 90 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.48E-03 |
| 91 | GO:0006535: cysteine biosynthetic process from serine | 5.48E-03 |
| 92 | GO:0009641: shade avoidance | 5.48E-03 |
| 93 | GO:0009644: response to high light intensity | 6.02E-03 |
| 94 | GO:0043085: positive regulation of catalytic activity | 6.06E-03 |
| 95 | GO:0010588: cotyledon vascular tissue pattern formation | 7.28E-03 |
| 96 | GO:0030048: actin filament-based movement | 7.28E-03 |
| 97 | GO:0006108: malate metabolic process | 7.28E-03 |
| 98 | GO:0006006: glucose metabolic process | 7.28E-03 |
| 99 | GO:0080167: response to karrikin | 7.38E-03 |
| 100 | GO:0010020: chloroplast fission | 7.91E-03 |
| 101 | GO:0019253: reductive pentose-phosphate cycle | 7.91E-03 |
| 102 | GO:0007015: actin filament organization | 7.91E-03 |
| 103 | GO:0010223: secondary shoot formation | 7.91E-03 |
| 104 | GO:0009266: response to temperature stimulus | 7.91E-03 |
| 105 | GO:0009833: plant-type primary cell wall biogenesis | 9.25E-03 |
| 106 | GO:0019762: glucosinolate catabolic process | 9.25E-03 |
| 107 | GO:0005992: trehalose biosynthetic process | 9.94E-03 |
| 108 | GO:0019344: cysteine biosynthetic process | 9.94E-03 |
| 109 | GO:0009269: response to desiccation | 1.14E-02 |
| 110 | GO:0016998: cell wall macromolecule catabolic process | 1.14E-02 |
| 111 | GO:0035428: hexose transmembrane transport | 1.21E-02 |
| 112 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.21E-02 |
| 113 | GO:0071215: cellular response to abscisic acid stimulus | 1.29E-02 |
| 114 | GO:0042631: cellular response to water deprivation | 1.53E-02 |
| 115 | GO:0010118: stomatal movement | 1.53E-02 |
| 116 | GO:0071472: cellular response to salt stress | 1.62E-02 |
| 117 | GO:0006520: cellular amino acid metabolic process | 1.62E-02 |
| 118 | GO:0006662: glycerol ether metabolic process | 1.62E-02 |
| 119 | GO:0046323: glucose import | 1.62E-02 |
| 120 | GO:0006633: fatty acid biosynthetic process | 1.69E-02 |
| 121 | GO:0008654: phospholipid biosynthetic process | 1.79E-02 |
| 122 | GO:0010193: response to ozone | 1.88E-02 |
| 123 | GO:0032502: developmental process | 1.97E-02 |
| 124 | GO:0009630: gravitropism | 1.97E-02 |
| 125 | GO:1901657: glycosyl compound metabolic process | 2.06E-02 |
| 126 | GO:0009735: response to cytokinin | 2.24E-02 |
| 127 | GO:0051607: defense response to virus | 2.34E-02 |
| 128 | GO:0010027: thylakoid membrane organization | 2.44E-02 |
| 129 | GO:0009416: response to light stimulus | 2.50E-02 |
| 130 | GO:0042128: nitrate assimilation | 2.64E-02 |
| 131 | GO:0010411: xyloglucan metabolic process | 2.74E-02 |
| 132 | GO:0030244: cellulose biosynthetic process | 2.95E-02 |
| 133 | GO:0010311: lateral root formation | 3.05E-02 |
| 134 | GO:0000160: phosphorelay signal transduction system | 3.05E-02 |
| 135 | GO:0010119: regulation of stomatal movement | 3.27E-02 |
| 136 | GO:0006099: tricarboxylic acid cycle | 3.60E-02 |
| 137 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.68E-02 |
| 138 | GO:0042542: response to hydrogen peroxide | 4.06E-02 |
| 139 | GO:0000209: protein polyubiquitination | 4.30E-02 |
| 140 | GO:0042546: cell wall biogenesis | 4.30E-02 |
| 141 | GO:0006869: lipid transport | 4.66E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 0.00E+00 |
| 2 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 3 | GO:0033840: NDP-glucose-starch glucosyltransferase activity | 0.00E+00 |
| 4 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 5 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 6 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 7 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 8 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 9 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 10 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 11 | GO:0004332: fructose-bisphosphate aldolase activity | 5.82E-07 |
| 12 | GO:0004373: glycogen (starch) synthase activity | 6.40E-06 |
| 13 | GO:0004565: beta-galactosidase activity | 1.94E-05 |
| 14 | GO:0009011: starch synthase activity | 2.72E-05 |
| 15 | GO:0031409: pigment binding | 3.46E-05 |
| 16 | GO:0015121: phosphoenolpyruvate:phosphate antiporter activity | 1.91E-04 |
| 17 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 1.91E-04 |
| 18 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 1.91E-04 |
| 19 | GO:0015168: glycerol transmembrane transporter activity | 1.91E-04 |
| 20 | GO:0015245: fatty acid transporter activity | 1.91E-04 |
| 21 | GO:0005344: oxygen transporter activity | 1.91E-04 |
| 22 | GO:0035671: enone reductase activity | 1.91E-04 |
| 23 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 1.91E-04 |
| 24 | GO:0016168: chlorophyll binding | 2.91E-04 |
| 25 | GO:0033201: alpha-1,4-glucan synthase activity | 4.29E-04 |
| 26 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 4.29E-04 |
| 27 | GO:0018708: thiol S-methyltransferase activity | 4.29E-04 |
| 28 | GO:0004512: inositol-3-phosphate synthase activity | 4.29E-04 |
| 29 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 4.29E-04 |
| 30 | GO:0050017: L-3-cyanoalanine synthase activity | 4.29E-04 |
| 31 | GO:0008883: glutamyl-tRNA reductase activity | 4.29E-04 |
| 32 | GO:0047746: chlorophyllase activity | 4.29E-04 |
| 33 | GO:0042389: omega-3 fatty acid desaturase activity | 4.29E-04 |
| 34 | GO:0050734: hydroxycinnamoyltransferase activity | 6.99E-04 |
| 35 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 6.99E-04 |
| 36 | GO:0008864: formyltetrahydrofolate deformylase activity | 6.99E-04 |
| 37 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 6.99E-04 |
| 38 | GO:0042802: identical protein binding | 7.83E-04 |
| 39 | GO:0008168: methyltransferase activity | 9.92E-04 |
| 40 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 9.97E-04 |
| 41 | GO:0046715: borate transmembrane transporter activity | 9.97E-04 |
| 42 | GO:0001872: (1->3)-beta-D-glucan binding | 9.97E-04 |
| 43 | GO:0015098: molybdate ion transmembrane transporter activity | 1.32E-03 |
| 44 | GO:0015204: urea transmembrane transporter activity | 1.32E-03 |
| 45 | GO:0015120: phosphoglycerate transmembrane transporter activity | 1.32E-03 |
| 46 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.32E-03 |
| 47 | GO:0004784: superoxide dismutase activity | 2.07E-03 |
| 48 | GO:0016615: malate dehydrogenase activity | 2.07E-03 |
| 49 | GO:2001070: starch binding | 2.07E-03 |
| 50 | GO:0102391: decanoate--CoA ligase activity | 2.49E-03 |
| 51 | GO:0030060: L-malate dehydrogenase activity | 2.49E-03 |
| 52 | GO:0004124: cysteine synthase activity | 2.49E-03 |
| 53 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.93E-03 |
| 54 | GO:0005337: nucleoside transmembrane transporter activity | 3.40E-03 |
| 55 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.88E-03 |
| 56 | GO:0050661: NADP binding | 4.92E-03 |
| 57 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.93E-03 |
| 58 | GO:0008047: enzyme activator activity | 5.48E-03 |
| 59 | GO:0004185: serine-type carboxypeptidase activity | 5.57E-03 |
| 60 | GO:0016788: hydrolase activity, acting on ester bonds | 5.75E-03 |
| 61 | GO:0051287: NAD binding | 6.74E-03 |
| 62 | GO:0004022: alcohol dehydrogenase (NAD) activity | 7.28E-03 |
| 63 | GO:0004089: carbonate dehydratase activity | 7.28E-03 |
| 64 | GO:0008266: poly(U) RNA binding | 7.91E-03 |
| 65 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 7.91E-03 |
| 66 | GO:0003774: motor activity | 7.91E-03 |
| 67 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 9.17E-03 |
| 68 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.29E-02 |
| 69 | GO:0022891: substrate-specific transmembrane transporter activity | 1.29E-02 |
| 70 | GO:0047134: protein-disulfide reductase activity | 1.45E-02 |
| 71 | GO:0005355: glucose transmembrane transporter activity | 1.70E-02 |
| 72 | GO:0004791: thioredoxin-disulfide reductase activity | 1.70E-02 |
| 73 | GO:0016853: isomerase activity | 1.70E-02 |
| 74 | GO:0048038: quinone binding | 1.88E-02 |
| 75 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.88E-02 |
| 76 | GO:0000156: phosphorelay response regulator activity | 2.06E-02 |
| 77 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.06E-02 |
| 78 | GO:0016791: phosphatase activity | 2.15E-02 |
| 79 | GO:0016759: cellulose synthase activity | 2.15E-02 |
| 80 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.36E-02 |
| 81 | GO:0015250: water channel activity | 2.44E-02 |
| 82 | GO:0016491: oxidoreductase activity | 2.73E-02 |
| 83 | GO:0102483: scopolin beta-glucosidase activity | 2.74E-02 |
| 84 | GO:0030247: polysaccharide binding | 2.74E-02 |
| 85 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.74E-02 |
| 86 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 2.84E-02 |
| 87 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.84E-02 |
| 88 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.53E-02 |
| 89 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 3.60E-02 |
| 90 | GO:0003993: acid phosphatase activity | 3.60E-02 |
| 91 | GO:0030246: carbohydrate binding | 3.62E-02 |
| 92 | GO:0008422: beta-glucosidase activity | 3.71E-02 |
| 93 | GO:0052689: carboxylic ester hydrolase activity | 3.93E-02 |
| 94 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.41E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 9.38E-21 |
| 3 | GO:0009534: chloroplast thylakoid | 1.66E-13 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.43E-11 |
| 5 | GO:0009941: chloroplast envelope | 4.47E-10 |
| 6 | GO:0009579: thylakoid | 1.53E-06 |
| 7 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.26E-06 |
| 8 | GO:0048046: apoplast | 1.15E-05 |
| 9 | GO:0030076: light-harvesting complex | 2.89E-05 |
| 10 | GO:0010287: plastoglobule | 3.02E-05 |
| 11 | GO:0031969: chloroplast membrane | 3.49E-05 |
| 12 | GO:0009522: photosystem I | 1.32E-04 |
| 13 | GO:0009523: photosystem II | 1.46E-04 |
| 14 | GO:0009515: granal stacked thylakoid | 1.91E-04 |
| 15 | GO:0005787: signal peptidase complex | 1.91E-04 |
| 16 | GO:0009543: chloroplast thylakoid lumen | 3.28E-04 |
| 17 | GO:0009569: chloroplast starch grain | 4.29E-04 |
| 18 | GO:0043036: starch grain | 4.29E-04 |
| 19 | GO:0009897: external side of plasma membrane | 6.99E-04 |
| 20 | GO:0071782: endoplasmic reticulum tubular network | 9.97E-04 |
| 21 | GO:0009570: chloroplast stroma | 1.22E-03 |
| 22 | GO:0009517: PSII associated light-harvesting complex II | 1.32E-03 |
| 23 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 3.40E-03 |
| 24 | GO:0031982: vesicle | 3.40E-03 |
| 25 | GO:0009501: amyloplast | 3.40E-03 |
| 26 | GO:0008180: COP9 signalosome | 4.40E-03 |
| 27 | GO:0031977: thylakoid lumen | 5.13E-03 |
| 28 | GO:0016459: myosin complex | 5.48E-03 |
| 29 | GO:0005777: peroxisome | 7.73E-03 |
| 30 | GO:0030095: chloroplast photosystem II | 7.91E-03 |
| 31 | GO:0043234: protein complex | 9.25E-03 |
| 32 | GO:0009654: photosystem II oxygen evolving complex | 1.07E-02 |
| 33 | GO:0042651: thylakoid membrane | 1.07E-02 |
| 34 | GO:0005623: cell | 1.38E-02 |
| 35 | GO:0005773: vacuole | 1.41E-02 |
| 36 | GO:0019898: extrinsic component of membrane | 1.79E-02 |
| 37 | GO:0016021: integral component of membrane | 2.14E-02 |
| 38 | GO:0010319: stromule | 2.25E-02 |
| 39 | GO:0009505: plant-type cell wall | 2.54E-02 |
| 40 | GO:0009707: chloroplast outer membrane | 2.95E-02 |
| 41 | GO:0019005: SCF ubiquitin ligase complex | 2.95E-02 |