Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G33290

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
2GO:0072722: response to amitrole0.00E+00
3GO:0006903: vesicle targeting0.00E+00
4GO:0006216: cytidine catabolic process0.00E+00
5GO:0090400: stress-induced premature senescence0.00E+00
6GO:0048034: heme O biosynthetic process0.00E+00
7GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation0.00E+00
8GO:2000117: negative regulation of cysteine-type endopeptidase activity0.00E+00
9GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
10GO:1904250: positive regulation of age-related resistance0.00E+00
11GO:0016102: diterpenoid biosynthetic process0.00E+00
12GO:0046686: response to cadmium ion2.95E-06
13GO:0006102: isocitrate metabolic process6.61E-06
14GO:0006099: tricarboxylic acid cycle9.17E-06
15GO:0046283: anthocyanin-containing compound metabolic process8.25E-05
16GO:0006564: L-serine biosynthetic process8.25E-05
17GO:0009407: toxin catabolic process9.44E-05
18GO:0055114: oxidation-reduction process1.72E-04
19GO:0010421: hydrogen peroxide-mediated programmed cell death2.80E-04
20GO:0006680: glucosylceramide catabolic process2.80E-04
21GO:0042964: thioredoxin reduction2.80E-04
22GO:0010120: camalexin biosynthetic process3.35E-04
23GO:0046939: nucleotide phosphorylation6.14E-04
24GO:0009805: coumarin biosynthetic process6.14E-04
25GO:1902000: homogentisate catabolic process6.14E-04
26GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine6.14E-04
27GO:0080026: response to indolebutyric acid6.14E-04
28GO:0015709: thiosulfate transport6.14E-04
29GO:0031204: posttranslational protein targeting to membrane, translocation6.14E-04
30GO:0071422: succinate transmembrane transport6.14E-04
31GO:0006807: nitrogen compound metabolic process8.37E-04
32GO:0010272: response to silver ion9.96E-04
33GO:0009072: aromatic amino acid family metabolic process9.96E-04
34GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity9.96E-04
35GO:0006591: ornithine metabolic process9.96E-04
36GO:0009062: fatty acid catabolic process9.96E-04
37GO:0061158: 3'-UTR-mediated mRNA destabilization9.96E-04
38GO:0055074: calcium ion homeostasis9.96E-04
39GO:0006556: S-adenosylmethionine biosynthetic process9.96E-04
40GO:0006517: protein deglycosylation9.96E-04
41GO:0000162: tryptophan biosynthetic process1.16E-03
42GO:0010150: leaf senescence1.24E-03
43GO:0006979: response to oxidative stress1.29E-03
44GO:0015729: oxaloacetate transport1.42E-03
45GO:0006874: cellular calcium ion homeostasis1.42E-03
46GO:0080028: nitrile biosynthetic process1.42E-03
47GO:0006612: protein targeting to membrane1.42E-03
48GO:0006893: Golgi to plasma membrane transport1.42E-03
49GO:0080024: indolebutyric acid metabolic process1.42E-03
50GO:0000187: activation of MAPK activity1.42E-03
51GO:0016998: cell wall macromolecule catabolic process1.56E-03
52GO:1902584: positive regulation of response to water deprivation1.91E-03
53GO:0010188: response to microbial phytotoxin1.91E-03
54GO:0006878: cellular copper ion homeostasis1.91E-03
55GO:0045927: positive regulation of growth2.43E-03
56GO:0000304: response to singlet oxygen2.43E-03
57GO:0071423: malate transmembrane transport2.43E-03
58GO:0098719: sodium ion import across plasma membrane2.43E-03
59GO:0097428: protein maturation by iron-sulfur cluster transfer2.43E-03
60GO:0009651: response to salt stress2.50E-03
61GO:0009851: auxin biosynthetic process2.93E-03
62GO:0010264: myo-inositol hexakisphosphate biosynthetic process3.00E-03
63GO:0006555: methionine metabolic process3.00E-03
64GO:0060918: auxin transport3.00E-03
65GO:0009228: thiamine biosynthetic process3.00E-03
66GO:0035435: phosphate ion transmembrane transport3.00E-03
67GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione3.00E-03
68GO:0009972: cytidine deamination3.00E-03
69GO:0006561: proline biosynthetic process3.00E-03
70GO:0019509: L-methionine salvage from methylthioadenosine3.62E-03
71GO:0009082: branched-chain amino acid biosynthetic process3.62E-03
72GO:0034389: lipid particle organization3.62E-03
73GO:0009099: valine biosynthetic process3.62E-03
74GO:0009554: megasporogenesis3.62E-03
75GO:0080113: regulation of seed growth3.62E-03
76GO:0042742: defense response to bacterium4.23E-03
77GO:0080027: response to herbivore4.26E-03
78GO:1900056: negative regulation of leaf senescence4.26E-03
79GO:0080186: developmental vegetative growth4.26E-03
80GO:0071669: plant-type cell wall organization or biogenesis4.26E-03
81GO:1900057: positive regulation of leaf senescence4.26E-03
82GO:0008272: sulfate transport4.26E-03
83GO:0050829: defense response to Gram-negative bacterium4.26E-03
84GO:1902074: response to salt4.26E-03
85GO:0045454: cell redox homeostasis4.42E-03
86GO:0009615: response to virus4.53E-03
87GO:0009058: biosynthetic process4.61E-03
88GO:0009819: drought recovery4.95E-03
89GO:0043068: positive regulation of programmed cell death4.95E-03
90GO:0006491: N-glycan processing4.95E-03
91GO:0009627: systemic acquired resistance5.06E-03
92GO:0006888: ER to Golgi vesicle-mediated transport5.33E-03
93GO:0009699: phenylpropanoid biosynthetic process5.67E-03
94GO:0006002: fructose 6-phosphate metabolic process5.67E-03
95GO:0022900: electron transport chain5.67E-03
96GO:0060321: acceptance of pollen5.67E-03
97GO:0019430: removal of superoxide radicals5.67E-03
98GO:0007186: G-protein coupled receptor signaling pathway5.67E-03
99GO:0010497: plasmodesmata-mediated intercellular transport5.67E-03
100GO:0009097: isoleucine biosynthetic process5.67E-03
101GO:0010204: defense response signaling pathway, resistance gene-independent5.67E-03
102GO:0009751: response to salicylic acid5.94E-03
103GO:0009821: alkaloid biosynthetic process6.43E-03
104GO:0006783: heme biosynthetic process6.43E-03
105GO:0010112: regulation of systemic acquired resistance6.43E-03
106GO:0010043: response to zinc ion6.83E-03
107GO:0009098: leucine biosynthetic process7.22E-03
108GO:2000280: regulation of root development7.22E-03
109GO:0048354: mucilage biosynthetic process involved in seed coat development7.22E-03
110GO:0051453: regulation of intracellular pH7.22E-03
111GO:0006032: chitin catabolic process8.04E-03
112GO:0009688: abscisic acid biosynthetic process8.04E-03
113GO:0043069: negative regulation of programmed cell death8.04E-03
114GO:0009617: response to bacterium8.14E-03
115GO:0009682: induced systemic resistance8.90E-03
116GO:0052544: defense response by callose deposition in cell wall8.90E-03
117GO:0000272: polysaccharide catabolic process8.90E-03
118GO:0006790: sulfur compound metabolic process9.79E-03
119GO:0006890: retrograde vesicle-mediated transport, Golgi to ER9.79E-03
120GO:0071365: cellular response to auxin stimulus9.79E-03
121GO:0000209: protein polyubiquitination1.01E-02
122GO:0009718: anthocyanin-containing compound biosynthetic process1.07E-02
123GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.07E-02
124GO:0010102: lateral root morphogenesis1.07E-02
125GO:0055046: microgametogenesis1.07E-02
126GO:0009636: response to toxic substance1.09E-02
127GO:0031347: regulation of defense response1.17E-02
128GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.17E-02
129GO:0009846: pollen germination1.22E-02
130GO:0010053: root epidermal cell differentiation1.26E-02
131GO:0007030: Golgi organization1.26E-02
132GO:0010167: response to nitrate1.26E-02
133GO:0046854: phosphatidylinositol phosphorylation1.26E-02
134GO:0019762: glucosinolate catabolic process1.37E-02
135GO:0034976: response to endoplasmic reticulum stress1.37E-02
136GO:0045333: cellular respiration1.47E-02
137GO:0005992: trehalose biosynthetic process1.47E-02
138GO:0006096: glycolytic process1.55E-02
139GO:0010073: meristem maintenance1.58E-02
140GO:0016192: vesicle-mediated transport1.59E-02
141GO:0009626: plant-type hypersensitive response1.65E-02
142GO:0019915: lipid storage1.68E-02
143GO:0015992: proton transport1.68E-02
144GO:0009620: response to fungus1.70E-02
145GO:0019748: secondary metabolic process1.80E-02
146GO:0030245: cellulose catabolic process1.80E-02
147GO:0009814: defense response, incompatible interaction1.80E-02
148GO:0030433: ubiquitin-dependent ERAD pathway1.80E-02
149GO:0006730: one-carbon metabolic process1.80E-02
150GO:0009693: ethylene biosynthetic process1.91E-02
151GO:0010227: floral organ abscission1.91E-02
152GO:0009561: megagametogenesis2.03E-02
153GO:0009306: protein secretion2.03E-02
154GO:0015031: protein transport2.04E-02
155GO:0042147: retrograde transport, endosome to Golgi2.15E-02
156GO:0042631: cellular response to water deprivation2.27E-02
157GO:0010051: xylem and phloem pattern formation2.27E-02
158GO:0006662: glycerol ether metabolic process2.39E-02
159GO:0006629: lipid metabolic process2.44E-02
160GO:0048544: recognition of pollen2.52E-02
161GO:0006814: sodium ion transport2.52E-02
162GO:0010183: pollen tube guidance2.65E-02
163GO:0009753: response to jasmonic acid2.66E-02
164GO:0008152: metabolic process2.75E-02
165GO:0006891: intra-Golgi vesicle-mediated transport2.78E-02
166GO:0006635: fatty acid beta-oxidation2.78E-02
167GO:0009630: gravitropism2.91E-02
168GO:1901657: glycosyl compound metabolic process3.05E-02
169GO:0030163: protein catabolic process3.05E-02
170GO:0071281: cellular response to iron ion3.05E-02
171GO:0009567: double fertilization forming a zygote and endosperm3.19E-02
172GO:0019760: glucosinolate metabolic process3.19E-02
173GO:0010252: auxin homeostasis3.19E-02
174GO:0006464: cellular protein modification process3.19E-02
175GO:0045490: pectin catabolic process3.22E-02
176GO:0006904: vesicle docking involved in exocytosis3.33E-02
177GO:0071805: potassium ion transmembrane transport3.33E-02
178GO:0050832: defense response to fungus3.41E-02
179GO:0051607: defense response to virus3.47E-02
180GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.61E-02
181GO:0010029: regulation of seed germination3.76E-02
182GO:0010468: regulation of gene expression3.84E-02
183GO:0006974: cellular response to DNA damage stimulus3.91E-02
184GO:0016049: cell growth4.21E-02
185GO:0009817: defense response to fungus, incompatible interaction4.37E-02
186GO:0048767: root hair elongation4.52E-02
187GO:0006499: N-terminal protein myristoylation4.68E-02
188GO:0009733: response to auxin4.83E-02
189GO:0048527: lateral root development4.84E-02
190GO:0009631: cold acclimation4.84E-02
RankGO TermAdjusted P value
1GO:0016034: maleylacetoacetate isomerase activity0.00E+00
2GO:0051766: inositol trisphosphate kinase activity0.00E+00
3GO:0070577: lysine-acetylated histone binding0.00E+00
4GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
5GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
6GO:0080013: (E,E)-geranyllinalool synthase activity0.00E+00
7GO:0047844: deoxycytidine deaminase activity0.00E+00
8GO:0008495: protoheme IX farnesyltransferase activity0.00E+00
9GO:0016504: peptidase activator activity0.00E+00
10GO:0004449: isocitrate dehydrogenase (NAD+) activity1.21E-07
11GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity1.20E-04
12GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity1.20E-04
13GO:0004364: glutathione transferase activity1.77E-04
14GO:0043295: glutathione binding2.16E-04
15GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity2.80E-04
16GO:0010179: IAA-Ala conjugate hydrolase activity2.80E-04
17GO:2001227: quercitrin binding2.80E-04
18GO:0004425: indole-3-glycerol-phosphate synthase activity2.80E-04
19GO:0000824: inositol tetrakisphosphate 3-kinase activity2.80E-04
20GO:0033984: indole-3-glycerol-phosphate lyase activity2.80E-04
21GO:0070401: NADP+ binding2.80E-04
22GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity2.80E-04
23GO:0047326: inositol tetrakisphosphate 5-kinase activity2.80E-04
24GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity2.80E-04
25GO:0048037: cofactor binding2.80E-04
26GO:0004348: glucosylceramidase activity2.80E-04
27GO:2001147: camalexin binding2.80E-04
28GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity2.80E-04
29GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity2.80E-04
30GO:0004649: poly(ADP-ribose) glycohydrolase activity2.80E-04
31GO:0016229: steroid dehydrogenase activity2.80E-04
32GO:0010297: heteropolysaccharide binding6.14E-04
33GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity6.14E-04
34GO:0004617: phosphoglycerate dehydrogenase activity6.14E-04
35GO:0008805: carbon-monoxide oxygenase activity6.14E-04
36GO:1990585: hydroxyproline O-arabinosyltransferase activity6.14E-04
37GO:0004775: succinate-CoA ligase (ADP-forming) activity6.14E-04
38GO:0019172: glyoxalase III activity6.14E-04
39GO:1901677: phosphate transmembrane transporter activity6.14E-04
40GO:0015117: thiosulfate transmembrane transporter activity6.14E-04
41GO:0004776: succinate-CoA ligase (GDP-forming) activity6.14E-04
42GO:0052739: phosphatidylserine 1-acylhydrolase activity6.14E-04
43GO:0004478: methionine adenosyltransferase activity9.96E-04
44GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity9.96E-04
45GO:0005310: dicarboxylic acid transmembrane transporter activity9.96E-04
46GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity9.96E-04
47GO:0003955: NAD(P)H dehydrogenase (quinone) activity9.96E-04
48GO:0015141: succinate transmembrane transporter activity9.96E-04
49GO:0004970: ionotropic glutamate receptor activity1.05E-03
50GO:0005217: intracellular ligand-gated ion channel activity1.05E-03
51GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity1.42E-03
52GO:0017077: oxidative phosphorylation uncoupler activity1.42E-03
53GO:0052655: L-valine transaminase activity1.42E-03
54GO:0019201: nucleotide kinase activity1.42E-03
55GO:0015131: oxaloacetate transmembrane transporter activity1.42E-03
56GO:0004416: hydroxyacylglutathione hydrolase activity1.42E-03
57GO:0010178: IAA-amino acid conjugate hydrolase activity1.42E-03
58GO:0016656: monodehydroascorbate reductase (NADH) activity1.42E-03
59GO:0052656: L-isoleucine transaminase activity1.42E-03
60GO:0004165: dodecenoyl-CoA delta-isomerase activity1.42E-03
61GO:0052654: L-leucine transaminase activity1.42E-03
62GO:0004834: tryptophan synthase activity1.91E-03
63GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.91E-03
64GO:0005086: ARF guanyl-nucleotide exchange factor activity1.91E-03
65GO:0070628: proteasome binding1.91E-03
66GO:0004084: branched-chain-amino-acid transaminase activity1.91E-03
67GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.91E-03
68GO:0004031: aldehyde oxidase activity1.91E-03
69GO:0050302: indole-3-acetaldehyde oxidase activity1.91E-03
70GO:0004930: G-protein coupled receptor activity1.91E-03
71GO:0010279: indole-3-acetic acid amido synthetase activity1.91E-03
72GO:0004659: prenyltransferase activity1.91E-03
73GO:0004601: peroxidase activity2.42E-03
74GO:0008374: O-acyltransferase activity2.43E-03
75GO:0004040: amidase activity2.43E-03
76GO:0004791: thioredoxin-disulfide reductase activity2.73E-03
77GO:0015035: protein disulfide oxidoreductase activity3.36E-03
78GO:0004126: cytidine deaminase activity3.62E-03
79GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.62E-03
80GO:0004017: adenylate kinase activity3.62E-03
81GO:0004602: glutathione peroxidase activity3.62E-03
82GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.03E-03
83GO:0008237: metallopeptidase activity4.03E-03
84GO:0008121: ubiquinol-cytochrome-c reductase activity4.26E-03
85GO:0003872: 6-phosphofructokinase activity4.26E-03
86GO:0015140: malate transmembrane transporter activity4.26E-03
87GO:0008320: protein transmembrane transporter activity4.26E-03
88GO:0004033: aldo-keto reductase (NADP) activity4.95E-03
89GO:0004311: farnesyltranstransferase activity4.95E-03
90GO:0004708: MAP kinase kinase activity4.95E-03
91GO:0004714: transmembrane receptor protein tyrosine kinase activity4.95E-03
92GO:0008970: phosphatidylcholine 1-acylhydrolase activity5.67E-03
93GO:0004743: pyruvate kinase activity7.22E-03
94GO:0030955: potassium ion binding7.22E-03
95GO:0016844: strictosidine synthase activity7.22E-03
96GO:0005507: copper ion binding7.36E-03
97GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors7.49E-03
98GO:0004568: chitinase activity8.04E-03
99GO:0015386: potassium:proton antiporter activity8.90E-03
100GO:0008794: arsenate reductase (glutaredoxin) activity8.90E-03
101GO:0015116: sulfate transmembrane transporter activity9.79E-03
102GO:0000287: magnesium ion binding1.11E-02
103GO:0051287: NAD binding1.17E-02
104GO:0031624: ubiquitin conjugating enzyme binding1.17E-02
105GO:0008061: chitin binding1.26E-02
106GO:0004190: aspartic-type endopeptidase activity1.26E-02
107GO:0046872: metal ion binding1.30E-02
108GO:0050660: flavin adenine dinucleotide binding1.36E-02
109GO:0031625: ubiquitin protein ligase binding1.45E-02
110GO:0061630: ubiquitin protein ligase activity1.59E-02
111GO:0010333: terpene synthase activity1.68E-02
112GO:0008810: cellulase activity1.91E-02
113GO:0003756: protein disulfide isomerase activity2.03E-02
114GO:0003727: single-stranded RNA binding2.03E-02
115GO:0047134: protein-disulfide reductase activity2.15E-02
116GO:0008080: N-acetyltransferase activity2.39E-02
117GO:0001085: RNA polymerase II transcription factor binding2.39E-02
118GO:0005199: structural constituent of cell wall2.39E-02
119GO:0010181: FMN binding2.52E-02
120GO:0030170: pyridoxal phosphate binding2.59E-02
121GO:0009055: electron carrier activity2.66E-02
122GO:0004518: nuclease activity2.91E-02
123GO:0015385: sodium:proton antiporter activity3.05E-02
124GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.05E-02
125GO:0016722: oxidoreductase activity, oxidizing metal ions3.33E-02
126GO:0016597: amino acid binding3.47E-02
127GO:0051213: dioxygenase activity3.62E-02
128GO:0102483: scopolin beta-glucosidase activity4.06E-02
129GO:0004806: triglyceride lipase activity4.06E-02
130GO:0016798: hydrolase activity, acting on glycosyl bonds4.06E-02
131GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.37E-02
132GO:0030145: manganese ion binding4.84E-02
133GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding4.84E-02
134GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.84E-02
RankGO TermAdjusted P value
1GO:0005784: Sec61 translocon complex0.00E+00
2GO:0031205: endoplasmic reticulum Sec complex0.00E+00
3GO:0005788: endoplasmic reticulum lumen5.28E-05
4GO:0005829: cytosol1.06E-04
5GO:0005783: endoplasmic reticulum1.60E-04
6GO:0005886: plasma membrane1.61E-04
7GO:0045252: oxoglutarate dehydrogenase complex2.80E-04
8GO:0009530: primary cell wall9.96E-04
9GO:0005945: 6-phosphofructokinase complex2.43E-03
10GO:0030127: COPII vesicle coat3.00E-03
11GO:0030173: integral component of Golgi membrane3.62E-03
12GO:0032580: Golgi cisterna membrane3.80E-03
13GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane4.26E-03
14GO:0005737: cytoplasm4.65E-03
15GO:0031982: vesicle4.95E-03
16GO:0005811: lipid particle5.67E-03
17GO:0031090: organelle membrane6.43E-03
18GO:0031901: early endosome membrane6.43E-03
19GO:0005773: vacuole7.99E-03
20GO:0005794: Golgi apparatus9.59E-03
21GO:0005750: mitochondrial respiratory chain complex III1.17E-02
22GO:0005839: proteasome core complex1.68E-02
23GO:0005618: cell wall2.44E-02
24GO:0016592: mediator complex2.91E-02
25GO:0000145: exocyst2.91E-02
26GO:0071944: cell periphery3.05E-02
27GO:0009506: plasmodesma3.51E-02
28GO:0005667: transcription factor complex3.91E-02
29GO:0000151: ubiquitin ligase complex4.37E-02
30GO:0005774: vacuolar membrane4.50E-02
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Gene type



Gene DE type