GO Enrichment Analysis of Co-expressed Genes with
AT5G28630
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0016118: carotenoid catabolic process | 0.00E+00 |
| 3 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 4 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 5 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 6 | GO:0006480: N-terminal protein amino acid methylation | 0.00E+00 |
| 7 | GO:0015843: methylammonium transport | 0.00E+00 |
| 8 | GO:1902171: regulation of tocopherol cyclase activity | 0.00E+00 |
| 9 | GO:0009657: plastid organization | 2.29E-06 |
| 10 | GO:0009854: oxidative photosynthetic carbon pathway | 6.56E-05 |
| 11 | GO:0019252: starch biosynthetic process | 9.77E-05 |
| 12 | GO:0043953: protein transport by the Tat complex | 1.56E-04 |
| 13 | GO:0000476: maturation of 4.5S rRNA | 1.56E-04 |
| 14 | GO:0000967: rRNA 5'-end processing | 1.56E-04 |
| 15 | GO:0046467: membrane lipid biosynthetic process | 1.56E-04 |
| 16 | GO:0006637: acyl-CoA metabolic process | 1.56E-04 |
| 17 | GO:0065002: intracellular protein transmembrane transport | 1.56E-04 |
| 18 | GO:0010028: xanthophyll cycle | 1.56E-04 |
| 19 | GO:0005982: starch metabolic process | 2.08E-04 |
| 20 | GO:0051645: Golgi localization | 3.55E-04 |
| 21 | GO:0071457: cellular response to ozone | 3.55E-04 |
| 22 | GO:0016124: xanthophyll catabolic process | 3.55E-04 |
| 23 | GO:0060151: peroxisome localization | 3.55E-04 |
| 24 | GO:0000256: allantoin catabolic process | 3.55E-04 |
| 25 | GO:0016121: carotene catabolic process | 3.55E-04 |
| 26 | GO:0034470: ncRNA processing | 3.55E-04 |
| 27 | GO:0030048: actin filament-based movement | 3.74E-04 |
| 28 | GO:0010020: chloroplast fission | 4.23E-04 |
| 29 | GO:0010114: response to red light | 5.05E-04 |
| 30 | GO:0009405: pathogenesis | 5.82E-04 |
| 31 | GO:0051646: mitochondrion localization | 5.82E-04 |
| 32 | GO:0010136: ureide catabolic process | 5.82E-04 |
| 33 | GO:0090436: leaf pavement cell development | 5.82E-04 |
| 34 | GO:0005977: glycogen metabolic process | 5.82E-04 |
| 35 | GO:0009768: photosynthesis, light harvesting in photosystem I | 6.43E-04 |
| 36 | GO:0019748: secondary metabolic process | 7.69E-04 |
| 37 | GO:0006145: purine nucleobase catabolic process | 8.33E-04 |
| 38 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 8.33E-04 |
| 39 | GO:0010731: protein glutathionylation | 8.33E-04 |
| 40 | GO:0015696: ammonium transport | 8.33E-04 |
| 41 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 8.33E-04 |
| 42 | GO:0071484: cellular response to light intensity | 8.33E-04 |
| 43 | GO:0009152: purine ribonucleotide biosynthetic process | 8.33E-04 |
| 44 | GO:0046653: tetrahydrofolate metabolic process | 8.33E-04 |
| 45 | GO:0072488: ammonium transmembrane transport | 1.10E-03 |
| 46 | GO:2000122: negative regulation of stomatal complex development | 1.10E-03 |
| 47 | GO:0006021: inositol biosynthetic process | 1.10E-03 |
| 48 | GO:0010021: amylopectin biosynthetic process | 1.10E-03 |
| 49 | GO:0010037: response to carbon dioxide | 1.10E-03 |
| 50 | GO:0015976: carbon utilization | 1.10E-03 |
| 51 | GO:0071486: cellular response to high light intensity | 1.10E-03 |
| 52 | GO:0009765: photosynthesis, light harvesting | 1.10E-03 |
| 53 | GO:0009791: post-embryonic development | 1.30E-03 |
| 54 | GO:0071493: cellular response to UV-B | 1.40E-03 |
| 55 | GO:0006564: L-serine biosynthetic process | 1.40E-03 |
| 56 | GO:0000278: mitotic cell cycle | 1.40E-03 |
| 57 | GO:0009228: thiamine biosynthetic process | 1.72E-03 |
| 58 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.72E-03 |
| 59 | GO:0046855: inositol phosphate dephosphorylation | 1.72E-03 |
| 60 | GO:0050665: hydrogen peroxide biosynthetic process | 1.72E-03 |
| 61 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.72E-03 |
| 62 | GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity | 2.06E-03 |
| 63 | GO:0071333: cellular response to glucose stimulus | 2.06E-03 |
| 64 | GO:1900056: negative regulation of leaf senescence | 2.42E-03 |
| 65 | GO:0009769: photosynthesis, light harvesting in photosystem II | 2.42E-03 |
| 66 | GO:0009645: response to low light intensity stimulus | 2.42E-03 |
| 67 | GO:0018298: protein-chromophore linkage | 2.59E-03 |
| 68 | GO:0070413: trehalose metabolism in response to stress | 2.80E-03 |
| 69 | GO:0050821: protein stabilization | 2.80E-03 |
| 70 | GO:0016559: peroxisome fission | 2.80E-03 |
| 71 | GO:0010218: response to far red light | 2.85E-03 |
| 72 | GO:0019430: removal of superoxide radicals | 3.21E-03 |
| 73 | GO:0010204: defense response signaling pathway, resistance gene-independent | 3.21E-03 |
| 74 | GO:0071482: cellular response to light stimulus | 3.21E-03 |
| 75 | GO:0009637: response to blue light | 3.27E-03 |
| 76 | GO:0009853: photorespiration | 3.27E-03 |
| 77 | GO:0034599: cellular response to oxidative stress | 3.42E-03 |
| 78 | GO:0006098: pentose-phosphate shunt | 3.63E-03 |
| 79 | GO:0009821: alkaloid biosynthetic process | 3.63E-03 |
| 80 | GO:0098656: anion transmembrane transport | 3.63E-03 |
| 81 | GO:0009658: chloroplast organization | 3.92E-03 |
| 82 | GO:0010380: regulation of chlorophyll biosynthetic process | 4.06E-03 |
| 83 | GO:0007346: regulation of mitotic cell cycle | 4.06E-03 |
| 84 | GO:0009773: photosynthetic electron transport in photosystem I | 4.99E-03 |
| 85 | GO:0072593: reactive oxygen species metabolic process | 4.99E-03 |
| 86 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.48E-03 |
| 87 | GO:0006790: sulfur compound metabolic process | 5.48E-03 |
| 88 | GO:0006094: gluconeogenesis | 5.98E-03 |
| 89 | GO:0009767: photosynthetic electron transport chain | 5.98E-03 |
| 90 | GO:0006810: transport | 6.15E-03 |
| 91 | GO:0048467: gynoecium development | 6.50E-03 |
| 92 | GO:0005975: carbohydrate metabolic process | 6.52E-03 |
| 93 | GO:0019853: L-ascorbic acid biosynthetic process | 7.04E-03 |
| 94 | GO:0046854: phosphatidylinositol phosphorylation | 7.04E-03 |
| 95 | GO:0006636: unsaturated fatty acid biosynthetic process | 7.59E-03 |
| 96 | GO:0042023: DNA endoreduplication | 7.59E-03 |
| 97 | GO:0009833: plant-type primary cell wall biogenesis | 7.59E-03 |
| 98 | GO:0009624: response to nematode | 8.06E-03 |
| 99 | GO:0005992: trehalose biosynthetic process | 8.16E-03 |
| 100 | GO:0009269: response to desiccation | 9.34E-03 |
| 101 | GO:0016114: terpenoid biosynthetic process | 9.34E-03 |
| 102 | GO:0003333: amino acid transmembrane transport | 9.34E-03 |
| 103 | GO:0030433: ubiquitin-dependent ERAD pathway | 9.96E-03 |
| 104 | GO:0071215: cellular response to abscisic acid stimulus | 1.06E-02 |
| 105 | GO:0009058: biosynthetic process | 1.07E-02 |
| 106 | GO:0009306: protein secretion | 1.12E-02 |
| 107 | GO:0042631: cellular response to water deprivation | 1.25E-02 |
| 108 | GO:0071472: cellular response to salt stress | 1.32E-02 |
| 109 | GO:0010154: fruit development | 1.32E-02 |
| 110 | GO:0006520: cellular amino acid metabolic process | 1.32E-02 |
| 111 | GO:0007059: chromosome segregation | 1.39E-02 |
| 112 | GO:0032502: developmental process | 1.61E-02 |
| 113 | GO:0009630: gravitropism | 1.61E-02 |
| 114 | GO:0007264: small GTPase mediated signal transduction | 1.61E-02 |
| 115 | GO:0010090: trichome morphogenesis | 1.68E-02 |
| 116 | GO:1901657: glycosyl compound metabolic process | 1.68E-02 |
| 117 | GO:0009567: double fertilization forming a zygote and endosperm | 1.76E-02 |
| 118 | GO:0051301: cell division | 1.95E-02 |
| 119 | GO:0010027: thylakoid membrane organization | 1.99E-02 |
| 120 | GO:0015995: chlorophyll biosynthetic process | 2.24E-02 |
| 121 | GO:0016311: dephosphorylation | 2.32E-02 |
| 122 | GO:0016049: cell growth | 2.32E-02 |
| 123 | GO:0030244: cellulose biosynthetic process | 2.41E-02 |
| 124 | GO:0006811: ion transport | 2.58E-02 |
| 125 | GO:0010119: regulation of stomatal movement | 2.67E-02 |
| 126 | GO:0009910: negative regulation of flower development | 2.67E-02 |
| 127 | GO:0080167: response to karrikin | 2.69E-02 |
| 128 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.78E-02 |
| 129 | GO:0015979: photosynthesis | 3.07E-02 |
| 130 | GO:0055114: oxidation-reduction process | 3.40E-02 |
| 131 | GO:0000209: protein polyubiquitination | 3.51E-02 |
| 132 | GO:0009644: response to high light intensity | 3.61E-02 |
| 133 | GO:0009636: response to toxic substance | 3.71E-02 |
| 134 | GO:0006364: rRNA processing | 4.22E-02 |
| 135 | GO:0008152: metabolic process | 4.36E-02 |
| 136 | GO:0006417: regulation of translation | 4.54E-02 |
| 137 | GO:0006096: glycolytic process | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 2 | GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity | 0.00E+00 |
| 3 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 4 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 5 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 6 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 7 | GO:0009011: starch synthase activity | 7.80E-08 |
| 8 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.56E-04 |
| 9 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 3.55E-04 |
| 10 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.55E-04 |
| 11 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.55E-04 |
| 12 | GO:0061575: cyclin-dependent protein serine/threonine kinase activator activity | 3.55E-04 |
| 13 | GO:0019156: isoamylase activity | 3.55E-04 |
| 14 | GO:0004103: choline kinase activity | 3.55E-04 |
| 15 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 3.55E-04 |
| 16 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.55E-04 |
| 17 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 3.55E-04 |
| 18 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.55E-04 |
| 19 | GO:0033201: alpha-1,4-glucan synthase activity | 3.55E-04 |
| 20 | GO:0003774: motor activity | 4.23E-04 |
| 21 | GO:0031409: pigment binding | 5.28E-04 |
| 22 | GO:0004373: glycogen (starch) synthase activity | 5.82E-04 |
| 23 | GO:0004848: ureidoglycolate hydrolase activity | 5.82E-04 |
| 24 | GO:0090729: toxin activity | 5.82E-04 |
| 25 | GO:0004751: ribose-5-phosphate isomerase activity | 5.82E-04 |
| 26 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 5.82E-04 |
| 27 | GO:0008864: formyltetrahydrofolate deformylase activity | 5.82E-04 |
| 28 | GO:0003883: CTP synthase activity | 8.33E-04 |
| 29 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 8.33E-04 |
| 30 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 8.33E-04 |
| 31 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 8.33E-04 |
| 32 | GO:0008891: glycolate oxidase activity | 1.10E-03 |
| 33 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.10E-03 |
| 34 | GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity | 1.40E-03 |
| 35 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.72E-03 |
| 36 | GO:0004784: superoxide dismutase activity | 1.72E-03 |
| 37 | GO:0042578: phosphoric ester hydrolase activity | 1.72E-03 |
| 38 | GO:0004556: alpha-amylase activity | 1.72E-03 |
| 39 | GO:0008519: ammonium transmembrane transporter activity | 1.72E-03 |
| 40 | GO:2001070: starch binding | 1.72E-03 |
| 41 | GO:0004332: fructose-bisphosphate aldolase activity | 1.72E-03 |
| 42 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.06E-03 |
| 43 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.06E-03 |
| 44 | GO:0016168: chlorophyll binding | 2.11E-03 |
| 45 | GO:0042802: identical protein binding | 3.06E-03 |
| 46 | GO:0008135: translation factor activity, RNA binding | 3.21E-03 |
| 47 | GO:0003993: acid phosphatase activity | 3.42E-03 |
| 48 | GO:0015174: basic amino acid transmembrane transporter activity | 4.06E-03 |
| 49 | GO:0047617: acyl-CoA hydrolase activity | 4.06E-03 |
| 50 | GO:0016844: strictosidine synthase activity | 4.06E-03 |
| 51 | GO:0004185: serine-type carboxypeptidase activity | 4.21E-03 |
| 52 | GO:0015020: glucuronosyltransferase activity | 4.52E-03 |
| 53 | GO:0051287: NAD binding | 5.09E-03 |
| 54 | GO:0004565: beta-galactosidase activity | 5.98E-03 |
| 55 | GO:0003725: double-stranded RNA binding | 5.98E-03 |
| 56 | GO:0005315: inorganic phosphate transmembrane transporter activity | 5.98E-03 |
| 57 | GO:0004089: carbonate dehydratase activity | 5.98E-03 |
| 58 | GO:0008266: poly(U) RNA binding | 6.50E-03 |
| 59 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.50E-03 |
| 60 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 6.91E-03 |
| 61 | GO:0005528: FK506 binding | 8.16E-03 |
| 62 | GO:0043130: ubiquitin binding | 8.16E-03 |
| 63 | GO:0005216: ion channel activity | 8.74E-03 |
| 64 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.06E-02 |
| 65 | GO:0003727: single-stranded RNA binding | 1.12E-02 |
| 66 | GO:0008514: organic anion transmembrane transporter activity | 1.12E-02 |
| 67 | GO:0010181: FMN binding | 1.39E-02 |
| 68 | GO:0019901: protein kinase binding | 1.46E-02 |
| 69 | GO:0048038: quinone binding | 1.54E-02 |
| 70 | GO:0016791: phosphatase activity | 1.76E-02 |
| 71 | GO:0016759: cellulose synthase activity | 1.76E-02 |
| 72 | GO:0016491: oxidoreductase activity | 1.80E-02 |
| 73 | GO:0008237: metallopeptidase activity | 1.84E-02 |
| 74 | GO:0016597: amino acid binding | 1.92E-02 |
| 75 | GO:0004672: protein kinase activity | 2.11E-02 |
| 76 | GO:0016788: hydrolase activity, acting on ester bonds | 2.21E-02 |
| 77 | GO:0102483: scopolin beta-glucosidase activity | 2.24E-02 |
| 78 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.58E-02 |
| 79 | GO:0016757: transferase activity, transferring glycosyl groups | 2.61E-02 |
| 80 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.67E-02 |
| 81 | GO:0003746: translation elongation factor activity | 2.85E-02 |
| 82 | GO:0008422: beta-glucosidase activity | 3.04E-02 |
| 83 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.04E-02 |
| 84 | GO:0042393: histone binding | 3.13E-02 |
| 85 | GO:0005525: GTP binding | 3.27E-02 |
| 86 | GO:0004364: glutathione transferase activity | 3.32E-02 |
| 87 | GO:0004871: signal transducer activity | 3.37E-02 |
| 88 | GO:0043621: protein self-association | 3.61E-02 |
| 89 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.81E-02 |
| 90 | GO:0003924: GTPase activity | 3.96E-02 |
| 91 | GO:0015171: amino acid transmembrane transporter activity | 4.54E-02 |
| 92 | GO:0031625: ubiquitin protein ligase binding | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043235: receptor complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 3.63E-15 |
| 3 | GO:0033281: TAT protein transport complex | 4.44E-06 |
| 4 | GO:0009570: chloroplast stroma | 4.33E-05 |
| 5 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.56E-04 |
| 6 | GO:0031361: integral component of thylakoid membrane | 1.56E-04 |
| 7 | GO:0010287: plastoglobule | 1.88E-04 |
| 8 | GO:0009941: chloroplast envelope | 2.01E-04 |
| 9 | GO:0016459: myosin complex | 2.46E-04 |
| 10 | GO:0005773: vacuole | 2.94E-04 |
| 11 | GO:0009535: chloroplast thylakoid membrane | 3.33E-04 |
| 12 | GO:0043036: starch grain | 3.55E-04 |
| 13 | GO:0030076: light-harvesting complex | 4.74E-04 |
| 14 | GO:0030658: transport vesicle membrane | 8.33E-04 |
| 15 | GO:0031969: chloroplast membrane | 9.50E-04 |
| 16 | GO:0009517: PSII associated light-harvesting complex II | 1.10E-03 |
| 17 | GO:0009526: plastid envelope | 1.10E-03 |
| 18 | GO:0009522: photosystem I | 1.21E-03 |
| 19 | GO:0009523: photosystem II | 1.30E-03 |
| 20 | GO:0009543: chloroplast thylakoid lumen | 1.50E-03 |
| 21 | GO:0009501: amyloplast | 2.80E-03 |
| 22 | GO:0000307: cyclin-dependent protein kinase holoenzyme complex | 3.21E-03 |
| 23 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.63E-03 |
| 24 | GO:0031977: thylakoid lumen | 3.88E-03 |
| 25 | GO:0005765: lysosomal membrane | 4.99E-03 |
| 26 | GO:0005777: peroxisome | 5.03E-03 |
| 27 | GO:0009534: chloroplast thylakoid | 5.43E-03 |
| 28 | GO:0030095: chloroplast photosystem II | 6.50E-03 |
| 29 | GO:0009654: photosystem II oxygen evolving complex | 8.74E-03 |
| 30 | GO:0042651: thylakoid membrane | 8.74E-03 |
| 31 | GO:0019898: extrinsic component of membrane | 1.46E-02 |
| 32 | GO:0009579: thylakoid | 2.20E-02 |
| 33 | GO:0009707: chloroplast outer membrane | 2.41E-02 |
| 34 | GO:0019005: SCF ubiquitin ligase complex | 2.41E-02 |
| 35 | GO:0048046: apoplast | 2.91E-02 |
| 36 | GO:0005819: spindle | 3.04E-02 |
| 37 | GO:0031902: late endosome membrane | 3.22E-02 |