Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G27830

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0018063: cytochrome c-heme linkage0.00E+00
2GO:1902009: positive regulation of toxin transport0.00E+00
3GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
4GO:0051553: flavone biosynthetic process0.00E+00
5GO:0010398: xylogalacturonan metabolic process0.00E+00
6GO:2000068: regulation of defense response to insect0.00E+00
7GO:0072722: response to amitrole0.00E+00
8GO:0071985: multivesicular body sorting pathway0.00E+00
9GO:0006654: phosphatidic acid biosynthetic process0.00E+00
10GO:1902289: negative regulation of defense response to oomycetes0.00E+00
11GO:0006216: cytidine catabolic process0.00E+00
12GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
13GO:0052386: cell wall thickening0.00E+00
14GO:0019427: acetyl-CoA biosynthetic process from acetate0.00E+00
15GO:0043619: regulation of transcription from RNA polymerase II promoter in response to oxidative stress0.00E+00
16GO:0080149: sucrose induced translational repression0.00E+00
17GO:0016192: vesicle-mediated transport3.40E-05
18GO:0051607: defense response to virus5.74E-05
19GO:0010102: lateral root morphogenesis5.95E-05
20GO:0006631: fatty acid metabolic process2.16E-04
21GO:1900057: positive regulation of leaf senescence2.54E-04
22GO:0015031: protein transport2.98E-04
23GO:0009636: response to toxic substance3.00E-04
24GO:0006083: acetate metabolic process3.11E-04
25GO:1990641: response to iron ion starvation3.11E-04
26GO:0051090: regulation of sequence-specific DNA binding transcription factor activity3.11E-04
27GO:0010230: alternative respiration3.11E-04
28GO:0006680: glucosylceramide catabolic process3.11E-04
29GO:0006886: intracellular protein transport3.16E-04
30GO:0006102: isocitrate metabolic process3.21E-04
31GO:0016559: peroxisome fission3.21E-04
32GO:0006605: protein targeting3.21E-04
33GO:0009620: response to fungus6.05E-04
34GO:0051252: regulation of RNA metabolic process6.81E-04
35GO:0015709: thiosulfate transport6.81E-04
36GO:0071422: succinate transmembrane transport6.81E-04
37GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.81E-04
38GO:0006568: tryptophan metabolic process6.81E-04
39GO:0006101: citrate metabolic process6.81E-04
40GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine6.81E-04
41GO:0044375: regulation of peroxisome size1.10E-03
42GO:0071398: cellular response to fatty acid1.10E-03
43GO:0072661: protein targeting to plasma membrane1.10E-03
44GO:0032504: multicellular organism reproduction1.10E-03
45GO:0010476: gibberellin mediated signaling pathway1.10E-03
46GO:0010325: raffinose family oligosaccharide biosynthetic process1.10E-03
47GO:0009410: response to xenobiotic stimulus1.10E-03
48GO:0010272: response to silver ion1.10E-03
49GO:0061158: 3'-UTR-mediated mRNA destabilization1.10E-03
50GO:0002230: positive regulation of defense response to virus by host1.10E-03
51GO:0090351: seedling development1.22E-03
52GO:0006099: tricarboxylic acid cycle1.33E-03
53GO:1902290: positive regulation of defense response to oomycetes1.58E-03
54GO:0080024: indolebutyric acid metabolic process1.58E-03
55GO:0055070: copper ion homeostasis1.58E-03
56GO:0001676: long-chain fatty acid metabolic process1.58E-03
57GO:0000187: activation of MAPK activity1.58E-03
58GO:0070301: cellular response to hydrogen peroxide1.58E-03
59GO:0015729: oxaloacetate transport1.58E-03
60GO:0002239: response to oomycetes1.58E-03
61GO:0009963: positive regulation of flavonoid biosynthetic process1.58E-03
62GO:0016998: cell wall macromolecule catabolic process1.82E-03
63GO:0009814: defense response, incompatible interaction1.99E-03
64GO:0009617: response to bacterium2.08E-03
65GO:0015867: ATP transport2.12E-03
66GO:0010188: response to microbial phytotoxin2.12E-03
67GO:0009939: positive regulation of gibberellic acid mediated signaling pathway2.12E-03
68GO:1902584: positive regulation of response to water deprivation2.12E-03
69GO:0006621: protein retention in ER lumen2.12E-03
70GO:1901002: positive regulation of response to salt stress2.12E-03
71GO:0006564: L-serine biosynthetic process2.71E-03
72GO:0097428: protein maturation by iron-sulfur cluster transfer2.71E-03
73GO:0006097: glyoxylate cycle2.71E-03
74GO:0045927: positive regulation of growth2.71E-03
75GO:0071423: malate transmembrane transport2.71E-03
76GO:0046283: anthocyanin-containing compound metabolic process2.71E-03
77GO:0010051: xylem and phloem pattern formation2.76E-03
78GO:0006662: glycerol ether metabolic process2.98E-03
79GO:0045489: pectin biosynthetic process2.98E-03
80GO:0035435: phosphate ion transmembrane transport3.35E-03
81GO:0009972: cytidine deamination3.35E-03
82GO:0009759: indole glucosinolate biosynthetic process3.35E-03
83GO:0015866: ADP transport3.35E-03
84GO:0010256: endomembrane system organization3.35E-03
85GO:0006555: methionine metabolic process3.35E-03
86GO:0009920: cell plate formation involved in plant-type cell wall biogenesis3.35E-03
87GO:0060918: auxin transport3.35E-03
88GO:1900425: negative regulation of defense response to bacterium3.35E-03
89GO:0006623: protein targeting to vacuole3.43E-03
90GO:0010193: response to ozone3.68E-03
91GO:0009099: valine biosynthetic process4.03E-03
92GO:0080113: regulation of seed growth4.03E-03
93GO:0048444: floral organ morphogenesis4.03E-03
94GO:0019509: L-methionine salvage from methylthioadenosine4.03E-03
95GO:0030643: cellular phosphate ion homeostasis4.03E-03
96GO:0009082: branched-chain amino acid biosynthetic process4.03E-03
97GO:0034389: lipid particle organization4.03E-03
98GO:0017148: negative regulation of translation4.03E-03
99GO:0050829: defense response to Gram-negative bacterium4.76E-03
100GO:0010044: response to aluminum ion4.76E-03
101GO:0080186: developmental vegetative growth4.76E-03
102GO:0006614: SRP-dependent cotranslational protein targeting to membrane4.76E-03
103GO:0071669: plant-type cell wall organization or biogenesis4.76E-03
104GO:0008272: sulfate transport4.76E-03
105GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.53E-03
106GO:0009819: drought recovery5.53E-03
107GO:0009816: defense response to bacterium, incompatible interaction5.62E-03
108GO:0009627: systemic acquired resistance5.93E-03
109GO:0017004: cytochrome complex assembly6.33E-03
110GO:0006002: fructose 6-phosphate metabolic process6.33E-03
111GO:0010417: glucuronoxylan biosynthetic process6.33E-03
112GO:0009097: isoleucine biosynthetic process6.33E-03
113GO:0010112: regulation of systemic acquired resistance7.19E-03
114GO:0009056: catabolic process7.19E-03
115GO:0009835: fruit ripening7.19E-03
116GO:0009751: response to salicylic acid7.59E-03
117GO:0010150: leaf senescence7.97E-03
118GO:1900426: positive regulation of defense response to bacterium8.07E-03
119GO:0009098: leucine biosynthetic process8.07E-03
120GO:0008152: metabolic process8.99E-03
121GO:0000103: sulfate assimilation9.00E-03
122GO:0006032: chitin catabolic process9.00E-03
123GO:0034599: cellular response to oxidative stress9.20E-03
124GO:0000272: polysaccharide catabolic process9.96E-03
125GO:0006839: mitochondrial transport1.00E-02
126GO:0042542: response to hydrogen peroxide1.09E-02
127GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.10E-02
128GO:0071365: cellular response to auxin stimulus1.10E-02
129GO:0000266: mitochondrial fission1.10E-02
130GO:0051707: response to other organism1.14E-02
131GO:0000209: protein polyubiquitination1.18E-02
132GO:0055046: microgametogenesis1.20E-02
133GO:2000012: regulation of auxin polar transport1.20E-02
134GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.20E-02
135GO:0055114: oxidation-reduction process1.25E-02
136GO:0002237: response to molecule of bacterial origin1.31E-02
137GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.38E-02
138GO:0007033: vacuole organization1.42E-02
139GO:0010053: root epidermal cell differentiation1.42E-02
140GO:0007031: peroxisome organization1.42E-02
141GO:0007030: Golgi organization1.42E-02
142GO:0000162: tryptophan biosynthetic process1.53E-02
143GO:0034976: response to endoplasmic reticulum stress1.53E-02
144GO:0009863: salicylic acid mediated signaling pathway1.65E-02
145GO:0030150: protein import into mitochondrial matrix1.65E-02
146GO:0006417: regulation of translation1.70E-02
147GO:0010073: meristem maintenance1.77E-02
148GO:0051302: regulation of cell division1.77E-02
149GO:0006874: cellular calcium ion homeostasis1.77E-02
150GO:0019915: lipid storage1.89E-02
151GO:0009269: response to desiccation1.89E-02
152GO:0031348: negative regulation of defense response2.01E-02
153GO:0030433: ubiquitin-dependent ERAD pathway2.01E-02
154GO:0010227: floral organ abscission2.14E-02
155GO:0009693: ethylene biosynthetic process2.14E-02
156GO:0045893: positive regulation of transcription, DNA-templated2.26E-02
157GO:0009306: protein secretion2.27E-02
158GO:0009561: megagametogenesis2.27E-02
159GO:0045454: cell redox homeostasis2.29E-02
160GO:0042147: retrograde transport, endosome to Golgi2.41E-02
161GO:0006635: fatty acid beta-oxidation3.12E-02
162GO:0000302: response to reactive oxygen species3.12E-02
163GO:0002229: defense response to oomycetes3.12E-02
164GO:0006891: intra-Golgi vesicle-mediated transport3.12E-02
165GO:1901657: glycosyl compound metabolic process3.42E-02
166GO:0019760: glucosinolate metabolic process3.58E-02
167GO:0006464: cellular protein modification process3.58E-02
168GO:0046686: response to cadmium ion3.75E-02
169GO:0045490: pectin catabolic process3.78E-02
170GO:0009615: response to virus4.05E-02
171GO:0006906: vesicle fusion4.38E-02
172GO:0016311: dephosphorylation4.72E-02
173GO:0009817: defense response to fungus, incompatible interaction4.89E-02
RankGO TermAdjusted P value
1GO:0005046: KDEL sequence binding0.00E+00
2GO:0016504: peptidase activator activity0.00E+00
3GO:0034338: short-chain carboxylesterase activity0.00E+00
4GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
5GO:0016229: steroid dehydrogenase activity0.00E+00
6GO:0033759: flavone synthase activity0.00E+00
7GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
8GO:0070577: lysine-acetylated histone binding0.00E+00
9GO:0070401: NADP+ binding0.00E+00
10GO:0047844: deoxycytidine deaminase activity0.00E+00
11GO:0008320: protein transmembrane transporter activity5.75E-06
12GO:0102391: decanoate--CoA ligase activity1.95E-04
13GO:0004467: long-chain fatty acid-CoA ligase activity2.54E-04
14GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.11E-04
15GO:0010179: IAA-Ala conjugate hydrolase activity3.11E-04
16GO:0003987: acetate-CoA ligase activity3.11E-04
17GO:0004425: indole-3-glycerol-phosphate synthase activity3.11E-04
18GO:0032266: phosphatidylinositol-3-phosphate binding3.11E-04
19GO:0004348: glucosylceramidase activity3.11E-04
20GO:0030942: endoplasmic reticulum signal peptide binding3.11E-04
21GO:0004033: aldo-keto reductase (NADP) activity3.21E-04
22GO:0015117: thiosulfate transmembrane transporter activity6.81E-04
23GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity6.81E-04
24GO:0010331: gibberellin binding6.81E-04
25GO:0010297: heteropolysaccharide binding6.81E-04
26GO:0004617: phosphoglycerate dehydrogenase activity6.81E-04
27GO:0003994: aconitate hydratase activity6.81E-04
28GO:0008805: carbon-monoxide oxygenase activity6.81E-04
29GO:0008428: ribonuclease inhibitor activity6.81E-04
30GO:0050736: O-malonyltransferase activity6.81E-04
31GO:1901677: phosphate transmembrane transporter activity6.81E-04
32GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity1.10E-03
33GO:0005310: dicarboxylic acid transmembrane transporter activity1.10E-03
34GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.10E-03
35GO:0015141: succinate transmembrane transporter activity1.10E-03
36GO:0031418: L-ascorbic acid binding1.50E-03
37GO:0016656: monodehydroascorbate reductase (NADH) activity1.58E-03
38GO:0052656: L-isoleucine transaminase activity1.58E-03
39GO:0008106: alcohol dehydrogenase (NADP+) activity1.58E-03
40GO:0052654: L-leucine transaminase activity1.58E-03
41GO:0017077: oxidative phosphorylation uncoupler activity1.58E-03
42GO:0052655: L-valine transaminase activity1.58E-03
43GO:0015131: oxaloacetate transmembrane transporter activity1.58E-03
44GO:0035529: NADH pyrophosphatase activity1.58E-03
45GO:0004449: isocitrate dehydrogenase (NAD+) activity1.58E-03
46GO:0010178: IAA-amino acid conjugate hydrolase activity1.58E-03
47GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.12E-03
48GO:0046923: ER retention sequence binding2.12E-03
49GO:0004084: branched-chain-amino-acid transaminase activity2.12E-03
50GO:0070628: proteasome binding2.12E-03
51GO:0047134: protein-disulfide reductase activity2.56E-03
52GO:0047631: ADP-ribose diphosphatase activity2.71E-03
53GO:0008948: oxaloacetate decarboxylase activity2.71E-03
54GO:0004623: phospholipase A2 activity2.71E-03
55GO:0004791: thioredoxin-disulfide reductase activity3.20E-03
56GO:0000210: NAD+ diphosphatase activity3.35E-03
57GO:0016208: AMP binding3.35E-03
58GO:0035252: UDP-xylosyltransferase activity3.35E-03
59GO:0004656: procollagen-proline 4-dioxygenase activity4.03E-03
60GO:0015217: ADP transmembrane transporter activity4.03E-03
61GO:0004126: cytidine deaminase activity4.03E-03
62GO:0005347: ATP transmembrane transporter activity4.03E-03
63GO:0015035: protein disulfide oxidoreductase activity4.12E-03
64GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.19E-03
65GO:0008237: metallopeptidase activity4.73E-03
66GO:0003872: 6-phosphofructokinase activity4.76E-03
67GO:0015140: malate transmembrane transporter activity4.76E-03
68GO:0004708: MAP kinase kinase activity5.53E-03
69GO:0004714: transmembrane receptor protein tyrosine kinase activity5.53E-03
70GO:0008312: 7S RNA binding5.53E-03
71GO:0052747: sinapyl alcohol dehydrogenase activity5.53E-03
72GO:0004806: triglyceride lipase activity6.26E-03
73GO:0004630: phospholipase D activity6.33E-03
74GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity6.33E-03
75GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity7.19E-03
76GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors8.80E-03
77GO:0004568: chitinase activity9.00E-03
78GO:0045551: cinnamyl-alcohol dehydrogenase activity1.10E-02
79GO:0015116: sulfate transmembrane transporter activity1.10E-02
80GO:0005198: structural molecule activity1.28E-02
81GO:0031624: ubiquitin conjugating enzyme binding1.31E-02
82GO:0051287: NAD binding1.38E-02
83GO:0005217: intracellular ligand-gated ion channel activity1.42E-02
84GO:0008061: chitin binding1.42E-02
85GO:0003712: transcription cofactor activity1.42E-02
86GO:0004970: ionotropic glutamate receptor activity1.42E-02
87GO:0051536: iron-sulfur cluster binding1.65E-02
88GO:0043130: ubiquitin binding1.65E-02
89GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.01E-02
90GO:0003727: single-stranded RNA binding2.27E-02
91GO:0003756: protein disulfide isomerase activity2.27E-02
92GO:0005102: receptor binding2.41E-02
93GO:0016758: transferase activity, transferring hexosyl groups2.67E-02
94GO:0001085: RNA polymerase II transcription factor binding2.68E-02
95GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.82E-02
96GO:0010181: FMN binding2.83E-02
97GO:0004872: receptor activity2.97E-02
98GO:0016791: phosphatase activity3.58E-02
99GO:0015297: antiporter activity3.61E-02
100GO:0008483: transaminase activity3.73E-02
101GO:0016722: oxidoreductase activity, oxidizing metal ions3.73E-02
102GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.73E-02
103GO:0016597: amino acid binding3.89E-02
104GO:0008194: UDP-glycosyltransferase activity4.23E-02
105GO:0030247: polysaccharide binding4.55E-02
106GO:0102483: scopolin beta-glucosidase activity4.55E-02
107GO:0005509: calcium ion binding4.60E-02
108GO:0042802: identical protein binding4.79E-02
RankGO TermAdjusted P value
1GO:0005794: Golgi apparatus1.90E-05
2GO:0005783: endoplasmic reticulum3.19E-05
3GO:0005789: endoplasmic reticulum membrane3.21E-05
4GO:0005801: cis-Golgi network1.95E-04
5GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane2.54E-04
6GO:0045252: oxoglutarate dehydrogenase complex3.11E-04
7GO:0005779: integral component of peroxisomal membrane3.94E-04
8GO:0016021: integral component of membrane3.95E-04
9GO:0031901: early endosome membrane4.73E-04
10GO:0017119: Golgi transport complex6.53E-04
11GO:0000814: ESCRT II complex6.81E-04
12GO:0030134: ER to Golgi transport vesicle6.81E-04
13GO:0005788: endoplasmic reticulum lumen7.21E-04
14GO:0005768: endosome1.43E-03
15GO:0030658: transport vesicle membrane1.58E-03
16GO:0005743: mitochondrial inner membrane1.69E-03
17GO:0005945: 6-phosphofructokinase complex2.71E-03
18GO:0005802: trans-Golgi network3.66E-03
19GO:0005829: cytosol3.93E-03
20GO:0030173: integral component of Golgi membrane4.03E-03
21GO:0032580: Golgi cisterna membrane4.45E-03
22GO:0005886: plasma membrane4.48E-03
23GO:0005778: peroxisomal membrane4.73E-03
24GO:0009986: cell surface4.76E-03
25GO:0005811: lipid particle6.33E-03
26GO:0009514: glyoxysome6.33E-03
27GO:0005786: signal recognition particle, endoplasmic reticulum targeting6.33E-03
28GO:0030665: clathrin-coated vesicle membrane8.07E-03
29GO:0005737: cytoplasm1.32E-02
30GO:0005769: early endosome1.53E-02
31GO:0005839: proteasome core complex1.89E-02
32GO:0005741: mitochondrial outer membrane1.89E-02
33GO:0031410: cytoplasmic vesicle2.01E-02
34GO:0005777: peroxisome2.26E-02
35GO:0005744: mitochondrial inner membrane presequence translocase complex2.27E-02
36GO:0005774: vacuolar membrane2.58E-02
37GO:0009506: plasmodesma2.66E-02
38GO:0005770: late endosome2.68E-02
39GO:0005623: cell2.82E-02
40GO:0019898: extrinsic component of membrane2.97E-02
41GO:0009504: cell plate2.97E-02
42GO:0031965: nuclear membrane2.97E-02
43GO:0016592: mediator complex3.27E-02
44GO:0071944: cell periphery3.42E-02
45GO:0031225: anchored component of membrane3.55E-02
46GO:0005667: transcription factor complex4.38E-02
47GO:0000151: ubiquitin ligase complex4.89E-02
48GO:0046658: anchored component of plasma membrane4.98E-02
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Gene type



Gene DE type