Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G27600

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1902001: fatty acid transmembrane transport0.00E+00
2GO:1902289: negative regulation of defense response to oomycetes0.00E+00
3GO:0005993: trehalose catabolic process0.00E+00
4GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
5GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
6GO:0090400: stress-induced premature senescence0.00E+00
7GO:0080149: sucrose induced translational repression0.00E+00
8GO:0018063: cytochrome c-heme linkage0.00E+00
9GO:1902009: positive regulation of toxin transport0.00E+00
10GO:0051553: flavone biosynthetic process0.00E+00
11GO:1904250: positive regulation of age-related resistance0.00E+00
12GO:0072722: response to amitrole0.00E+00
13GO:0071985: multivesicular body sorting pathway0.00E+00
14GO:0010055: atrichoblast differentiation0.00E+00
15GO:1900057: positive regulation of leaf senescence7.60E-08
16GO:0000162: tryptophan biosynthetic process4.97E-06
17GO:0006605: protein targeting1.14E-05
18GO:0051707: response to other organism3.29E-05
19GO:0009636: response to toxic substance4.31E-05
20GO:0051607: defense response to virus7.73E-05
21GO:0015031: protein transport1.30E-04
22GO:1990641: response to iron ion starvation3.47E-04
23GO:0010230: alternative respiration3.47E-04
24GO:0006680: glucosylceramide catabolic process3.47E-04
25GO:0019478: D-amino acid catabolic process3.47E-04
26GO:1900384: regulation of flavonol biosynthetic process3.47E-04
27GO:0032107: regulation of response to nutrient levels3.47E-04
28GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.76E-04
29GO:0006102: isocitrate metabolic process3.76E-04
30GO:0016559: peroxisome fission3.76E-04
31GO:0010150: leaf senescence4.04E-04
32GO:0006623: protein targeting to vacuole4.70E-04
33GO:0010112: regulation of systemic acquired resistance5.52E-04
34GO:0055088: lipid homeostasis7.56E-04
35GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex7.56E-04
36GO:0006101: citrate metabolic process7.56E-04
37GO:0015908: fatty acid transport7.56E-04
38GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine7.56E-04
39GO:0051252: regulation of RNA metabolic process7.56E-04
40GO:0071668: plant-type cell wall assembly7.56E-04
41GO:0080151: positive regulation of salicylic acid mediated signaling pathway7.56E-04
42GO:0009684: indoleacetic acid biosynthetic process8.76E-04
43GO:0009627: systemic acquired resistance9.40E-04
44GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity1.22E-03
45GO:0061158: 3'-UTR-mediated mRNA destabilization1.22E-03
46GO:0002230: positive regulation of defense response to virus by host1.22E-03
47GO:0080163: regulation of protein serine/threonine phosphatase activity1.22E-03
48GO:0044375: regulation of peroxisome size1.22E-03
49GO:0071398: cellular response to fatty acid1.22E-03
50GO:0072661: protein targeting to plasma membrane1.22E-03
51GO:0010476: gibberellin mediated signaling pathway1.22E-03
52GO:0010325: raffinose family oligosaccharide biosynthetic process1.22E-03
53GO:0009410: response to xenobiotic stimulus1.22E-03
54GO:0010272: response to silver ion1.22E-03
55GO:0016192: vesicle-mediated transport1.40E-03
56GO:0090351: seedling development1.43E-03
57GO:0006099: tricarboxylic acid cycle1.62E-03
58GO:0070301: cellular response to hydrogen peroxide1.76E-03
59GO:0002239: response to oomycetes1.76E-03
60GO:0030150: protein import into mitochondrial matrix1.76E-03
61GO:1902290: positive regulation of defense response to oomycetes1.76E-03
62GO:0080024: indolebutyric acid metabolic process1.76E-03
63GO:0055070: copper ion homeostasis1.76E-03
64GO:0006886: intracellular protein transport1.86E-03
65GO:0071456: cellular response to hypoxia2.33E-03
66GO:0048830: adventitious root development2.37E-03
67GO:1902584: positive regulation of response to water deprivation2.37E-03
68GO:0006621: protein retention in ER lumen2.37E-03
69GO:1901002: positive regulation of response to salt stress2.37E-03
70GO:0015867: ATP transport2.37E-03
71GO:0010188: response to microbial phytotoxin2.37E-03
72GO:0009939: positive regulation of gibberellic acid mediated signaling pathway2.37E-03
73GO:0042742: defense response to bacterium2.58E-03
74GO:0006979: response to oxidative stress2.63E-03
75GO:0045927: positive regulation of growth3.03E-03
76GO:0046283: anthocyanin-containing compound metabolic process3.03E-03
77GO:0006564: L-serine biosynthetic process3.03E-03
78GO:0008152: metabolic process3.03E-03
79GO:0097428: protein maturation by iron-sulfur cluster transfer3.03E-03
80GO:0006097: glyoxylate cycle3.03E-03
81GO:0009229: thiamine diphosphate biosynthetic process3.03E-03
82GO:0006662: glycerol ether metabolic process3.49E-03
83GO:0009920: cell plate formation involved in plant-type cell wall biogenesis3.74E-03
84GO:1900425: negative regulation of defense response to bacterium3.74E-03
85GO:0009228: thiamine biosynthetic process3.74E-03
86GO:0006014: D-ribose metabolic process3.74E-03
87GO:0009759: indole glucosinolate biosynthetic process3.74E-03
88GO:0015866: ADP transport3.74E-03
89GO:0006777: Mo-molybdopterin cofactor biosynthetic process3.74E-03
90GO:0010256: endomembrane system organization3.74E-03
91GO:0009620: response to fungus4.34E-03
92GO:0030643: cellular phosphate ion homeostasis4.50E-03
93GO:0009082: branched-chain amino acid biosynthetic process4.50E-03
94GO:0034389: lipid particle organization4.50E-03
95GO:0017148: negative regulation of translation4.50E-03
96GO:0009099: valine biosynthetic process4.50E-03
97GO:0080113: regulation of seed growth4.50E-03
98GO:0048444: floral organ morphogenesis4.50E-03
99GO:0080186: developmental vegetative growth5.32E-03
100GO:0006614: SRP-dependent cotranslational protein targeting to membrane5.32E-03
101GO:0071669: plant-type cell wall organization or biogenesis5.32E-03
102GO:0000122: negative regulation of transcription from RNA polymerase II promoter5.32E-03
103GO:1902074: response to salt5.32E-03
104GO:0010044: response to aluminum ion5.32E-03
105GO:0009819: drought recovery6.17E-03
106GO:0009850: auxin metabolic process6.17E-03
107GO:0043068: positive regulation of programmed cell death6.17E-03
108GO:0010029: regulation of seed germination6.59E-03
109GO:0009097: isoleucine biosynthetic process7.08E-03
110GO:0006997: nucleus organization7.08E-03
111GO:0010204: defense response signaling pathway, resistance gene-independent7.08E-03
112GO:0017004: cytochrome complex assembly7.08E-03
113GO:0010208: pollen wall assembly7.08E-03
114GO:0007338: single fertilization8.04E-03
115GO:0009056: catabolic process8.04E-03
116GO:0009835: fruit ripening8.04E-03
117GO:0009098: leucine biosynthetic process9.03E-03
118GO:0008202: steroid metabolic process9.03E-03
119GO:1900426: positive regulation of defense response to bacterium9.03E-03
120GO:0048527: lateral root development9.43E-03
121GO:0051555: flavonol biosynthetic process1.01E-02
122GO:0009870: defense response signaling pathway, resistance gene-dependent1.01E-02
123GO:0000103: sulfate assimilation1.01E-02
124GO:0006032: chitin catabolic process1.01E-02
125GO:0009688: abscisic acid biosynthetic process1.01E-02
126GO:0009641: shade avoidance1.01E-02
127GO:0034599: cellular response to oxidative stress1.08E-02
128GO:0007275: multicellular organism development1.11E-02
129GO:0019684: photosynthesis, light reaction1.12E-02
130GO:0009682: induced systemic resistance1.12E-02
131GO:0052544: defense response by callose deposition in cell wall1.12E-02
132GO:0000272: polysaccharide catabolic process1.12E-02
133GO:0009617: response to bacterium1.23E-02
134GO:0045037: protein import into chloroplast stroma1.23E-02
135GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.23E-02
136GO:0071365: cellular response to auxin stimulus1.23E-02
137GO:0000266: mitochondrial fission1.23E-02
138GO:0042542: response to hydrogen peroxide1.28E-02
139GO:2000012: regulation of auxin polar transport1.34E-02
140GO:0010102: lateral root morphogenesis1.34E-02
141GO:0055046: microgametogenesis1.34E-02
142GO:0002237: response to molecule of bacterial origin1.46E-02
143GO:0007031: peroxisome organization1.59E-02
144GO:0007033: vacuole organization1.59E-02
145GO:0009863: salicylic acid mediated signaling pathway1.85E-02
146GO:0080147: root hair cell development1.85E-02
147GO:0006289: nucleotide-excision repair1.85E-02
148GO:0006970: response to osmotic stress1.87E-02
149GO:0046686: response to cadmium ion1.87E-02
150GO:0006874: cellular calcium ion homeostasis1.98E-02
151GO:0051302: regulation of cell division1.98E-02
152GO:0006334: nucleosome assembly2.12E-02
153GO:0019915: lipid storage2.12E-02
154GO:0009269: response to desiccation2.12E-02
155GO:0016998: cell wall macromolecule catabolic process2.12E-02
156GO:0009814: defense response, incompatible interaction2.26E-02
157GO:0030433: ubiquitin-dependent ERAD pathway2.26E-02
158GO:0031348: negative regulation of defense response2.26E-02
159GO:0009693: ethylene biosynthetic process2.40E-02
160GO:0009411: response to UV2.40E-02
161GO:0006012: galactose metabolic process2.40E-02
162GO:0009561: megagametogenesis2.55E-02
163GO:0042147: retrograde transport, endosome to Golgi2.70E-02
164GO:0006508: proteolysis2.81E-02
165GO:0010118: stomatal movement2.85E-02
166GO:0006520: cellular amino acid metabolic process3.01E-02
167GO:0010182: sugar mediated signaling pathway3.01E-02
168GO:0006814: sodium ion transport3.17E-02
169GO:0019252: starch biosynthetic process3.33E-02
170GO:0009651: response to salt stress3.36E-02
171GO:0071554: cell wall organization or biogenesis3.50E-02
172GO:0000302: response to reactive oxygen species3.50E-02
173GO:0002229: defense response to oomycetes3.50E-02
174GO:0006891: intra-Golgi vesicle-mediated transport3.50E-02
175GO:0006635: fatty acid beta-oxidation3.50E-02
176GO:0006629: lipid metabolic process3.63E-02
177GO:0055114: oxidation-reduction process3.89E-02
178GO:0019760: glucosinolate metabolic process4.01E-02
179GO:0009567: double fertilization forming a zygote and endosperm4.01E-02
180GO:0040008: regulation of growth4.23E-02
181GO:0009615: response to virus4.55E-02
182GO:0009816: defense response to bacterium, incompatible interaction4.73E-02
183GO:0006906: vesicle fusion4.91E-02
RankGO TermAdjusted P value
1GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
2GO:0070401: NADP+ binding0.00E+00
3GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity0.00E+00
4GO:0102867: molybdenum cofactor sulfurtransferase activity0.00E+00
5GO:0050334: thiaminase activity0.00E+00
6GO:0004555: alpha,alpha-trehalase activity0.00E+00
7GO:0005046: KDEL sequence binding0.00E+00
8GO:0051499: D-aminoacyl-tRNA deacylase activity0.00E+00
9GO:0016229: steroid dehydrogenase activity0.00E+00
10GO:0033759: flavone synthase activity0.00E+00
11GO:0010178: IAA-amino acid conjugate hydrolase activity4.24E-05
12GO:0004834: tryptophan synthase activity7.53E-05
13GO:0004656: procollagen-proline 4-dioxygenase activity2.30E-04
14GO:0008320: protein transmembrane transporter activity2.99E-04
15GO:0004425: indole-3-glycerol-phosphate synthase activity3.47E-04
16GO:0015927: trehalase activity3.47E-04
17GO:0032266: phosphatidylinositol-3-phosphate binding3.47E-04
18GO:0004348: glucosylceramidase activity3.47E-04
19GO:0030942: endoplasmic reticulum signal peptide binding3.47E-04
20GO:0009000: selenocysteine lyase activity3.47E-04
21GO:0015245: fatty acid transporter activity3.47E-04
22GO:0016920: pyroglutamyl-peptidase activity3.47E-04
23GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.47E-04
24GO:0010179: IAA-Ala conjugate hydrolase activity3.47E-04
25GO:0047893: flavonol 3-O-glucosyltransferase activity3.76E-04
26GO:0004033: aldo-keto reductase (NADP) activity3.76E-04
27GO:0008237: metallopeptidase activity7.07E-04
28GO:0000774: adenyl-nucleotide exchange factor activity7.56E-04
29GO:0032934: sterol binding7.56E-04
30GO:0008428: ribonuclease inhibitor activity7.56E-04
31GO:0050736: O-malonyltransferase activity7.56E-04
32GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity7.56E-04
33GO:0010331: gibberellin binding7.56E-04
34GO:0004617: phosphoglycerate dehydrogenase activity7.56E-04
35GO:0003994: aconitate hydratase activity7.56E-04
36GO:0004806: triglyceride lipase activity1.00E-03
37GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.22E-03
38GO:0043169: cation binding1.22E-03
39GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.22E-03
40GO:0008265: Mo-molybdopterin cofactor sulfurase activity1.22E-03
41GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.54E-03
42GO:0035529: NADH pyrophosphatase activity1.76E-03
43GO:0004449: isocitrate dehydrogenase (NAD+) activity1.76E-03
44GO:0005432: calcium:sodium antiporter activity1.76E-03
45GO:0016656: monodehydroascorbate reductase (NADH) activity1.76E-03
46GO:0052656: L-isoleucine transaminase activity1.76E-03
47GO:0008106: alcohol dehydrogenase (NADP+) activity1.76E-03
48GO:0052654: L-leucine transaminase activity1.76E-03
49GO:0031418: L-ascorbic acid binding1.76E-03
50GO:0052655: L-valine transaminase activity1.76E-03
51GO:0035251: UDP-glucosyltransferase activity2.13E-03
52GO:0046923: ER retention sequence binding2.37E-03
53GO:0004084: branched-chain-amino-acid transaminase activity2.37E-03
54GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.37E-03
55GO:0005198: structural molecule activity2.46E-03
56GO:0047134: protein-disulfide reductase activity3.00E-03
57GO:0008948: oxaloacetate decarboxylase activity3.03E-03
58GO:0047631: ADP-ribose diphosphatase activity3.03E-03
59GO:0030151: molybdenum ion binding3.03E-03
60GO:0000210: NAD+ diphosphatase activity3.74E-03
61GO:0004791: thioredoxin-disulfide reductase activity3.75E-03
62GO:0080044: quercetin 7-O-glucosyltransferase activity4.34E-03
63GO:0080043: quercetin 3-O-glucosyltransferase activity4.34E-03
64GO:0102391: decanoate--CoA ligase activity4.50E-03
65GO:0004747: ribokinase activity4.50E-03
66GO:0005347: ATP transmembrane transporter activity4.50E-03
67GO:0003978: UDP-glucose 4-epimerase activity4.50E-03
68GO:0015217: ADP transmembrane transporter activity4.50E-03
69GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.91E-03
70GO:0015035: protein disulfide oxidoreductase activity5.05E-03
71GO:0102425: myricetin 3-O-glucosyltransferase activity5.32E-03
72GO:0102360: daphnetin 3-O-glucosyltransferase activity5.32E-03
73GO:0004467: long-chain fatty acid-CoA ligase activity5.32E-03
74GO:0008483: transaminase activity5.55E-03
75GO:0008312: 7S RNA binding6.17E-03
76GO:0052747: sinapyl alcohol dehydrogenase activity6.17E-03
77GO:0008865: fructokinase activity6.17E-03
78GO:0015491: cation:cation antiporter activity6.17E-03
79GO:0016758: transferase activity, transferring hexosyl groups6.26E-03
80GO:0008142: oxysterol binding7.08E-03
81GO:0030170: pyridoxal phosphate binding7.40E-03
82GO:0042803: protein homodimerization activity7.73E-03
83GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity8.04E-03
84GO:0015297: antiporter activity9.21E-03
85GO:0004864: protein phosphatase inhibitor activity1.01E-02
86GO:0004568: chitinase activity1.01E-02
87GO:0008194: UDP-glycosyltransferase activity1.13E-02
88GO:0045551: cinnamyl-alcohol dehydrogenase activity1.23E-02
89GO:0008061: chitin binding1.59E-02
90GO:0003712: transcription cofactor activity1.59E-02
91GO:0004970: ionotropic glutamate receptor activity1.59E-02
92GO:0005217: intracellular ligand-gated ion channel activity1.59E-02
93GO:0051287: NAD binding1.62E-02
94GO:0043130: ubiquitin binding1.85E-02
95GO:0001046: core promoter sequence-specific DNA binding1.85E-02
96GO:0051536: iron-sulfur cluster binding1.85E-02
97GO:0051087: chaperone binding1.98E-02
98GO:0005509: calcium ion binding2.05E-02
99GO:0004499: N,N-dimethylaniline monooxygenase activity2.55E-02
100GO:0003727: single-stranded RNA binding2.55E-02
101GO:0005102: receptor binding2.70E-02
102GO:0010181: FMN binding3.17E-02
103GO:0004872: receptor activity3.33E-02
104GO:0016787: hydrolase activity3.39E-02
105GO:0016791: phosphatase activity4.01E-02
106GO:0016413: O-acetyltransferase activity4.36E-02
107GO:0016597: amino acid binding4.36E-02
RankGO TermAdjusted P value
1GO:0005794: Golgi apparatus5.64E-06
2GO:0005801: cis-Golgi network2.30E-04
3GO:0005789: endoplasmic reticulum membrane2.37E-04
4GO:0045252: oxoglutarate dehydrogenase complex3.47E-04
5GO:0001405: presequence translocase-associated import motor3.47E-04
6GO:0005779: integral component of peroxisomal membrane4.61E-04
7GO:0005783: endoplasmic reticulum5.64E-04
8GO:0016021: integral component of membrane6.44E-04
9GO:0030134: ER to Golgi transport vesicle7.56E-04
10GO:0000814: ESCRT II complex7.56E-04
11GO:0017119: Golgi transport complex7.61E-04
12GO:0042406: extrinsic component of endoplasmic reticulum membrane1.22E-03
13GO:0030658: transport vesicle membrane1.76E-03
14GO:0005774: vacuolar membrane2.44E-03
15GO:0000164: protein phosphatase type 1 complex3.03E-03
16GO:0005886: plasma membrane3.22E-03
17GO:0009504: cell plate4.02E-03
18GO:0031965: nuclear membrane4.02E-03
19GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane5.32E-03
20GO:0009986: cell surface5.32E-03
21GO:0005778: peroxisomal membrane5.55E-03
22GO:0005768: endosome6.47E-03
23GO:0005788: endoplasmic reticulum lumen6.59E-03
24GO:0005623: cell6.70E-03
25GO:0005786: signal recognition particle, endoplasmic reticulum targeting7.08E-03
26GO:0005811: lipid particle7.08E-03
27GO:0031901: early endosome membrane8.04E-03
28GO:0005829: cytosol8.15E-03
29GO:0005743: mitochondrial inner membrane8.86E-03
30GO:0030665: clathrin-coated vesicle membrane9.03E-03
31GO:0008540: proteasome regulatory particle, base subcomplex9.03E-03
32GO:0031902: late endosome membrane1.23E-02
33GO:0005802: trans-Golgi network1.58E-02
34GO:0005769: early endosome1.71E-02
35GO:0005741: mitochondrial outer membrane2.12E-02
36GO:0005744: mitochondrial inner membrane presequence translocase complex2.55E-02
37GO:0005770: late endosome3.01E-02
38GO:0009543: chloroplast thylakoid lumen3.22E-02
39GO:0019898: extrinsic component of membrane3.33E-02
40GO:0016592: mediator complex3.67E-02
41GO:0032580: Golgi cisterna membrane4.01E-02
42GO:0009506: plasmodesma4.07E-02
43GO:0009705: plant-type vacuole membrane4.43E-02
44GO:0031225: anchored component of membrane4.47E-02
45GO:0005737: cytoplasm4.95E-02
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Gene type



Gene DE type