GO Enrichment Analysis of Co-expressed Genes with
AT5G27390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010412: mannan metabolic process | 0.00E+00 |
| 2 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 3 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 6.26E-05 |
| 4 | GO:0051775: response to redox state | 6.26E-05 |
| 5 | GO:1904966: positive regulation of vitamin E biosynthetic process | 6.26E-05 |
| 6 | GO:1904964: positive regulation of phytol biosynthetic process | 6.26E-05 |
| 7 | GO:0042371: vitamin K biosynthetic process | 6.26E-05 |
| 8 | GO:0019684: photosynthesis, light reaction | 7.62E-05 |
| 9 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.52E-04 |
| 10 | GO:0015979: photosynthesis | 1.65E-04 |
| 11 | GO:0010581: regulation of starch biosynthetic process | 2.57E-04 |
| 12 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 2.57E-04 |
| 13 | GO:0006107: oxaloacetate metabolic process | 3.73E-04 |
| 14 | GO:0009226: nucleotide-sugar biosynthetic process | 3.73E-04 |
| 15 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 3.73E-04 |
| 16 | GO:0046355: mannan catabolic process | 4.99E-04 |
| 17 | GO:2000122: negative regulation of stomatal complex development | 4.99E-04 |
| 18 | GO:0006734: NADH metabolic process | 4.99E-04 |
| 19 | GO:0009107: lipoate biosynthetic process | 6.32E-04 |
| 20 | GO:0010375: stomatal complex patterning | 6.32E-04 |
| 21 | GO:0045038: protein import into chloroplast thylakoid membrane | 6.32E-04 |
| 22 | GO:0032973: amino acid export | 7.73E-04 |
| 23 | GO:0006655: phosphatidylglycerol biosynthetic process | 7.73E-04 |
| 24 | GO:0050665: hydrogen peroxide biosynthetic process | 7.73E-04 |
| 25 | GO:0017148: negative regulation of translation | 9.20E-04 |
| 26 | GO:0009854: oxidative photosynthetic carbon pathway | 9.20E-04 |
| 27 | GO:0010374: stomatal complex development | 1.07E-03 |
| 28 | GO:0043090: amino acid import | 1.07E-03 |
| 29 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.07E-03 |
| 30 | GO:0010444: guard mother cell differentiation | 1.07E-03 |
| 31 | GO:0006400: tRNA modification | 1.07E-03 |
| 32 | GO:0007155: cell adhesion | 1.24E-03 |
| 33 | GO:0042255: ribosome assembly | 1.24E-03 |
| 34 | GO:0006353: DNA-templated transcription, termination | 1.24E-03 |
| 35 | GO:0006605: protein targeting | 1.24E-03 |
| 36 | GO:0010492: maintenance of shoot apical meristem identity | 1.24E-03 |
| 37 | GO:0017004: cytochrome complex assembly | 1.41E-03 |
| 38 | GO:0019430: removal of superoxide radicals | 1.41E-03 |
| 39 | GO:0010052: guard cell differentiation | 1.41E-03 |
| 40 | GO:0010204: defense response signaling pathway, resistance gene-independent | 1.41E-03 |
| 41 | GO:0032544: plastid translation | 1.41E-03 |
| 42 | GO:0048507: meristem development | 1.58E-03 |
| 43 | GO:0080144: amino acid homeostasis | 1.58E-03 |
| 44 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.77E-03 |
| 45 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.17E-03 |
| 46 | GO:0043085: positive regulation of catalytic activity | 2.17E-03 |
| 47 | GO:1903507: negative regulation of nucleic acid-templated transcription | 2.17E-03 |
| 48 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.17E-03 |
| 49 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.37E-03 |
| 50 | GO:0009767: photosynthetic electron transport chain | 2.58E-03 |
| 51 | GO:0006108: malate metabolic process | 2.58E-03 |
| 52 | GO:0006730: one-carbon metabolic process | 4.24E-03 |
| 53 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 4.24E-03 |
| 54 | GO:0042127: regulation of cell proliferation | 4.76E-03 |
| 55 | GO:0009306: protein secretion | 4.76E-03 |
| 56 | GO:0008380: RNA splicing | 4.84E-03 |
| 57 | GO:0008033: tRNA processing | 5.31E-03 |
| 58 | GO:0032502: developmental process | 6.76E-03 |
| 59 | GO:0010027: thylakoid membrane organization | 8.35E-03 |
| 60 | GO:0015995: chlorophyll biosynthetic process | 9.36E-03 |
| 61 | GO:0010411: xyloglucan metabolic process | 9.36E-03 |
| 62 | GO:0018298: protein-chromophore linkage | 1.01E-02 |
| 63 | GO:0006099: tricarboxylic acid cycle | 1.23E-02 |
| 64 | GO:0006839: mitochondrial transport | 1.30E-02 |
| 65 | GO:0042546: cell wall biogenesis | 1.46E-02 |
| 66 | GO:0031347: regulation of defense response | 1.63E-02 |
| 67 | GO:0006486: protein glycosylation | 1.75E-02 |
| 68 | GO:0043086: negative regulation of catalytic activity | 1.98E-02 |
| 69 | GO:0048316: seed development | 2.02E-02 |
| 70 | GO:0051726: regulation of cell cycle | 2.35E-02 |
| 71 | GO:0055085: transmembrane transport | 2.60E-02 |
| 72 | GO:0042744: hydrogen peroxide catabolic process | 2.90E-02 |
| 73 | GO:0009658: chloroplast organization | 4.54E-02 |
| 74 | GO:0007049: cell cycle | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 2 | GO:0005048: signal sequence binding | 0.00E+00 |
| 3 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 4 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 5 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 6.26E-05 |
| 6 | GO:0008746: NAD(P)+ transhydrogenase activity | 6.26E-05 |
| 7 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 1.52E-04 |
| 8 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.52E-04 |
| 9 | GO:0016992: lipoate synthase activity | 2.57E-04 |
| 10 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 3.73E-04 |
| 11 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 3.73E-04 |
| 12 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 3.73E-04 |
| 13 | GO:0043023: ribosomal large subunit binding | 3.73E-04 |
| 14 | GO:0016985: mannan endo-1,4-beta-mannosidase activity | 4.99E-04 |
| 15 | GO:0004045: aminoacyl-tRNA hydrolase activity | 4.99E-04 |
| 16 | GO:0043495: protein anchor | 4.99E-04 |
| 17 | GO:0008891: glycolate oxidase activity | 4.99E-04 |
| 18 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 4.99E-04 |
| 19 | GO:0004040: amidase activity | 6.32E-04 |
| 20 | GO:0016615: malate dehydrogenase activity | 7.73E-04 |
| 21 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 9.20E-04 |
| 22 | GO:0030060: L-malate dehydrogenase activity | 9.20E-04 |
| 23 | GO:0019899: enzyme binding | 1.07E-03 |
| 24 | GO:0008312: 7S RNA binding | 1.24E-03 |
| 25 | GO:0003690: double-stranded DNA binding | 1.73E-03 |
| 26 | GO:0008047: enzyme activator activity | 1.96E-03 |
| 27 | GO:0008378: galactosyltransferase activity | 2.37E-03 |
| 28 | GO:0005528: FK506 binding | 3.49E-03 |
| 29 | GO:0003714: transcription corepressor activity | 3.49E-03 |
| 30 | GO:0022891: substrate-specific transmembrane transporter activity | 4.50E-03 |
| 31 | GO:0003727: single-stranded RNA binding | 4.76E-03 |
| 32 | GO:0004791: thioredoxin-disulfide reductase activity | 5.88E-03 |
| 33 | GO:0010181: FMN binding | 5.88E-03 |
| 34 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 6.46E-03 |
| 35 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.07E-03 |
| 36 | GO:0016168: chlorophyll binding | 8.68E-03 |
| 37 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 9.36E-03 |
| 38 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.01E-02 |
| 39 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.08E-02 |
| 40 | GO:0003924: GTPase activity | 1.15E-02 |
| 41 | GO:0003746: translation elongation factor activity | 1.19E-02 |
| 42 | GO:0035091: phosphatidylinositol binding | 1.50E-02 |
| 43 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.58E-02 |
| 44 | GO:0015171: amino acid transmembrane transporter activity | 1.89E-02 |
| 45 | GO:0016874: ligase activity | 2.16E-02 |
| 46 | GO:0016746: transferase activity, transferring acyl groups | 2.30E-02 |
| 47 | GO:0016758: transferase activity, transferring hexosyl groups | 2.60E-02 |
| 48 | GO:0019843: rRNA binding | 2.65E-02 |
| 49 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.70E-02 |
| 50 | GO:0046910: pectinesterase inhibitor activity | 3.17E-02 |
| 51 | GO:0005525: GTP binding | 3.36E-02 |
| 52 | GO:0005509: calcium ion binding | 3.81E-02 |
| 53 | GO:0042802: identical protein binding | 3.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.81E-15 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 4.54E-08 |
| 3 | GO:0009654: photosystem II oxygen evolving complex | 3.95E-06 |
| 4 | GO:0009570: chloroplast stroma | 5.71E-06 |
| 5 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 6.26E-05 |
| 6 | GO:0009344: nitrite reductase complex [NAD(P)H] | 6.26E-05 |
| 7 | GO:0080085: signal recognition particle, chloroplast targeting | 1.52E-04 |
| 8 | GO:0042651: thylakoid membrane | 1.88E-04 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 3.19E-04 |
| 10 | GO:0019898: extrinsic component of membrane | 3.99E-04 |
| 11 | GO:0009579: thylakoid | 8.17E-04 |
| 12 | GO:0009539: photosystem II reaction center | 1.41E-03 |
| 13 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.41E-03 |
| 14 | GO:0009941: chloroplast envelope | 1.42E-03 |
| 15 | GO:0030095: chloroplast photosystem II | 2.80E-03 |
| 16 | GO:0009534: chloroplast thylakoid | 4.61E-03 |
| 17 | GO:0009522: photosystem I | 5.88E-03 |
| 18 | GO:0009523: photosystem II | 6.17E-03 |
| 19 | GO:0009295: nucleoid | 7.70E-03 |
| 20 | GO:0031969: chloroplast membrane | 7.77E-03 |
| 21 | GO:0030529: intracellular ribonucleoprotein complex | 8.35E-03 |
| 22 | GO:0031977: thylakoid lumen | 1.34E-02 |
| 23 | GO:0005777: peroxisome | 2.35E-02 |
| 24 | GO:0048046: apoplast | 4.49E-02 |