Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G27360

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032206: positive regulation of telomere maintenance0.00E+00
2GO:2000505: regulation of energy homeostasis0.00E+00
3GO:0044154: histone H3-K14 acetylation0.00E+00
4GO:0010081: regulation of inflorescence meristem growth0.00E+00
5GO:0045176: apical protein localization0.00E+00
6GO:0006114: glycerol biosynthetic process0.00E+00
7GO:0000372: Group I intron splicing0.00E+00
8GO:0043972: histone H3-K23 acetylation0.00E+00
9GO:0080127: fruit septum development0.00E+00
10GO:0032212: positive regulation of telomere maintenance via telomerase0.00E+00
11GO:0000373: Group II intron splicing8.51E-07
12GO:0010239: chloroplast mRNA processing6.54E-05
13GO:0010582: floral meristem determinacy1.08E-04
14GO:0010158: abaxial cell fate specification1.76E-04
15GO:0010080: regulation of floral meristem growth4.45E-04
16GO:0043087: regulation of GTPase activity4.45E-04
17GO:2000021: regulation of ion homeostasis4.45E-04
18GO:0006436: tryptophanyl-tRNA aminoacylation4.45E-04
19GO:0000066: mitochondrial ornithine transport4.45E-04
20GO:0034757: negative regulation of iron ion transport4.45E-04
21GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process4.45E-04
22GO:0043971: histone H3-K18 acetylation4.45E-04
23GO:0019478: D-amino acid catabolic process4.45E-04
24GO:0000012: single strand break repair4.45E-04
25GO:0043266: regulation of potassium ion transport4.45E-04
26GO:0006353: DNA-templated transcription, termination5.41E-04
27GO:0009657: plastid organization6.60E-04
28GO:0009451: RNA modification8.20E-04
29GO:0001736: establishment of planar polarity9.61E-04
30GO:0010024: phytochromobilin biosynthetic process9.61E-04
31GO:0048255: mRNA stabilization9.61E-04
32GO:0006435: threonyl-tRNA aminoacylation9.61E-04
33GO:0010271: regulation of chlorophyll catabolic process9.61E-04
34GO:0045037: protein import into chloroplast stroma1.43E-03
35GO:0051604: protein maturation1.57E-03
36GO:0030029: actin filament-based process1.57E-03
37GO:0080117: secondary growth1.57E-03
38GO:0010022: meristem determinacy1.57E-03
39GO:0006094: gluconeogenesis1.62E-03
40GO:0051513: regulation of monopolar cell growth2.27E-03
41GO:0009102: biotin biosynthetic process2.27E-03
42GO:0051639: actin filament network formation2.27E-03
43GO:0034059: response to anoxia2.27E-03
44GO:0044211: CTP salvage2.27E-03
45GO:0009800: cinnamic acid biosynthetic process2.27E-03
46GO:0042989: sequestering of actin monomers2.27E-03
47GO:0010306: rhamnogalacturonan II biosynthetic process2.27E-03
48GO:2000904: regulation of starch metabolic process2.27E-03
49GO:0051781: positive regulation of cell division3.05E-03
50GO:0051764: actin crosslink formation3.05E-03
51GO:0015846: polyamine transport3.05E-03
52GO:0008295: spermidine biosynthetic process3.05E-03
53GO:0044206: UMP salvage3.05E-03
54GO:0010236: plastoquinone biosynthetic process3.90E-03
55GO:0031365: N-terminal protein amino acid modification3.90E-03
56GO:1902183: regulation of shoot apical meristem development3.90E-03
57GO:0016123: xanthophyll biosynthetic process3.90E-03
58GO:0080110: sporopollenin biosynthetic process3.90E-03
59GO:0009696: salicylic acid metabolic process3.90E-03
60GO:0030041: actin filament polymerization3.90E-03
61GO:0016117: carotenoid biosynthetic process4.34E-03
62GO:0048827: phyllome development4.83E-03
63GO:0016554: cytidine to uridine editing4.83E-03
64GO:0009920: cell plate formation involved in plant-type cell wall biogenesis4.83E-03
65GO:0006559: L-phenylalanine catabolic process4.83E-03
66GO:0006206: pyrimidine nucleobase metabolic process4.83E-03
67GO:0048831: regulation of shoot system development4.83E-03
68GO:0003006: developmental process involved in reproduction4.83E-03
69GO:0048868: pollen tube development5.06E-03
70GO:0009958: positive gravitropism5.06E-03
71GO:0009793: embryo development ending in seed dormancy5.81E-03
72GO:0010019: chloroplast-nucleus signaling pathway5.83E-03
73GO:0009648: photoperiodism5.83E-03
74GO:0042372: phylloquinone biosynthetic process5.83E-03
75GO:1901259: chloroplast rRNA processing5.83E-03
76GO:0048509: regulation of meristem development5.83E-03
77GO:0048316: seed development6.44E-03
78GO:0007264: small GTPase mediated signal transduction6.68E-03
79GO:0051510: regulation of unidimensional cell growth6.89E-03
80GO:0009610: response to symbiotic fungus6.89E-03
81GO:0006955: immune response6.89E-03
82GO:0010050: vegetative phase change6.89E-03
83GO:0045010: actin nucleation8.02E-03
84GO:0048564: photosystem I assembly8.02E-03
85GO:0070413: trehalose metabolism in response to stress8.02E-03
86GO:0009850: auxin metabolic process8.02E-03
87GO:0032544: plastid translation9.21E-03
88GO:0044030: regulation of DNA methylation9.21E-03
89GO:0071482: cellular response to light stimulus9.21E-03
90GO:0022900: electron transport chain9.21E-03
91GO:0009827: plant-type cell wall modification9.21E-03
92GO:0006098: pentose-phosphate shunt1.05E-02
93GO:0090305: nucleic acid phosphodiester bond hydrolysis1.05E-02
94GO:0048507: meristem development1.05E-02
95GO:0010206: photosystem II repair1.05E-02
96GO:2000024: regulation of leaf development1.05E-02
97GO:0046916: cellular transition metal ion homeostasis1.05E-02
98GO:0016573: histone acetylation1.18E-02
99GO:0000723: telomere maintenance1.18E-02
100GO:1900865: chloroplast RNA modification1.18E-02
101GO:0042761: very long-chain fatty acid biosynthetic process1.18E-02
102GO:0016571: histone methylation1.18E-02
103GO:0009817: defense response to fungus, incompatible interaction1.19E-02
104GO:0000160: phosphorelay signal transduction system1.25E-02
105GO:0048829: root cap development1.31E-02
106GO:0006259: DNA metabolic process1.31E-02
107GO:0019538: protein metabolic process1.31E-02
108GO:0006535: cysteine biosynthetic process from serine1.31E-02
109GO:0048765: root hair cell differentiation1.46E-02
110GO:0006265: DNA topological change1.46E-02
111GO:0006415: translational termination1.46E-02
112GO:0006839: mitochondrial transport1.72E-02
113GO:0010229: inflorescence development1.75E-02
114GO:0030036: actin cytoskeleton organization1.75E-02
115GO:0010540: basipetal auxin transport1.91E-02
116GO:0009266: response to temperature stimulus1.91E-02
117GO:0006302: double-strand break repair1.91E-02
118GO:0048467: gynoecium development1.91E-02
119GO:0010020: chloroplast fission1.91E-02
120GO:0010207: photosystem II assembly1.91E-02
121GO:0090351: seedling development2.07E-02
122GO:0080188: RNA-directed DNA methylation2.07E-02
123GO:0006863: purine nucleobase transport2.24E-02
124GO:0010025: wax biosynthetic process2.24E-02
125GO:0006289: nucleotide-excision repair2.41E-02
126GO:0005992: trehalose biosynthetic process2.41E-02
127GO:0019344: cysteine biosynthetic process2.41E-02
128GO:0009944: polarity specification of adaxial/abaxial axis2.41E-02
129GO:0030150: protein import into mitochondrial matrix2.41E-02
130GO:0006338: chromatin remodeling2.41E-02
131GO:0007010: cytoskeleton organization2.41E-02
132GO:0051017: actin filament bundle assembly2.41E-02
133GO:0010073: meristem maintenance2.59E-02
134GO:0006418: tRNA aminoacylation for protein translation2.59E-02
135GO:0006364: rRNA processing2.63E-02
136GO:0009736: cytokinin-activated signaling pathway2.63E-02
137GO:0003333: amino acid transmembrane transport2.77E-02
138GO:0016998: cell wall macromolecule catabolic process2.77E-02
139GO:0015992: proton transport2.77E-02
140GO:0016226: iron-sulfur cluster assembly2.95E-02
141GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.14E-02
142GO:0071215: cellular response to abscisic acid stimulus3.14E-02
143GO:0010584: pollen exine formation3.33E-02
144GO:0006284: base-excision repair3.33E-02
145GO:0019722: calcium-mediated signaling3.33E-02
146GO:0070417: cellular response to cold3.53E-02
147GO:0010087: phloem or xylem histogenesis3.73E-02
148GO:0010268: brassinosteroid homeostasis3.94E-02
149GO:0045489: pectin biosynthetic process3.94E-02
150GO:0010154: fruit development3.94E-02
151GO:0009416: response to light stimulus4.05E-02
152GO:0007018: microtubule-based movement4.14E-02
153GO:0007059: chromosome segregation4.14E-02
154GO:0048544: recognition of pollen4.14E-02
155GO:0048825: cotyledon development4.36E-02
156GO:0016132: brassinosteroid biosynthetic process4.57E-02
157GO:0000302: response to reactive oxygen species4.57E-02
158GO:0009058: biosynthetic process4.92E-02
RankGO TermAdjusted P value
1GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor0.00E+00
2GO:0010355: homogentisate farnesyltransferase activity0.00E+00
3GO:0043136: glycerol-3-phosphatase activity0.00E+00
4GO:0000121: glycerol-1-phosphatase activity0.00E+00
5GO:0010356: homogentisate geranylgeranyltransferase activity0.00E+00
6GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity0.00E+00
7GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity0.00E+00
8GO:0004561: alpha-N-acetylglucosaminidase activity0.00E+00
9GO:0010357: homogentisate solanesyltransferase activity0.00E+00
10GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity0.00E+00
11GO:0019808: polyamine binding0.00E+00
12GO:0008710: 8-amino-7-oxononanoate synthase activity0.00E+00
13GO:0001872: (1->3)-beta-D-glucan binding6.54E-05
14GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity4.45E-04
15GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity4.45E-04
16GO:0004830: tryptophan-tRNA ligase activity4.45E-04
17GO:0052624: 2-phytyl-1,4-naphthoquinone methyltransferase activity4.45E-04
18GO:0005227: calcium activated cation channel activity4.45E-04
19GO:0042834: peptidoglycan binding4.45E-04
20GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity4.45E-04
21GO:0005290: L-histidine transmembrane transporter activity4.45E-04
22GO:0050017: L-3-cyanoalanine synthase activity9.61E-04
23GO:0004047: aminomethyltransferase activity9.61E-04
24GO:0004766: spermidine synthase activity9.61E-04
25GO:0000064: L-ornithine transmembrane transporter activity9.61E-04
26GO:0004829: threonine-tRNA ligase activity9.61E-04
27GO:0009884: cytokinin receptor activity9.61E-04
28GO:0016805: dipeptidase activity1.57E-03
29GO:0005034: osmosensor activity1.57E-03
30GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity1.57E-03
31GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups1.57E-03
32GO:0045548: phenylalanine ammonia-lyase activity1.57E-03
33GO:0003913: DNA photolyase activity1.57E-03
34GO:0004148: dihydrolipoyl dehydrogenase activity1.57E-03
35GO:0004519: endonuclease activity1.57E-03
36GO:0005096: GTPase activator activity1.94E-03
37GO:0080031: methyl salicylate esterase activity2.27E-03
38GO:0004300: enoyl-CoA hydratase activity2.27E-03
39GO:0015189: L-lysine transmembrane transporter activity2.27E-03
40GO:0015181: arginine transmembrane transporter activity2.27E-03
41GO:0043047: single-stranded telomeric DNA binding2.27E-03
42GO:0009678: hydrogen-translocating pyrophosphatase activity2.27E-03
43GO:0016149: translation release factor activity, codon specific2.27E-03
44GO:0017172: cysteine dioxygenase activity2.27E-03
45GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.30E-03
46GO:0043424: protein histidine kinase binding2.80E-03
47GO:0004845: uracil phosphoribosyltransferase activity3.05E-03
48GO:0010011: auxin binding3.05E-03
49GO:0010328: auxin influx transmembrane transporter activity3.05E-03
50GO:0010385: double-stranded methylated DNA binding3.05E-03
51GO:0070628: proteasome binding3.05E-03
52GO:0003723: RNA binding3.07E-03
53GO:0030570: pectate lyase activity3.68E-03
54GO:0043621: protein self-association3.77E-03
55GO:0005471: ATP:ADP antiporter activity3.90E-03
56GO:0008725: DNA-3-methyladenine glycosylase activity3.90E-03
57GO:0003785: actin monomer binding3.90E-03
58GO:0080030: methyl indole-3-acetate esterase activity4.83E-03
59GO:0004332: fructose-bisphosphate aldolase activity4.83E-03
60GO:0031593: polyubiquitin binding4.83E-03
61GO:0003924: GTPase activity4.92E-03
62GO:0004656: procollagen-proline 4-dioxygenase activity5.83E-03
63GO:0019900: kinase binding5.83E-03
64GO:0004124: cysteine synthase activity5.83E-03
65GO:0004017: adenylate kinase activity5.83E-03
66GO:0004849: uridine kinase activity5.83E-03
67GO:0004518: nuclease activity6.68E-03
68GO:0008235: metalloexopeptidase activity6.89E-03
69GO:0042162: telomeric DNA binding6.89E-03
70GO:0004427: inorganic diphosphatase activity6.89E-03
71GO:0009881: photoreceptor activity6.89E-03
72GO:0043022: ribosome binding8.02E-03
73GO:0046914: transition metal ion binding9.21E-03
74GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity9.21E-03
75GO:0019843: rRNA binding1.04E-02
76GO:0003747: translation release factor activity1.05E-02
77GO:0030247: polysaccharide binding1.07E-02
78GO:0005525: GTP binding1.10E-02
79GO:0008236: serine-type peptidase activity1.13E-02
80GO:0004805: trehalose-phosphatase activity1.31E-02
81GO:0004673: protein histidine kinase activity1.31E-02
82GO:0050897: cobalt ion binding1.38E-02
83GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.44E-02
84GO:0004177: aminopeptidase activity1.46E-02
85GO:0004161: dimethylallyltranstransferase activity1.46E-02
86GO:0005089: Rho guanyl-nucleotide exchange factor activity1.46E-02
87GO:0000155: phosphorelay sensor kinase activity1.75E-02
88GO:0015266: protein channel activity1.75E-02
89GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity2.24E-02
90GO:0102336: 3-oxo-arachidoyl-CoA synthase activity2.24E-02
91GO:0102337: 3-oxo-cerotoyl-CoA synthase activity2.24E-02
92GO:0031418: L-ascorbic acid binding2.41E-02
93GO:0043130: ubiquitin binding2.41E-02
94GO:0051087: chaperone binding2.59E-02
95GO:0005345: purine nucleobase transmembrane transporter activity2.59E-02
96GO:0003690: double-stranded DNA binding2.72E-02
97GO:0004812: aminoacyl-tRNA ligase activity3.53E-02
98GO:0004402: histone acetyltransferase activity3.73E-02
99GO:0004527: exonuclease activity3.94E-02
100GO:0008536: Ran GTPase binding3.94E-02
101GO:0010181: FMN binding4.14E-02
102GO:0050662: coenzyme binding4.14E-02
103GO:0019901: protein kinase binding4.36E-02
104GO:0016762: xyloglucan:xyloglucosyl transferase activity4.57E-02
105GO:0004871: signal transducer activity4.71E-02
RankGO TermAdjusted P value
1GO:0035452: extrinsic component of plastid membrane0.00E+00
2GO:0042597: periplasmic space0.00E+00
3GO:0009537: proplastid0.00E+00
4GO:0009507: chloroplast9.27E-14
5GO:0009570: chloroplast stroma1.19E-04
6GO:0009513: etioplast9.61E-04
7GO:0005697: telomerase holoenzyme complex9.61E-04
8GO:0009509: chromoplast1.57E-03
9GO:0005578: proteinaceous extracellular matrix1.62E-03
10GO:0032432: actin filament bundle2.27E-03
11GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)3.05E-03
12GO:0009526: plastid envelope3.05E-03
13GO:0009532: plastid stroma3.08E-03
14GO:0055035: plastid thylakoid membrane3.90E-03
15GO:0031209: SCAR complex4.83E-03
16GO:0009986: cell surface6.89E-03
17GO:0031305: integral component of mitochondrial inner membrane8.02E-03
18GO:0009501: amyloplast8.02E-03
19GO:0030529: intracellular ribonucleoprotein complex9.07E-03
20GO:0000784: nuclear chromosome, telomeric region9.21E-03
21GO:0031225: anchored component of membrane9.95E-03
22GO:0009535: chloroplast thylakoid membrane1.33E-02
23GO:0005884: actin filament1.46E-02
24GO:0009941: chloroplast envelope1.53E-02
25GO:0000311: plastid large ribosomal subunit1.60E-02
26GO:0005938: cell cortex1.75E-02
27GO:0016602: CCAAT-binding factor complex1.75E-02
28GO:0009574: preprophase band1.75E-02
29GO:0046658: anchored component of plasma membrane2.25E-02
30GO:0009505: plant-type cell wall2.52E-02
31GO:0015629: actin cytoskeleton3.14E-02
32GO:0005744: mitochondrial inner membrane presequence translocase complex3.33E-02
33GO:0005871: kinesin complex3.53E-02
34GO:0031969: chloroplast membrane3.57E-02
35GO:0005768: endosome3.68E-02
36GO:0009706: chloroplast inner membrane3.74E-02
37GO:0005770: late endosome3.94E-02
38GO:0031965: nuclear membrane4.36E-02
39GO:0005623: cell4.79E-02
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Gene type



Gene DE type