Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G25910

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033587: shikimate biosynthetic process0.00E+00
2GO:0045730: respiratory burst0.00E+00
3GO:0032499: detection of peptidoglycan0.00E+00
4GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
5GO:0071327: cellular response to trehalose stimulus0.00E+00
6GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
7GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
8GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
9GO:1900367: positive regulation of defense response to insect0.00E+00
10GO:0002764: immune response-regulating signaling pathway0.00E+00
11GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
12GO:0060548: negative regulation of cell death6.79E-07
13GO:0006468: protein phosphorylation8.42E-07
14GO:0009697: salicylic acid biosynthetic process1.53E-06
15GO:0031348: negative regulation of defense response1.29E-05
16GO:0010200: response to chitin5.84E-05
17GO:0046777: protein autophosphorylation6.42E-05
18GO:0010150: leaf senescence6.81E-05
19GO:0080142: regulation of salicylic acid biosynthetic process7.90E-05
20GO:0045088: regulation of innate immune response7.90E-05
21GO:0009816: defense response to bacterium, incompatible interaction1.03E-04
22GO:0070588: calcium ion transmembrane transport1.16E-04
23GO:0010225: response to UV-C1.23E-04
24GO:0042742: defense response to bacterium2.70E-04
25GO:0006952: defense response2.84E-04
26GO:0046470: phosphatidylcholine metabolic process3.12E-04
27GO:0006643: membrane lipid metabolic process3.57E-04
28GO:0019673: GDP-mannose metabolic process3.57E-04
29GO:1901183: positive regulation of camalexin biosynthetic process3.57E-04
30GO:0009270: response to humidity3.57E-04
31GO:0032491: detection of molecule of fungal origin3.57E-04
32GO:0042759: long-chain fatty acid biosynthetic process3.57E-04
33GO:0051938: L-glutamate import3.57E-04
34GO:0019567: arabinose biosynthetic process3.57E-04
35GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.57E-04
36GO:0010941: regulation of cell death3.57E-04
37GO:0010421: hydrogen peroxide-mediated programmed cell death3.57E-04
38GO:0007229: integrin-mediated signaling pathway3.57E-04
39GO:0030091: protein repair3.92E-04
40GO:2000031: regulation of salicylic acid mediated signaling pathway4.81E-04
41GO:0009809: lignin biosynthetic process5.51E-04
42GO:0090333: regulation of stomatal closure5.76E-04
43GO:0010271: regulation of chlorophyll catabolic process7.77E-04
44GO:0019725: cellular homeostasis7.77E-04
45GO:0043091: L-arginine import7.77E-04
46GO:0080151: positive regulation of salicylic acid mediated signaling pathway7.77E-04
47GO:0015802: basic amino acid transport7.77E-04
48GO:0010618: aerenchyma formation7.77E-04
49GO:0010115: regulation of abscisic acid biosynthetic process7.77E-04
50GO:0009620: response to fungus8.24E-04
51GO:0006979: response to oxidative stress9.23E-04
52GO:0055046: microgametogenesis1.18E-03
53GO:0016045: detection of bacterium1.26E-03
54GO:0034051: negative regulation of plant-type hypersensitive response1.26E-03
55GO:1900140: regulation of seedling development1.26E-03
56GO:0010359: regulation of anion channel activity1.26E-03
57GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.26E-03
58GO:0045793: positive regulation of cell size1.26E-03
59GO:0010186: positive regulation of cellular defense response1.26E-03
60GO:0048281: inflorescence morphogenesis1.26E-03
61GO:0010498: proteasomal protein catabolic process1.26E-03
62GO:0009266: response to temperature stimulus1.33E-03
63GO:0002679: respiratory burst involved in defense response1.81E-03
64GO:0071323: cellular response to chitin1.81E-03
65GO:0046513: ceramide biosynthetic process1.81E-03
66GO:0046836: glycolipid transport1.81E-03
67GO:0048194: Golgi vesicle budding1.81E-03
68GO:0072334: UDP-galactose transmembrane transport1.81E-03
69GO:0009399: nitrogen fixation1.81E-03
70GO:0072583: clathrin-dependent endocytosis1.81E-03
71GO:0010306: rhamnogalacturonan II biosynthetic process1.81E-03
72GO:0007165: signal transduction1.89E-03
73GO:0009738: abscisic acid-activated signaling pathway2.02E-03
74GO:0051707: response to other organism2.24E-03
75GO:0006542: glutamine biosynthetic process2.44E-03
76GO:0045227: capsule polysaccharide biosynthetic process2.44E-03
77GO:0046345: abscisic acid catabolic process2.44E-03
78GO:0010483: pollen tube reception2.44E-03
79GO:0009652: thigmotropism2.44E-03
80GO:0033358: UDP-L-arabinose biosynthetic process2.44E-03
81GO:0010107: potassium ion import2.44E-03
82GO:0071219: cellular response to molecule of bacterial origin2.44E-03
83GO:0010508: positive regulation of autophagy2.44E-03
84GO:0006470: protein dephosphorylation2.66E-03
85GO:0009625: response to insect2.66E-03
86GO:0009751: response to salicylic acid2.68E-03
87GO:0009617: response to bacterium2.84E-03
88GO:0032957: inositol trisphosphate metabolic process3.11E-03
89GO:0009164: nucleoside catabolic process3.11E-03
90GO:0006486: protein glycosylation3.28E-03
91GO:0010118: stomatal movement3.38E-03
92GO:0018258: protein O-linked glycosylation via hydroxyproline3.85E-03
93GO:1900425: negative regulation of defense response to bacterium3.85E-03
94GO:0046855: inositol phosphate dephosphorylation3.85E-03
95GO:0002238: response to molecule of fungal origin3.85E-03
96GO:0010942: positive regulation of cell death3.85E-03
97GO:0010405: arabinogalactan protein metabolic process3.85E-03
98GO:0010264: myo-inositol hexakisphosphate biosynthetic process3.85E-03
99GO:0009646: response to absence of light3.92E-03
100GO:0009626: plant-type hypersensitive response4.40E-03
101GO:0009612: response to mechanical stimulus4.64E-03
102GO:0010310: regulation of hydrogen peroxide metabolic process4.64E-03
103GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.64E-03
104GO:0042372: phylloquinone biosynthetic process4.64E-03
105GO:0010044: response to aluminum ion5.48E-03
106GO:0010161: red light signaling pathway5.48E-03
107GO:0098869: cellular oxidant detoxification5.48E-03
108GO:0071446: cellular response to salicylic acid stimulus5.48E-03
109GO:1900056: negative regulation of leaf senescence5.48E-03
110GO:0009742: brassinosteroid mediated signaling pathway5.54E-03
111GO:0009787: regulation of abscisic acid-activated signaling pathway6.37E-03
112GO:0001666: response to hypoxia6.51E-03
113GO:0009627: systemic acquired resistance7.28E-03
114GO:0010204: defense response signaling pathway, resistance gene-independent7.30E-03
115GO:0030968: endoplasmic reticulum unfolded protein response7.30E-03
116GO:0009808: lignin metabolic process7.30E-03
117GO:0010099: regulation of photomorphogenesis7.30E-03
118GO:0035556: intracellular signal transduction8.27E-03
119GO:0046916: cellular transition metal ion homeostasis8.29E-03
120GO:0010112: regulation of systemic acquired resistance8.29E-03
121GO:0009051: pentose-phosphate shunt, oxidative branch8.29E-03
122GO:0006098: pentose-phosphate shunt8.29E-03
123GO:0051865: protein autoubiquitination8.29E-03
124GO:0009832: plant-type cell wall biogenesis8.94E-03
125GO:0008202: steroid metabolic process9.31E-03
126GO:1900426: positive regulation of defense response to bacterium9.31E-03
127GO:0048354: mucilage biosynthetic process involved in seed coat development9.31E-03
128GO:0010380: regulation of chlorophyll biosynthetic process9.31E-03
129GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.31E-03
130GO:0010119: regulation of stomatal movement9.85E-03
131GO:0032259: methylation9.91E-03
132GO:0016042: lipid catabolic process1.01E-02
133GO:0007064: mitotic sister chromatid cohesion1.04E-02
134GO:0045087: innate immune response1.08E-02
135GO:0046856: phosphatidylinositol dephosphorylation1.15E-02
136GO:0010105: negative regulation of ethylene-activated signaling pathway1.27E-02
137GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.27E-02
138GO:0008361: regulation of cell size1.27E-02
139GO:0012501: programmed cell death1.27E-02
140GO:0002213: defense response to insect1.27E-02
141GO:0006006: glucose metabolic process1.39E-02
142GO:0009737: response to abscisic acid1.45E-02
143GO:0010540: basipetal auxin transport1.51E-02
144GO:0002237: response to molecule of bacterial origin1.51E-02
145GO:0009409: response to cold1.56E-02
146GO:0006855: drug transmembrane transport1.63E-02
147GO:0090351: seedling development1.64E-02
148GO:0046854: phosphatidylinositol phosphorylation1.64E-02
149GO:0009969: xyloglucan biosynthetic process1.64E-02
150GO:0009225: nucleotide-sugar metabolic process1.64E-02
151GO:0009695: jasmonic acid biosynthetic process2.04E-02
152GO:0003333: amino acid transmembrane transport2.18E-02
153GO:0048511: rhythmic process2.18E-02
154GO:2000022: regulation of jasmonic acid mediated signaling pathway2.33E-02
155GO:0071456: cellular response to hypoxia2.33E-02
156GO:0016226: iron-sulfur cluster assembly2.33E-02
157GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.46E-02
158GO:0006012: galactose metabolic process2.48E-02
159GO:0009611: response to wounding2.58E-02
160GO:0009561: megagametogenesis2.63E-02
161GO:0010584: pollen exine formation2.63E-02
162GO:0019722: calcium-mediated signaling2.63E-02
163GO:0042147: retrograde transport, endosome to Golgi2.79E-02
164GO:0042631: cellular response to water deprivation2.95E-02
165GO:0016567: protein ubiquitination3.02E-02
166GO:0008654: phospholipid biosynthetic process3.44E-02
167GO:0010193: response to ozone3.61E-02
168GO:0000302: response to reactive oxygen species3.61E-02
169GO:0006891: intra-Golgi vesicle-mediated transport3.61E-02
170GO:0002229: defense response to oomycetes3.61E-02
171GO:0009845: seed germination3.64E-02
172GO:0016032: viral process3.78E-02
173GO:0019761: glucosinolate biosynthetic process3.78E-02
174GO:0009630: gravitropism3.78E-02
175GO:0006629: lipid metabolic process3.83E-02
176GO:0030163: protein catabolic process3.96E-02
177GO:0006904: vesicle docking involved in exocytosis4.32E-02
178GO:0009911: positive regulation of flower development4.69E-02
179GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.88E-02
RankGO TermAdjusted P value
1GO:0070191: methionine-R-sulfoxide reductase activity0.00E+00
2GO:2001080: chitosan binding0.00E+00
3GO:0004168: dolichol kinase activity0.00E+00
4GO:0016301: kinase activity1.93E-08
5GO:0004674: protein serine/threonine kinase activity2.53E-08
6GO:0005524: ATP binding1.63E-06
7GO:0019199: transmembrane receptor protein kinase activity7.90E-05
8GO:0005388: calcium-transporting ATPase activity8.09E-05
9GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.23E-04
10GO:0005509: calcium ion binding2.14E-04
11GO:0043531: ADP binding2.38E-04
12GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.41E-04
13GO:0004012: phospholipid-translocating ATPase activity2.41E-04
14GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity3.57E-04
15GO:0008909: isochorismate synthase activity3.57E-04
16GO:0031127: alpha-(1,2)-fucosyltransferase activity3.57E-04
17GO:0032050: clathrin heavy chain binding3.57E-04
18GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity3.57E-04
19GO:0015085: calcium ion transmembrane transporter activity3.57E-04
20GO:0008446: GDP-mannose 4,6-dehydratase activity3.57E-04
21GO:0004630: phospholipase D activity4.81E-04
22GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity4.81E-04
23GO:0019901: protein kinase binding4.97E-04
24GO:0004672: protein kinase activity7.68E-04
25GO:0001671: ATPase activator activity7.77E-04
26GO:0050291: sphingosine N-acyltransferase activity7.77E-04
27GO:0047364: desulfoglucosinolate sulfotransferase activity7.77E-04
28GO:0022821: potassium ion antiporter activity7.77E-04
29GO:0008171: O-methyltransferase activity7.93E-04
30GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.18E-03
31GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity1.26E-03
32GO:0046423: allene-oxide cyclase activity1.26E-03
33GO:0016595: glutamate binding1.26E-03
34GO:0042409: caffeoyl-CoA O-methyltransferase activity1.26E-03
35GO:0004190: aspartic-type endopeptidase activity1.49E-03
36GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity1.81E-03
37GO:0015189: L-lysine transmembrane transporter activity1.81E-03
38GO:0017089: glycolipid transporter activity1.81E-03
39GO:0004445: inositol-polyphosphate 5-phosphatase activity1.81E-03
40GO:0015181: arginine transmembrane transporter activity1.81E-03
41GO:0043424: protein histidine kinase binding2.03E-03
42GO:0033612: receptor serine/threonine kinase binding2.23E-03
43GO:0050373: UDP-arabinose 4-epimerase activity2.44E-03
44GO:0004345: glucose-6-phosphate dehydrogenase activity2.44E-03
45GO:0051861: glycolipid binding2.44E-03
46GO:0005313: L-glutamate transmembrane transporter activity2.44E-03
47GO:0047631: ADP-ribose diphosphatase activity3.11E-03
48GO:0004356: glutamate-ammonia ligase activity3.11E-03
49GO:0045431: flavonol synthase activity3.11E-03
50GO:0010294: abscisic acid glucosyltransferase activity3.11E-03
51GO:0005459: UDP-galactose transmembrane transporter activity3.11E-03
52GO:0005546: phosphatidylinositol-4,5-bisphosphate binding3.11E-03
53GO:0016298: lipase activity3.43E-03
54GO:0000210: NAD+ diphosphatase activity3.85E-03
55GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity3.85E-03
56GO:0035252: UDP-xylosyltransferase activity3.85E-03
57GO:0004605: phosphatidate cytidylyltransferase activity3.85E-03
58GO:1990714: hydroxyproline O-galactosyltransferase activity3.85E-03
59GO:0046872: metal ion binding4.38E-03
60GO:0005515: protein binding4.63E-03
61GO:0003978: UDP-glucose 4-epimerase activity4.64E-03
62GO:0019900: kinase binding4.64E-03
63GO:0008113: peptide-methionine (S)-S-oxide reductase activity4.64E-03
64GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides4.64E-03
65GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity5.48E-03
66GO:0004842: ubiquitin-protein transferase activity5.74E-03
67GO:0005544: calcium-dependent phospholipid binding6.37E-03
68GO:0052747: sinapyl alcohol dehydrogenase activity6.37E-03
69GO:0004714: transmembrane receptor protein tyrosine kinase activity6.37E-03
70GO:0004430: 1-phosphatidylinositol 4-kinase activity7.30E-03
71GO:0008142: oxysterol binding7.30E-03
72GO:0008271: secondary active sulfate transmembrane transporter activity7.30E-03
73GO:0004721: phosphoprotein phosphatase activity7.67E-03
74GO:0004806: triglyceride lipase activity7.67E-03
75GO:0008417: fucosyltransferase activity8.29E-03
76GO:0004722: protein serine/threonine phosphatase activity8.85E-03
77GO:0015238: drug transmembrane transporter activity8.94E-03
78GO:0015174: basic amino acid transmembrane transporter activity9.31E-03
79GO:0004675: transmembrane receptor protein serine/threonine kinase activity9.45E-03
80GO:0016614: oxidoreductase activity, acting on CH-OH group of donors9.85E-03
81GO:0004568: chitinase activity1.04E-02
82GO:0004713: protein tyrosine kinase activity1.04E-02
83GO:0008559: xenobiotic-transporting ATPase activity1.15E-02
84GO:0045551: cinnamyl-alcohol dehydrogenase activity1.27E-02
85GO:0015116: sulfate transmembrane transporter activity1.27E-02
86GO:0008378: galactosyltransferase activity1.27E-02
87GO:0004521: endoribonuclease activity1.27E-02
88GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity1.27E-02
89GO:0015095: magnesium ion transmembrane transporter activity1.39E-02
90GO:0005516: calmodulin binding1.53E-02
91GO:0008146: sulfotransferase activity1.64E-02
92GO:0008061: chitin binding1.64E-02
93GO:0003954: NADH dehydrogenase activity1.90E-02
94GO:0051087: chaperone binding2.04E-02
95GO:0008234: cysteine-type peptidase activity2.09E-02
96GO:0004707: MAP kinase activity2.18E-02
97GO:0010181: FMN binding3.27E-02
98GO:0004197: cysteine-type endopeptidase activity3.78E-02
99GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.32E-02
100GO:0015297: antiporter activity4.42E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.03E-10
2GO:0031304: intrinsic component of mitochondrial inner membrane7.77E-04
3GO:0005901: caveola7.77E-04
4GO:0042406: extrinsic component of endoplasmic reticulum membrane1.26E-03
5GO:0008287: protein serine/threonine phosphatase complex1.26E-03
6GO:0016021: integral component of membrane1.48E-03
7GO:0030176: integral component of endoplasmic reticulum membrane1.49E-03
8GO:0070062: extracellular exosome1.81E-03
9GO:0005737: cytoplasm2.52E-03
10GO:0030173: integral component of Golgi membrane4.64E-03
11GO:0032580: Golgi cisterna membrane5.46E-03
12GO:0030125: clathrin vesicle coat1.04E-02
13GO:0031012: extracellular matrix1.39E-02
14GO:0005887: integral component of plasma membrane1.68E-02
15GO:0005769: early endosome1.77E-02
16GO:0005758: mitochondrial intermembrane space1.90E-02
17GO:0000145: exocyst3.78E-02
18GO:0043231: intracellular membrane-bounded organelle4.32E-02
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Gene type



Gene DE type