GO Enrichment Analysis of Co-expressed Genes with
AT5G25890
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072722: response to amitrole | 0.00E+00 |
| 2 | GO:0071985: multivesicular body sorting pathway | 0.00E+00 |
| 3 | GO:1900057: positive regulation of leaf senescence | 4.38E-05 |
| 4 | GO:0016192: vesicle-mediated transport | 4.69E-05 |
| 5 | GO:1900384: regulation of flavonol biosynthetic process | 1.00E-04 |
| 6 | GO:0010230: alternative respiration | 1.00E-04 |
| 7 | GO:0042964: thioredoxin reduction | 1.00E-04 |
| 8 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 2.36E-04 |
| 9 | GO:0051252: regulation of RNA metabolic process | 2.36E-04 |
| 10 | GO:0044375: regulation of peroxisome size | 3.92E-04 |
| 11 | GO:0072661: protein targeting to plasma membrane | 3.92E-04 |
| 12 | GO:0010272: response to silver ion | 3.92E-04 |
| 13 | GO:0002230: positive regulation of defense response to virus by host | 3.92E-04 |
| 14 | GO:1902290: positive regulation of defense response to oomycetes | 5.64E-04 |
| 15 | GO:0006623: protein targeting to vacuole | 7.34E-04 |
| 16 | GO:0010188: response to microbial phytotoxin | 7.50E-04 |
| 17 | GO:0033356: UDP-L-arabinose metabolic process | 7.50E-04 |
| 18 | GO:0046283: anthocyanin-containing compound metabolic process | 9.47E-04 |
| 19 | GO:0031365: N-terminal protein amino acid modification | 9.47E-04 |
| 20 | GO:0051607: defense response to virus | 1.05E-03 |
| 21 | GO:0010150: leaf senescence | 1.06E-03 |
| 22 | GO:0002238: response to molecule of fungal origin | 1.16E-03 |
| 23 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.16E-03 |
| 24 | GO:0009627: systemic acquired resistance | 1.24E-03 |
| 25 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.30E-03 |
| 26 | GO:0009617: response to bacterium | 1.32E-03 |
| 27 | GO:0009407: toxin catabolic process | 1.58E-03 |
| 28 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.62E-03 |
| 29 | GO:0071669: plant-type cell wall organization or biogenesis | 1.62E-03 |
| 30 | GO:0050829: defense response to Gram-negative bacterium | 1.62E-03 |
| 31 | GO:0015031: protein transport | 1.64E-03 |
| 32 | GO:0043068: positive regulation of programmed cell death | 1.87E-03 |
| 33 | GO:0006605: protein targeting | 1.87E-03 |
| 34 | GO:0006102: isocitrate metabolic process | 1.87E-03 |
| 35 | GO:0016559: peroxisome fission | 1.87E-03 |
| 36 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.87E-03 |
| 37 | GO:0006099: tricarboxylic acid cycle | 1.89E-03 |
| 38 | GO:0019430: removal of superoxide radicals | 2.14E-03 |
| 39 | GO:0051707: response to other organism | 2.32E-03 |
| 40 | GO:0051865: protein autoubiquitination | 2.41E-03 |
| 41 | GO:0010112: regulation of systemic acquired resistance | 2.41E-03 |
| 42 | GO:0009636: response to toxic substance | 2.61E-03 |
| 43 | GO:1900426: positive regulation of defense response to bacterium | 2.70E-03 |
| 44 | GO:0006032: chitin catabolic process | 3.00E-03 |
| 45 | GO:0000272: polysaccharide catabolic process | 3.31E-03 |
| 46 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 3.63E-03 |
| 47 | GO:0012501: programmed cell death | 3.63E-03 |
| 48 | GO:0006629: lipid metabolic process | 3.92E-03 |
| 49 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 3.95E-03 |
| 50 | GO:0030048: actin filament-based movement | 3.95E-03 |
| 51 | GO:0009620: response to fungus | 4.04E-03 |
| 52 | GO:0090351: seedling development | 4.64E-03 |
| 53 | GO:0007033: vacuole organization | 4.64E-03 |
| 54 | GO:0007031: peroxisome organization | 4.64E-03 |
| 55 | GO:0007030: Golgi organization | 4.64E-03 |
| 56 | GO:0006979: response to oxidative stress | 4.78E-03 |
| 57 | GO:0000162: tryptophan biosynthetic process | 5.00E-03 |
| 58 | GO:0080147: root hair cell development | 5.37E-03 |
| 59 | GO:0051302: regulation of cell division | 5.75E-03 |
| 60 | GO:0006874: cellular calcium ion homeostasis | 5.75E-03 |
| 61 | GO:0016998: cell wall macromolecule catabolic process | 6.14E-03 |
| 62 | GO:0009306: protein secretion | 7.35E-03 |
| 63 | GO:0042147: retrograde transport, endosome to Golgi | 7.78E-03 |
| 64 | GO:0006662: glycerol ether metabolic process | 8.65E-03 |
| 65 | GO:0048544: recognition of pollen | 9.10E-03 |
| 66 | GO:0046686: response to cadmium ion | 9.25E-03 |
| 67 | GO:0000302: response to reactive oxygen species | 1.00E-02 |
| 68 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.00E-02 |
| 69 | GO:0009615: response to virus | 1.30E-02 |
| 70 | GO:0009816: defense response to bacterium, incompatible interaction | 1.35E-02 |
| 71 | GO:0006974: cellular response to DNA damage stimulus | 1.40E-02 |
| 72 | GO:0006906: vesicle fusion | 1.40E-02 |
| 73 | GO:0016049: cell growth | 1.51E-02 |
| 74 | GO:0010200: response to chitin | 1.52E-02 |
| 75 | GO:0030244: cellulose biosynthetic process | 1.57E-02 |
| 76 | GO:0009817: defense response to fungus, incompatible interaction | 1.57E-02 |
| 77 | GO:0009832: plant-type cell wall biogenesis | 1.62E-02 |
| 78 | GO:0007568: aging | 1.74E-02 |
| 79 | GO:0045454: cell redox homeostasis | 1.76E-02 |
| 80 | GO:0006886: intracellular protein transport | 1.81E-02 |
| 81 | GO:0034599: cellular response to oxidative stress | 1.91E-02 |
| 82 | GO:0042742: defense response to bacterium | 1.99E-02 |
| 83 | GO:0006887: exocytosis | 2.10E-02 |
| 84 | GO:0016042: lipid catabolic process | 2.11E-02 |
| 85 | GO:0000209: protein polyubiquitination | 2.29E-02 |
| 86 | GO:0009965: leaf morphogenesis | 2.41E-02 |
| 87 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 2.55E-02 |
| 88 | GO:0009846: pollen germination | 2.61E-02 |
| 89 | GO:0009736: cytokinin-activated signaling pathway | 2.75E-02 |
| 90 | GO:0006417: regulation of translation | 2.95E-02 |
| 91 | GO:0048316: seed development | 3.17E-02 |
| 92 | GO:0009626: plant-type hypersensitive response | 3.24E-02 |
| 93 | GO:0016569: covalent chromatin modification | 3.38E-02 |
| 94 | GO:0042545: cell wall modification | 3.46E-02 |
| 95 | GO:0045893: positive regulation of transcription, DNA-templated | 4.40E-02 |
| 96 | GO:0007275: multicellular organism development | 4.59E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008320: protein transmembrane transporter activity | 4.38E-05 |
| 2 | GO:0032266: phosphatidylinositol-3-phosphate binding | 1.00E-04 |
| 3 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.00E-04 |
| 4 | GO:0004649: poly(ADP-ribose) glycohydrolase activity | 1.00E-04 |
| 5 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.00E-04 |
| 6 | GO:0030942: endoplasmic reticulum signal peptide binding | 1.00E-04 |
| 7 | GO:0008428: ribonuclease inhibitor activity | 2.36E-04 |
| 8 | GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity | 2.36E-04 |
| 9 | GO:0052739: phosphatidylserine 1-acylhydrolase activity | 2.36E-04 |
| 10 | GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity | 2.36E-04 |
| 11 | GO:0052691: UDP-arabinopyranose mutase activity | 2.36E-04 |
| 12 | GO:0043169: cation binding | 3.92E-04 |
| 13 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 5.64E-04 |
| 14 | GO:0004791: thioredoxin-disulfide reductase activity | 6.86E-04 |
| 15 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 7.50E-04 |
| 16 | GO:0016866: intramolecular transferase activity | 7.50E-04 |
| 17 | GO:0008374: O-acyltransferase activity | 9.47E-04 |
| 18 | GO:0008948: oxaloacetate decarboxylase activity | 9.47E-04 |
| 19 | GO:0004806: triglyceride lipase activity | 1.30E-03 |
| 20 | GO:0004602: glutathione peroxidase activity | 1.38E-03 |
| 21 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.38E-03 |
| 22 | GO:0008235: metalloexopeptidase activity | 1.62E-03 |
| 23 | GO:0008312: 7S RNA binding | 1.87E-03 |
| 24 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 2.14E-03 |
| 25 | GO:0004364: glutathione transferase activity | 2.23E-03 |
| 26 | GO:0004568: chitinase activity | 3.00E-03 |
| 27 | GO:0004177: aminopeptidase activity | 3.31E-03 |
| 28 | GO:0003774: motor activity | 4.30E-03 |
| 29 | GO:0031624: ubiquitin conjugating enzyme binding | 4.30E-03 |
| 30 | GO:0015035: protein disulfide oxidoreductase activity | 4.55E-03 |
| 31 | GO:0008061: chitin binding | 4.64E-03 |
| 32 | GO:0004970: ionotropic glutamate receptor activity | 4.64E-03 |
| 33 | GO:0005217: intracellular ligand-gated ion channel activity | 4.64E-03 |
| 34 | GO:0043130: ubiquitin binding | 5.37E-03 |
| 35 | GO:0016887: ATPase activity | 6.83E-03 |
| 36 | GO:0016760: cellulose synthase (UDP-forming) activity | 6.94E-03 |
| 37 | GO:0004499: N,N-dimethylaniline monooxygenase activity | 7.35E-03 |
| 38 | GO:0047134: protein-disulfide reductase activity | 7.78E-03 |
| 39 | GO:0004518: nuclease activity | 1.05E-02 |
| 40 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.10E-02 |
| 41 | GO:0061630: ubiquitin protein ligase activity | 1.54E-02 |
| 42 | GO:0005509: calcium ion binding | 1.79E-02 |
| 43 | GO:0004871: signal transducer activity | 1.84E-02 |
| 44 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.86E-02 |
| 45 | GO:0000149: SNARE binding | 1.97E-02 |
| 46 | GO:0050661: NADP binding | 2.03E-02 |
| 47 | GO:0042393: histone binding | 2.03E-02 |
| 48 | GO:0003924: GTPase activity | 2.17E-02 |
| 49 | GO:0005484: SNAP receptor activity | 2.22E-02 |
| 50 | GO:0045330: aspartyl esterase activity | 2.95E-02 |
| 51 | GO:0030599: pectinesterase activity | 3.38E-02 |
| 52 | GO:0016746: transferase activity, transferring acyl groups | 3.61E-02 |
| 53 | GO:0003676: nucleic acid binding | 3.92E-02 |
| 54 | GO:0046910: pectinesterase inhibitor activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 4.38E-05 |
| 2 | GO:0031901: early endosome membrane | 8.98E-05 |
| 3 | GO:0045252: oxoglutarate dehydrogenase complex | 1.00E-04 |
| 4 | GO:0000138: Golgi trans cisterna | 1.00E-04 |
| 5 | GO:0005794: Golgi apparatus | 1.88E-04 |
| 6 | GO:0000814: ESCRT II complex | 2.36E-04 |
| 7 | GO:0042406: extrinsic component of endoplasmic reticulum membrane | 3.92E-04 |
| 8 | GO:0032580: Golgi cisterna membrane | 9.40E-04 |
| 9 | GO:0030173: integral component of Golgi membrane | 1.38E-03 |
| 10 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.14E-03 |
| 11 | GO:0005779: integral component of peroxisomal membrane | 2.14E-03 |
| 12 | GO:0005789: endoplasmic reticulum membrane | 2.26E-03 |
| 13 | GO:0031090: organelle membrane | 2.41E-03 |
| 14 | GO:0030665: clathrin-coated vesicle membrane | 2.70E-03 |
| 15 | GO:0008540: proteasome regulatory particle, base subcomplex | 2.70E-03 |
| 16 | GO:0017119: Golgi transport complex | 3.00E-03 |
| 17 | GO:0005795: Golgi stack | 4.64E-03 |
| 18 | GO:0005769: early endosome | 5.00E-03 |
| 19 | GO:0005770: late endosome | 8.65E-03 |
| 20 | GO:0019898: extrinsic component of membrane | 9.56E-03 |
| 21 | GO:0009504: cell plate | 9.56E-03 |
| 22 | GO:0031965: nuclear membrane | 9.56E-03 |
| 23 | GO:0046658: anchored component of plasma membrane | 1.01E-02 |
| 24 | GO:0005783: endoplasmic reticulum | 1.10E-02 |
| 25 | GO:0071944: cell periphery | 1.10E-02 |
| 26 | GO:0005778: peroxisomal membrane | 1.20E-02 |
| 27 | GO:0000151: ubiquitin ligase complex | 1.57E-02 |
| 28 | GO:0005768: endosome | 1.74E-02 |
| 29 | GO:0031902: late endosome membrane | 2.10E-02 |
| 30 | GO:0031201: SNARE complex | 2.10E-02 |
| 31 | GO:0005886: plasma membrane | 2.45E-02 |
| 32 | GO:0009505: plant-type cell wall | 2.64E-02 |
| 33 | GO:0000502: proteasome complex | 2.75E-02 |
| 34 | GO:0000139: Golgi membrane | 2.90E-02 |
| 35 | GO:0009506: plasmodesma | 3.65E-02 |
| 36 | GO:0016021: integral component of membrane | 3.72E-02 |
| 37 | GO:0005759: mitochondrial matrix | 4.87E-02 |